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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF21 |
| Orig transcript id | gnl|cribi|Naga_100261g2.1652.mrna |
| Orig protein id | gnl|cribi|Naga_100261g2.1652 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037259.1 | supercontig | KK037259.1:3300..4507 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9968 ID=rna9968|Name=rna9968|organism=Nannochloropsis gaditana|type=mRNA|length=852bp
ATGAAGAAAATCCACGAATCGCAAAATACAAAATCGAAATGGACGAACCC
TGCAACTATGGCATGCCGTCGCATCGAAGCAATGAGCAGTGATGAGGAGG
AGGGTGGGGCCAATACAGAGGGGAAGGGAAGCCAAGGCGCAGTAATGATG
GAGCAAGACGACGCCTCCATCTCTTCCTCCTGCACTGGAAGTTGTAATAG
CAGCAGCAGCAGTGACACCGGCGCTGGAGAGGGTGCAGAAGCCTACGAAT
CCGATAGGGTTAATGACTTGGCGGATAGCGATGTGCACGAGGAGGAGGCC
CTGGCCCTGGTAACCGGCGCACTGGACTCTTTGGCCTCTCCTACCCCGTC
TGGTAGAGAGTCTCGCAAACCCGGCGGCGCTCACCCACCCACGCACCCGT
CGTATGATGCGTACGCAGCCTGTGTCGAGACCTTGCGGGGGGTCGCTCAC
TCCCTCGTCGGCAGGCCTGCGGGTTTGGAAGTGTTGAAGAAGCTGCGGTC
CACCCGAGACGCTTTTGCGGCCACGTACCTTCTCCCTGCTGATGCGTGGT
CAGAGTGGGCGCGCGACGAGGCCACCTTGCCGGGAGGCGGGGGAATCAAA
GGTGCGAGGATATTGTTGGAGGAGAAGGCGCTGGTGGATATGCCCGGTTC
CGTGACGCTGCGGCTCGTGCATCTGGCCTTGGTCGAGGACGACGACGGTC
AGAAGGAAGAAGGGGCCGAGGATGGAAGAAATGGAGGAGAGGGGTGCTCG
AACAGGGGAAAGGCTACGGAGGAAGCTGTGCGAAGCGGCAGTTCCTCTGC
TGGAGGGGTGCCGGGTGTTGGAAGCAGAGTGGGACGAATTCGTGGGCGCT
GA back to topprotein sequence of rna9968 >rna9968-protein ID=rna9968-protein|Name=rna9968|organism=Nannochloropsis gaditana|type=polypeptide|length=257bp
MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAP
FCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTR
KPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSS
SMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDT
LDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLAL
GELVPAS back to topmRNA from alignment at KK037259.1:3300..4507+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9968 ID=rna9968|Name=rna9968|organism=Nannochloropsis gaditana|type=mRNA|length=1208bp|location=Sequence derived from alignment at KK037259.1:3300..4507+ (Nannochloropsis gaditana)
ATGTCCTGTTTGTGGGGAATCGTGATCGCCATTTTGAGCTGCGGAATACA
TACATCAGCGTTTCCGCGCGGCGATGATGTAGCTTCCCAATGGATGGACA
AGTGTGAAGCGGTGAGTCTGTCCTCTCTATCCTAAAAAGCATTGTTTCTC
CGAATGCATACCGATCCAaactttttccctttctcccattTGGACTATTC
ATGACCTTTCAACCTGTAATCCAATGTCTCCCGAAGGCTTTAGCGCGTCG
CTACCAGGACTCTCAGGCTGCACCTTTCTGCAATGATTTGCTTCGACACA
TCTTTATCATTGTGTCGCCAAAAATCGGTGATAGAAGTGGAAACTACGAT
CTCGAAGCTGTGGACACGTTGGGCATAGTCATGACAAGCCACAGCTGGac
tgaggagggagcggcggggacgaggaagccaAAACGTCCAGAGCGGCCTG
ACATGCGGGAGGAACCGCAGACGCTGGCATTACCGACGGGACGAAATAAT
GAAGCCAAGGTcgatgagaaagaggaagaaaaaccGTTACCTGGCCGGCG
GTCTTTGAGGGTGAAGCATTCGAGCAGCATGGGGGGGCCCCTGGACACGG
ATAGCAGGGGGTTCTCCGAGTTCAAAGAGTGAGTGcggcgggcgaaggag
gagggcagaaggAATTACCGATAGAAAGGAGATCAGAGGTTGAAGATCCA
CAGCATTGAAATGGGCTCACTCTTGATTGCTCctctgtcttccctcctgc
cttcatcCCGCCTCGTGGCCCCTCAGAGTTAAAGACTTCGTCAACCTGGG
CCTCGCCTTGATCTGCGTCCTGTTCGCTGCCTTAGCCTCGGGGTTGACAA
TCGGGCTCCTTTCCATCGACACGCTGGACTTGGAGATCAAGCAGCGCGCC
GGCACCCCCACGGACAAGCAccacgccgccgccatcctccccctcctcgc
ccaccggcACCTGCTCCTGGTCACGCTCCTTCTGTTCAACTCCATGGCTG
CCGAGGCCCTACCCCTAGCTTTAGGCGAGCTGGTGCCAGGTTACGTGGCT
GTCATCCTCTCGGTTACCGCCGTCCTTTTTTTCGGGGTACGAGGCACTTC
ttgcccttttttcctcccatgtcttccgccctccctcgctttccttctct
atTCCTCTGGGACGGGCGCTTTCTTAAAATTTATAACGATCCTTTTGCAG
CTTCGTAG back to topCoding sequence (CDS) from alignment at KK037259.1:3300..4507+ >rna9968 ID=rna9968|Name=rna9968|organism=Nannochloropsis gaditana|type=CDS|length=3096bp|location=Sequence derived from alignment at KK037259.1:3300..4507+ (Nannochloropsis gaditana)
ATGTCCTGTTTGTGGGGAATCGTGATCGCCATTTTGAGCTGCGGAATACA
TACATCAGCGTTTCCGCGCGGCGATGATGTAGCTTCCCAATGGATGGACA
AGTGTGAAGCGGCTTTAGCGCGTCGCTACCAGGACTCTCAGGCTGCACCT
TTCTGCAATGATTTGCTTCGACACATCTTTATCATTGTGTCGCCAAAAAT
CGGTGATAGAAGTGGAAACTACGATCTCGAAGCTGTGGACACGTTGGGCA
TAGTCATGACAAGCCACAGCTGGactgaggagggagcggcggggacgagg
aagccaAAACGTCCAGAGCGGCCTGACATGCGGGAGGAACCGCAGACGCT
GGCATTACCGACGGGACGAAATAATGAAGCCAAGGTcgatgagaaagagg
aagaaaaaccGTTACCTGGCCGGCGGTCTTTGAGGGTGAAGCATTCGAGC
AGCATGGGGGGGCCCCTGGACACGGATAGCAGGGGGTTCTCCGAGTTCAA
AGAAGTTAAAGACTTCGTCAACCTGGGCCTCGCCTTGATCTGCGTCCTGT
TCGCTGCCTTAGCCTCGGGGTTGACAATCGGGCTCCTTTCCATCGACACG
CTGGACTTGGAGATCAAGCAGCGCGCCGGCACCCCCACGGACAAGCAcca
cgccgccgccatcctccccctcctcgcccaccggcACCTGCTCCTGGTCA
CGCTCCTTCTGTTCAACTCCATGGCTGCCGAGGCCCTACCCCTAGCTTTA
GGCGAGCTGGTGCCAGCTTCGTAGATGTCCTGTTTGTGGGGAATCGTGAT
CGCCATTTTGAGCTGCGGAATACATACATCAGCGTTTCCGCGCGGCGATG
ATGTAGCTTCCCAATGGATGGACAAGTGTGAAGCGGCTTTAGCGCGTCGC
TACCAGGACTCTCAGGCTGCACCTTTCTGCAATGATTTGCTTCGACACAT
CTTTATCATTGTGTCGCCAAAAATCGGTGATAGAAGTGGAAACTACGATC
TCGAAGCTGTGGACACGTTGGGCATAGTCATGACAAGCCACAGCTGGact
gaggagggagcggcggggacgaggaagccaAAACGTCCAGAGCGGCCTGA
CATGCGGGAGGAACCGCAGACGCTGGCATTACCGACGGGACGAAATAATG
AAGCCAAGGTcgatgagaaagaggaagaaaaaccGTTACCTGGCCGGCGG
TCTTTGAGGGTGAAGCATTCGAGCAGCATGGGGGGGCCCCTGGACACGGA
TAGCAGGGGGTTCTCCGAGTTCAAAGAAGTTAAAGACTTCGTCAACCTGG
GCCTCGCCTTGATCTGCGTCCTGTTCGCTGCCTTAGCCTCGGGGTTGACA
ATCGGGCTCCTTTCCATCGACACGCTGGACTTGGAGATCAAGCAGCGCGC
CGGCACCCCCACGGACAAGCAccacgccgccgccatcctccccctcctcg
cccaccggcACCTGCTCCTGGTCACGCTCCTTCTGTTCAACTCCATGGCT
GCCGAGGCCCTACCCCTAGCTTTAGGCGAGCTGGTGCCAGCTTCGTAGAT
GTCCTGTTTGTGGGGAATCGTGATCGCCATTTTGAGCTGCGGAATACATA
CATCAGCGTTTCCGCGCGGCGATGATGTAGCTTCCCAATGGATGGACAAG
TGTGAAGCGGCTTTAGCGCGTCGCTACCAGGACTCTCAGGCTGCACCTTT
CTGCAATGATTTGCTTCGACACATCTTTATCATTGTGTCGCCAAAAATCG
GTGATAGAAGTGGAAACTACGATCTCGAAGCTGTGGACACGTTGGGCATA
GTCATGACAAGCCACAGCTGGactgaggagggagcggcggggacgaggaa
gccaAAACGTCCAGAGCGGCCTGACATGCGGGAGGAACCGCAGACGCTGG
CATTACCGACGGGACGAAATAATGAAGCCAAGGTcgatgagaaagaggaa
gaaaaaccGTTACCTGGCCGGCGGTCTTTGAGGGTGAAGCATTCGAGCAG
CATGGGGGGGCCCCTGGACACGGATAGCAGGGGGTTCTCCGAGTTCAAAG
AAGTTAAAGACTTCGTCAACCTGGGCCTCGCCTTGATCTGCGTCCTGTTC
GCTGCCTTAGCCTCGGGGTTGACAATCGGGCTCCTTTCCATCGACACGCT
GGACTTGGAGATCAAGCAGCGCGCCGGCACCCCCACGGACAAGCAccacg
ccgccgccatcctccccctcctcgcccaccggcACCTGCTCCTGGTCACG
CTCCTTCTGTTCAACTCCATGGCTGCCGAGGCCCTACCCCTAGCTTTAGG
CGAGCTGGTGCCAGCTTCGTAGATGTCCTGTTTGTGGGGAATCGTGATCG
CCATTTTGAGCTGCGGAATACATACATCAGCGTTTCCGCGCGGCGATGAT
GTAGCTTCCCAATGGATGGACAAGTGTGAAGCGGCTTTAGCGCGTCGCTA
CCAGGACTCTCAGGCTGCACCTTTCTGCAATGATTTGCTTCGACACATCT
TTATCATTGTGTCGCCAAAAATCGGTGATAGAAGTGGAAACTACGATCTC
GAAGCTGTGGACACGTTGGGCATAGTCATGACAAGCCACAGCTGGactga
ggagggagcggcggggacgaggaagccaAAACGTCCAGAGCGGCCTGACA
TGCGGGAGGAACCGCAGACGCTGGCATTACCGACGGGACGAAATAATGAA
GCCAAGGTcgatgagaaagaggaagaaaaaccGTTACCTGGCCGGCGGTC
TTTGAGGGTGAAGCATTCGAGCAGCATGGGGGGGCCCCTGGACACGGATA
GCAGGGGGTTCTCCGAGTTCAAAGAAGTTAAAGACTTCGTCAACCTGGGC
CTCGCCTTGATCTGCGTCCTGTTCGCTGCCTTAGCCTCGGGGTTGACAAT
CGGGCTCCTTTCCATCGACACGCTGGACTTGGAGATCAAGCAGCGCGCCG
GCACCCCCACGGACAAGCAccacgccgccgccatcctccccctcctcgcc
caccggcACCTGCTCCTGGTCACGCTCCTTCTGTTCAACTCCATGGCTGC
CGAGGCCCTACCCCTAGCTTTAGGCGAGCTGGTGCCAGCTTCGTAG back to top
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