EWM20703.1, cds9970 (CDS) Nannochloropsis gaditana

Overview
NameEWM20703.1
Unique Namecds9970
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:99497..99576 +
Alignment locationKK037259.1:99691..100090 +
Alignment locationKK037259.1:100628..100798 +
Alignment locationKK037259.1:100881..100913 +

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Properties
Property NameValue
Protein idEWM20703.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101787g1.9941.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:99497..99576 +
KK037259.1supercontigKK037259.1:99691..100090 +
KK037259.1supercontigKK037259.1:100628..100798 +
KK037259.1supercontigKK037259.1:100881..100913 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM20703.1 vs. NCBI_GenBank
Match: gi|585100534|gb|EWM20703.1| (hypothetical protein Naga_101787g1 [Nannochloropsis gaditana])

HSP 1 Score: 466.077 bits (1198), Expect = 3.470e-166
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query:    1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLGLVCVYGLV 227
            MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLGLVCVYGLV
Sbjct:    1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLGLVCVYGLV 227          
BLAST of EWM20703.1 vs. NCBI_GenBank
Match: gi|585101548|gb|EWM21361.1| (hypothetical protein Naga_100666g2 [Nannochloropsis gaditana])

HSP 1 Score: 77.7962 bits (190), Expect = 4.646e-13
Identity = 60/222 (27.03%), Postives = 96/222 (43.24%), Query Frame = 0
Query:    9 FTRVHRE---GDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGV--------VPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLG 219
            F +V RE     +DR +VI+ + IWQ++SI+   DV+ G+   +   + + + D+                     AL      R  RA+E       L + V   M D  +        VP  +  + G   L+Q TN  +D++V GA  +       +T   LL+A L++PDDRS +F     +LF   R      L+K F   G +RL +     V++G
Sbjct:    3 FYKVRREFGSEGIDRRRVIECMRIWQHLSILVGGDVTWGMADKVGRSMGISAVDVE---------------DNASVALGPTRSRRKGRAQEEVAILVRLVDEVR-TMPDYKILARTQHESVPTFLGLLAG-ERLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCILLLAQLVAPDDRSTFFEGFIQALFVPSRCFKSTFLLKWFQGDGDIRLCIVSFRPVKVG 207          
BLAST of EWM20703.1 vs. NCBI_GenBank
Match: gi|553188281|ref|XP_005854767.1| (hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526] >gi|553191620|ref|XP_005855415.1| hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >gi|422293646|gb|EKU20946.1| hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >gi|422294294|gb|EKU21594.1| hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 61.6178 bits (148), Expect = 1.136e-7
Identity = 53/227 (23.35%), Postives = 102/227 (44.93%), Query Frame = 0
Query:    1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLA-----LLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGV---VPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQLG 219
             A+ +LQAF R+   G + R   ++ L +W+ +S +A ADV+ G+   + +  ++ + +L      L  P  P  +  +  Q  +++    AR +             LKE+  +   ++G       L+M +     +    N  +   +  A  L +  L++K I   LMA L +P+DR  +   +   +F  E+     +  K++D  G ++L LH A  ++LG
Sbjct:  104 FAEMYLQAFERLFIAGKIRRDSALRTLKMWEFLSSLAGADVTLGVASHVQKRFNVSAIELEEPMRMLQDP--PSHVRYQRLQQYQSSAASQARTQQ------------LKETEIFKRENEGTRASRASLLMFVTNRSTMWAACNEFHAARLKEATELWDKALQRKLIWSYLMAPLYAPEDRRTYIDNIVEMIFGHEKLTKT-MFFKMYDKDGSVKLCLHTARTIRLG 315          
The following BLAST results are available for this feature:
BLAST of EWM20703.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585100534|gb|EWM20703.1|3.470e-166100.00hypothetical protein Naga_101787g1 [Nannochloropsi... [more]
gi|585101548|gb|EWM21361.1|4.646e-1327.03hypothetical protein Naga_100666g2 [Nannochloropsi... [more]
gi|553188281|ref|XP_005854767.1|1.136e-723.35hypothetical protein NGA_0115602 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10001rna10001Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications