EWM20735.1, cds9937 (CDS) Nannochloropsis gaditana

Overview
NameEWM20735.1
Unique Namecds9937
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:3300..3410 +
Alignment locationKK037259.1:3536..3927 +
Alignment locationKK037259.1:4076..4338 +
Alignment locationKK037259.1:4500..4507 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20735.1
Productprotein of unknown function DUF21
Orig transcript idgnl|cribi|Naga_100261g2.1652.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:3300..3410 +
KK037259.1supercontigKK037259.1:3536..3927 +
KK037259.1supercontigKK037259.1:4076..4338 +
KK037259.1supercontigKK037259.1:4500..4507 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0019725cellular homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR002550DUF21
Homology
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585100594|gb|EWM20735.1| (protein of unknown function DUF21 [Nannochloropsis gaditana])

HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
Query:    1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPAS 257
            MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPAS
Sbjct:    1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPAS 257          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|553194231|ref|XP_005855914.1| (hypothetical protein NGA_0715620, partial [Nannochloropsis gaditana CCMP526] >gi|422293158|gb|EKU20458.1| hypothetical protein NGA_0715620, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0
Query:    1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256
            MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVP 
Sbjct:    1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPG 256          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|553178140|ref|XP_005852523.1| (hypothetical protein NGA_0715610 [Nannochloropsis gaditana CCMP526] >gi|422296010|gb|EKU23309.1| hypothetical protein NGA_0715610 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0
Query:    1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256
            MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVP 
Sbjct:    1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPG 256          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585108725|gb|EWM26637.1| (protein mam3 [Nannochloropsis gaditana])

HSP 1 Score: 108.997 bits (271), Expect = 1.769e-23
Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 0
Query:  159 DSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256
            D+ G+++ +++  +  LG A++CV+ AA A+GLT+GL+S+D L+LE+K+R GTP ++ HA  I PL+A  H LLVTLLLFNS+A EALP+ L  LVP 
Sbjct:    6 DNAGYADMRDIGSWYQLGGAVVCVICAAFAAGLTVGLMSLDPLELEVKRRVGTPEERKHAEKICPLIAPHHRLLVTLLLFNSIANEALPIFLSGLVPG 103          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585099301|gb|EWM20040.1| (uncharacterized protein Naga_102128g1 [Nannochloropsis gaditana])

HSP 1 Score: 102.834 bits (255), Expect = 1.492e-22
Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 0
Query:  157 DTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGEL 253
            +  S GF+ F +  D +NL  + ICVL AA+A+GLTIGL+SID L+LEIKQR GT  +   A+ +LPL+   H LLVTLLL+NS A E LPL L  L
Sbjct:  175 EMTSGGFASFHDPDDVLNLTFSFICVLCAAIAAGLTIGLMSIDPLELEIKQRVGTAEECRQASVVLPLIQRHHYLLVTLLLYNSAANETLPLFLDRL 271          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|298711109|emb|CBJ32337.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 105.145 bits (261), Expect = 3.826e-22
Identity = 73/198 (36.87%), Postives = 107/198 (54.04%), Query Frame = 0
Query:   95 GAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKP----LPGRRSLRVKHSSSMGG-------PLDTDSR------------------------GFSEFKEVKD-FVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256
             AAG R P   E         TLA  TG + E   +E E   P    L G   + ++ S+++GG       P + ++R                        G  +F +++  +VN+ +  +CV+ A LA+GLT+GLLSI+ L++ IKQR+GTP ++  A+ ILPL++  H LLVTLLLFNS+A EALP+ LG LVP+
Sbjct:  102 AAAGERSPAAAE--------WTLAKLTGVSLEPWHEEAERPDPEGQRLRGAAGVALEGSTAVGGANGNASPPAEAETRGLFEEEENEGGGLGLAGSAGALEFGEEDFLQIESTWVNIAMTSVCVVCAGLAAGLTMGLLSIEPLEMAIKQRSGTPEEQQQASRILPLVSRHHFLLVTLLLFNSLANEALPIFLGNLVPS 291          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585100593|gb|EWM20734.1| (protein of unknown function DUF21 [Nannochloropsis gaditana])

