EWM20717.1, cds9958 (CDS) Nannochloropsis gaditana

Overview
NameEWM20717.1
Unique Namecds9958
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:65252..65608 +
Alignment locationKK037259.1:65773..65922 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20717.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100385g5.2319.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:65252..65608 +
KK037259.1supercontigKK037259.1:65773..65922 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20717.1 vs. NCBI_GenBank
Match: gi|585100563|gb|EWM20717.1| (hypothetical protein Naga_100385g5 [Nannochloropsis gaditana])

HSP 1 Score: 335.109 bits (858), Expect = 3.325e-116
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 
Query:    1 MNGCRRGRDLSRLLLLMTLTTLILITGMPRPPVPKPREGAEQRNGTKNGSSAGHNKNHHEAQEQKLQHQTLPPILPPPVVMKSGMGVVGGNKSQKEEDMVAEREALHKLHYGTLVSLLQDDALEVRIGLNSAGMSESSLPSLASGGMEGGRKGGQEGGREVARLHAIG 168
            MNGCRRGRDLSRLLLLMTLTTLILITGMPRPPVPKPREGAEQRNGTKNGSSAGHNKNHHEAQEQKLQHQTLPPILPPPVVMKSGMGVVGGNKSQKEEDMVAEREALHKLHYGTLVSLLQDDALEVRIGLNSAGMSESSLPSLASGGMEGGRKGGQEGGREVARLHAIG
Sbjct:    1 MNGCRRGRDLSRLLLLMTLTTLILITGMPRPPVPKPREGAEQRNGTKNGSSAGHNKNHHEAQEQKLQHQTLPPILPPPVVMKSGMGVVGGNKSQKEEDMVAEREALHKLHYGTLVSLLQDDALEVRIGLNSAGMSESSLPSLASGGMEGGRKGGQEGGREVARLHAIG 168
The following BLAST results are available for this feature:
BLAST of EWM20717.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100563|gb|EWM20717.1|3.325e-116100.00hypothetical protein Naga_100385g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9989rna9989Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications