EWM20735.1, cds9937 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585100594|gb|EWM20735.1| (protein of unknown function DUF21 [Nannochloropsis gaditana]) HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 Query: 1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPAS 257 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPAS Sbjct: 1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPAS 257
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|553194231|ref|XP_005855914.1| (hypothetical protein NGA_0715620, partial [Nannochloropsis gaditana CCMP526] >gi|422293158|gb|EKU20458.1| hypothetical protein NGA_0715620, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0 Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0 Query: 1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVP Sbjct: 1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPG 256
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|553178140|ref|XP_005852523.1| (hypothetical protein NGA_0715610 [Nannochloropsis gaditana CCMP526] >gi|422296010|gb|EKU23309.1| hypothetical protein NGA_0715610 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0 Query: 1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVP Sbjct: 1 MSCLWGIVIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLLRHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHSSSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPG 256
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585108725|gb|EWM26637.1| (protein mam3 [Nannochloropsis gaditana]) HSP 1 Score: 108.997 bits (271), Expect = 1.769e-23 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 0 Query: 159 DSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256 D+ G+++ +++ + LG A++CV+ AA A+GLT+GL+S+D L+LE+K+R GTP ++ HA I PL+A H LLVTLLLFNS+A EALP+ L LVP Sbjct: 6 DNAGYADMRDIGSWYQLGGAVVCVICAAFAAGLTVGLMSLDPLELEVKRRVGTPEERKHAEKICPLIAPHHRLLVTLLLFNSIANEALPIFLSGLVPG 103
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585099301|gb|EWM20040.1| (uncharacterized protein Naga_102128g1 [Nannochloropsis gaditana]) HSP 1 Score: 102.834 bits (255), Expect = 1.492e-22 Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 0 Query: 157 DTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGEL 253 + S GF+ F + D +NL + ICVL AA+A+GLTIGL+SID L+LEIKQR GT + A+ +LPL+ H LLVTLLL+NS A E LPL L L Sbjct: 175 EMTSGGFASFHDPDDVLNLTFSFICVLCAAIAAGLTIGLMSIDPLELEIKQRVGTAEECRQASVVLPLIQRHHYLLVTLLLYNSAANETLPLFLDRL 271
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|298711109|emb|CBJ32337.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 105.145 bits (261), Expect = 3.826e-22 Identity = 73/198 (36.87%), Postives = 107/198 (54.04%), Query Frame = 0 Query: 95 GAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKP----LPGRRSLRVKHSSSMGG-------PLDTDSR------------------------GFSEFKEVKD-FVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256 AAG R P E TLA TG + E +E E P L G + ++ S+++GG P + ++R G +F +++ +VN+ + +CV+ A LA+GLT+GLLSI+ L++ IKQR+GTP ++ A+ ILPL++ H LLVTLLLFNS+A EALP+ LG LVP+ Sbjct: 102 AAAGERSPAAAE--------WTLAKLTGVSLEPWHEEAERPDPEGQRLRGAAGVALEGSTAVGGANGNASPPAEAETRGLFEEEENEGGGLGLAGSAGALEFGEEDFLQIESTWVNIAMTSVCVVCAGLAAGLTMGLLSIEPLEMAIKQRSGTPEEQQQASRILPLVSRHHFLLVTLLLFNSLANEALPIFLGNLVPS 291
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|585100593|gb|EWM20734.1| (protein of unknown function DUF21 [Nannochloropsis gaditana]) HSP 1 Score: 99.7525 bits (247), Expect = 3.511e-20 Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0 Query: 159 DSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256 DS GF+ F+ +++LGLA CV+ AA+ASGLTIGL+SI+ L+LEIK+R GT ++ A +LPLL RHLLLVTLLLFN+ AAEALPL L LVP Sbjct: 206 DSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPG 303
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|553194197|ref|XP_005855903.1| (magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293147|gb|EKU20447.1| magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 98.5969 bits (244), Expect = 5.633e-20 Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 0 Query: 159 DSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVP 255 DS GF+ F+ +++LGLA CV+ AA+ASGLTIGL+SI+ L+LEIK+R GT ++ A +LPLL RHLLLVTLLLFN+ AAEALPL L LVP Sbjct: 191 DSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVP 287
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|747050904|ref|XP_011071536.1| (DUF21 domain-containing protein At4g14240 [Sesamum indicum]) HSP 1 Score: 96.2857 bits (238), Expect = 4.773e-19 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 0 Query: 165 EFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGEL 253 EF V FV G++ + VLFA + SGLT+GL+S+ +DLEI QR+GTPT+K AAAILP++ +H LLVTLLL N+ A EALP+ L +L Sbjct: 29 EFGTVWWFVYAGVSCVLVLFAGIMSGLTLGLMSLGLVDLEILQRSGTPTEKKQAAAILPVVQKQHQLLVTLLLCNAAAMEALPIYLDKL 117
BLAST of EWM20735.1 vs. NCBI_GenBank
Match: gi|848930548|ref|XP_012828481.1| (PREDICTED: DUF21 domain-containing protein At2g14520 [Erythranthe guttata] >gi|604298312|gb|EYU18356.1| hypothetical protein MIMGU_mgv1a006913mg [Erythranthe guttata]) HSP 1 Score: 93.5893 bits (231), Expect = 2.309e-18 Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0 Query: 168 EVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPA 256 E + F+++G+ + VLFA L SGLT+GL+S+ +DLE+ ++GTP DK HAA ILP++ ++HLLL TLL+ N+ A EALP+ L LV A Sbjct: 9 ETEFFIHIGVIVFLVLFAGLMSGLTLGLMSMSLVDLEVLAKSGTPKDKQHAAKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLVTA 97 The following BLAST results are available for this feature:
BLAST of EWM20735.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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