HSP 1 Score: 99.7525 bits (247), Expect = 3.511e-20
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0
Query:  159 DSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256
            DS GF+ F+    +++LGLA  CV+ AA+ASGLTIGL+SI+ L+LEIK+R GT  ++  A  +LPLL  RHLLLVTLLLFN+ AAEALPL L  LVP 
Sbjct:  206 DSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPG 303          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|553194197|ref|XP_005855903.1| (magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293147|gb|EKU20447.1| magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 98.5969 bits (244), Expect = 5.633e-20
Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 0
Query:  159 DSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVP 255
            DS GF+ F+    +++LGLA  CV+ AA+ASGLTIGL+SI+ L+LEIK+R GT  ++  A  +LPLL  RHLLLVTLLLFN+ AAEALPL L  LVP
Sbjct:  191 DSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVP 287          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|747050904|ref|XP_011071536.1| (DUF21 domain-containing protein At4g14240 [Sesamum indicum])

HSP 1 Score: 96.2857 bits (238), Expect = 4.773e-19
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 0
Query:  165 EFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGEL 253
            EF  V  FV  G++ + VLFA + SGLT+GL+S+  +DLEI QR+GTPT+K  AAAILP++  +H LLVTLLL N+ A EALP+ L +L
Sbjct:   29 EFGTVWWFVYAGVSCVLVLFAGIMSGLTLGLMSLGLVDLEILQRSGTPTEKKQAAAILPVVQKQHQLLVTLLLCNAAAMEALPIYLDKL 117          
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|848930548|ref|XP_012828481.1| (PREDICTED: DUF21 domain-containing protein At2g14520 [Erythranthe guttata] >gi|604298312|gb|EYU18356.1| hypothetical protein MIMGU_mgv1a006913mg [Erythranthe guttata])

HSP 1 Score: 93.5893 bits (231), Expect = 2.309e-18
Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0
Query:  168 EVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256
            E + F+++G+ +  VLFA L SGLT+GL+S+  +DLE+  ++GTP DK HAA ILP++ ++HLLL TLL+ N+ A EALP+ L  LV A
Sbjct:    9 ETEFFIHIGVIVFLVLFAGLMSGLTLGLMSMSLVDLEVLAKSGTPKDKQHAAKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLVTA 97          
The following BLAST results are available for this feature:
BLAST of EWM20735.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100594|gb|EWM20735.1|0.000e+0100.00protein of unknown function DUF21 [Nannochloropsis... [more]
gi|553194231|ref|XP_005855914.1|0.000e+099.61hypothetical protein NGA_0715620, partial [Nannoch... [more]
gi|553178140|ref|XP_005852523.1|0.000e+099.61hypothetical protein NGA_0715610 [Nannochloropsis ... [more]
gi|585108725|gb|EWM26637.1|1.769e-2352.04protein mam3 [Nannochloropsis gaditana][more]
gi|585099301|gb|EWM20040.1|1.492e-2254.64uncharacterized protein Naga_102128g1 [Nannochloro... [more]
gi|298711109|emb|CBJ32337.1|3.826e-2236.87conserved unknown protein [Ectocarpus siliculosus][more]
gi|585100593|gb|EWM20734.1|3.511e-2060.20protein of unknown function DUF21 [Nannochloropsis... [more]
gi|553194197|ref|XP_005855903.1|5.633e-2060.82magnesium and cobalt efflux protein, partial [Nann... [more]
gi|747050904|ref|XP_011071536.1|4.773e-1956.18DUF21 domain-containing protein At4g14240 [Sesamum... [more]
gi|848930548|ref|XP_012828481.1|2.309e-1851.69PREDICTED: DUF21 domain-containing protein At2g145... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9968rna9968Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications