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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100356g3.1467.mrna |
| Orig protein id | gnl|cribi|Naga_100356g3.1467 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037258.1 | supercontig | KK037258.1:30844..32372 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9936 ID=rna9936|Name=rna9936|organism=Nannochloropsis gaditana|type=mRNA|length=2189bp
TTGACTTCTCGACTTACTATACCAGTACGCTCTCAAATTCATTTCTAACG
GAAGCAAACCAATAGAAGTACAAGCCTGTCTGTTTCTCGTTATAAGTCGG
GTATCAGACACCTCTTTACTTCTTCCACTTTCCTTACTCGTGCGCTTTGT
CCAATGCTCGAATGGCACTAGGATGCTTTCGCCGTAAGATGGATGACCCG
CCGCAGCAACAGCGACTAGTACAACACCAACAACAACGAAAGCAACAAGG
GCGAGGGCAGCAAAAGCACCAGGATCACTCGGTGCAGCAAAGACCGCTAT
GGAGGCACACTCATGTAAAAATGAGAAAGGAAAAGTGCGCTCGGCGGGCT
GAGCTAATCAGGCGCTGCATGGATTTGCAAGCAGCCATCAAGAAGCTGCG
GCCGGAGACTCTAGAAGAATTTCAAGTTCTGGAGAATTACTTGGATCTAT
GGGCCTCCCTCCTCCTTTCCCCTTCCCTTTCTGTCTCCAACGCCCCTGTC
ACTGCCACTTCTTCTCCCAGCCGACCAGCCTCTTCCTCCTCCCTCCCTCC
CTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCCGCACCAT
CTTCACCCATCTTTCCCACCCCGGGACACCAAGTCAAGACTGCCATCCTG
TCTCGATCACCGTCGCGTCCAGCTCCACCCTCCTCCTTCCTCTCTCCCTC
CCCCCCGCCCTCCCTCCCTTCCCTGTCCGCCACACCGAAACCTGCCCCCC
ACCGCCCAACGTCCTCGCCTCGCCCCTCTCACCCCTCCATCTCTTCCCCA
GCCGACACGAGCACGCAACGAAAGGGAAAGTGGCAGGTAAATCGTCCTCT
CGCCTACCCTTTTGGAGAAGTTGGGCGACATTTCAGGGGAGAGGGAAGAT
ATGGGGGAGGAGAGGCGGGCAGCGGCCGAGGTCTGGGAGACTCAGTGGAG
AACGGCCCATATGGGAGATCCTGGAAATCTTCGCAAACCTCGACCTCTGT
GCGGAGGTCGGGTGTAGAAACGGAGAATTCTGTCGGGGTGGCCACCTCCG
GGCAGGGCCCACGGCGACAGGGAGACGGGCAGGCGGAGGCTCGGGAGGCG
CCCCCACCACCCCCACACCCCCCGACCCCAGGGCAGGACGGGCCGACAGA
GGGACGACACCATCAAAGAGAAGGACAGCGACAAGGACAACCAGCGGAAG
TACCGCCCCTGTCATCGGAACCGGCGCCACGACACGCAGCTGCAGGATGG
TCAGAACCTCACCGGGCCACGCACCAGCAATCGTCAAACCAGGGTCATGC
GCCTCCCCCGCCCCTCCCCACCCCCTCCGTCCTCCCCACGCCTGCACGAG
ACGCACAAGATCCTTCCTCCTCTCTTCCCTCTTCCCTTCGCGCCTCTTTC
CCCGCGTCTACCGCCCTTCTGGAAGCGCTCTTGTCCTCCTGCTCTACCTC
ACCTCCTTCCCACCCTCCTCCGCCGCCTCTGCCGCCTCCGCCGCTTTCTA
TCCCTCTTTCCAACCGCCGACCTGCTCCTCCCACATCGCACCCCTCTTTT
CCCTCGCCTTCTCCGCCCTCCTCCTCCCCGGCCCTCTCCGCAGCCCATCC
TTACTCCCAAGCCCTTTCTCCCATGCCCTCGTCTTCCCACGTCGGTAAAA
GTAACGCTTCCAGCCACATTAGTCATGAAGCTTCCTCCCTTACAGCCTCC
CTCACGCCCTTCCAAGGCACTCCCCGACCTTACAAGACTCGACCGCTCCT
TTCCCCTCCCTTTCCGCCATTCCAACGGCAACACGTCCCACCGAGCAAGG
ACGACGGCAGGGAGGGTGAACTCAACAAATCCTAGCAGGAGTCCTTGTTC
TCTGATTATCGGCATTGCCGCGCACTCATAAATGCCACGAGCTGGCTGTG
TGATGGATCTAGAGTGCGGGAGAGGACAGGATTCGGCGTGGAGAATGTGC
GGGAGGGGAGAAAAAAAGATTTGAGCCGAAAGGAAGAGGAAGAGGGACGA
TGCTGAGGTGAGTGAAATCAAGCTAACCGGCTTGGTGAAAAGGGGGATAG
AATAGGAGACAGAGAAGAAATGGACGGACAGGGGACGGGAGGGCGAAAGA
GAATGAATTTTTAAGACCAGCTTGCGTGCTTGCAGCCAGCCCATATTGAG
GATGTATGGATGAAAATAATCAGACCAACATAGGACATC back to topprotein sequence of rna9936 >rna9936-protein ID=rna9936-protein|Name=rna9936|organism=Nannochloropsis gaditana|type=polypeptide|length=240bp
MPAQAVLKQGAAEEEKELKQEMTAMDGDEWEDEGEEEGEGHARSQARAGG
DGVCLLGQYLLGSLFGALAGFVMKRLLFRGLGTGSGRYSRGLMGMDVVVL
HLRAHQYQRRRHSLYPCLPPPPTFITRILVLFASCQTSVVTGAIVLLLRQ
RLAPALLFYSLLRKSHATTEDDGLSLSWMLLQAGLTTATAVKCNGWLQTV
RGKALVGWLIRRGVGERRGEGELEGGRERRVAMTRMEVNV back to topmRNA from alignment at KK037258.1:30844..32372+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9936 ID=rna9936|Name=rna9936|organism=Nannochloropsis gaditana|type=mRNA|length=1529bp|location=Sequence derived from alignment at KK037258.1:30844..32372+ (Nannochloropsis gaditana)
ATGCCTGCCCAGGCAGTGCTTAAACAAGGtgcagcggaagaagagaaaga
actCAAGCAGGAAATGACAGCCATGGATGGAGATGAGtgggaagatgaag
gcgaggaagagggagagggtgcgtAGGGTCGCATCTTTTGCTTAAGCCGA
TAGAACGTGtcgaggggggcggaaaaGGCCGTCAGGGACGGTTAGGTGAA
AGGAAAGGCCAAGGACATggttgaaaaaggaaagaggaaaatagGAGCAT
GGCATTGTCTTGGGTGTAAAATCAGATCTGGCGCTCTGCTGGCTGCTTTT
TGGTGTCGCATGGCGCCGGTACACATCCGTCCCACTTTCTCTTCGCCTTC
ATACCACCAGGCCACGCGCGAAGCCAGGCAagagcgggcggggacggcgt
cTGCCTCTTGGGTCAATACCTTCTCGGCTCCCTCTTCGGCGCCCTAGCCG
GCTTCGTCATGAAGCGCTTGCTCTTTCGCGGCTTGGGCACAGGGTCTGGC
CGGTACTCGAGAGGGTTGATGGGCATGGACGTCGTCGTGGTGAGCgctga
gggaagaggagggaggaggggagggagcgatgaagggagggggcttatga
tgaagaaaaggaagaagggcaagaggaaaggagggaacggggtgGCGCAA
AGCCCATGATACCACCTGCTGATTCCTAGTCTTTGACCCTATCTGCTTTC
GTCGTCCCTGTCGTTCCTcacccccccatcccttctcGCCATATGCCTGT
TCCTCCCAGGGCCTGGTCTGTGGCATTGCCGTCCTCGgtgcctctgcctc
ctccccctcccccacgtccttctttccatcctccccgccacgcAGCTACA
TCTACGCGCCCATCAGTACCAACGCCGCCGTCACTCCCTCTAtccctgtc
tccccccccccccaaccttTATTACCCGCATACTCGTTCTCTTTGCTTCC
TGTCAGACGAGCGTCGTAACGGGGGcgatcgtcctcctcctgcgtcagcg
tctcgctcccgccctccttttctactCGTTACTGCGAAAGAGCCATGCTA
CAAcggtaggaggggaggggggaatgagggagTGAGTGAAAAGAGACAAA
ATATCGAcagaggcggggacggtATTGATCAGCTCCGGAGGCTTTGTGTG
CGCTCCCTTTGCTGATTGCAGCGCCTGGCTGGTGGTGAGGGGGCCAGACG
ATGAAAGTGCTGTTTCCTGCTACATGAGGCCTTAAAACCATGGCGACCTC
ATGAAAAATGTTGCGCGCTTTCTTAAAAACCCATTATCTATTTTACTCTT
CCCTTTGTCACAGGAGGATGATggtctttccctctcctggATGCTTCTCC
AGGCGGGCTTGACGACGGCAACTGCAGTTAAATGCAACGGTTGGCTGCAG
ACTGTGCGAGGGAAAGCACTTGTGGGGTGGTTGATCCGACGAGGGGTTgg
agaaaggcgaggggagggagaattggagggagggagagagagaagggtaG
CCATGACTAGGATGGAAGTGAATGTGTAG back to topCoding sequence (CDS) from alignment at KK037258.1:30844..32372+ >rna9936 ID=rna9936|Name=rna9936|organism=Nannochloropsis gaditana|type=CDS|length=2892bp|location=Sequence derived from alignment at KK037258.1:30844..32372+ (Nannochloropsis gaditana)
ATGCCTGCCCAGGCAGTGCTTAAACAAGGtgcagcggaagaagagaaaga
actCAAGCAGGAAATGACAGCCATGGATGGAGATGAGtgggaagatgaag
gcgaggaagagggagaggGCCACGCGCGAAGCCAGGCAagagcgggcggg
gacggcgtcTGCCTCTTGGGTCAATACCTTCTCGGCTCCCTCTTCGGCGC
CCTAGCCGGCTTCGTCATGAAGCGCTTGCTCTTTCGCGGCTTGGGCACAG
GGTCTGGCCGGTACTCGAGAGGGTTGATGGGCATGGACGTCGTCGTGCTA
CATCTACGCGCCCATCAGTACCAACGCCGCCGTCACTCCCTCTAtccctg
tctccccccccccccaaccttTATTACCCGCATACTCGTTCTCTTTGCTT
CCTGTCAGACGAGCGTCGTAACGGGGGcgatcgtcctcctcctgcgtcag
cgtctcgctcccgccctccttttctactCGTTACTGCGAAAGAGCCATGC
TACAAcgGAGGATGATggtctttccctctcctggATGCTTCTCCAGGCGG
GCTTGACGACGGCAACTGCAGTTAAATGCAACGGTTGGCTGCAGACTGTG
CGAGGGAAAGCACTTGTGGGGTGGTTGATCCGACGAGGGGTTggagaaag
gcgaggggagggagaattggagggagggagagagagaagggtaGCCATGA
CTAGGATGGAAGTGAATGTGTAGATGCCTGCCCAGGCAGTGCTTAAACAA
GGtgcagcggaagaagagaaagaactCAAGCAGGAAATGACAGCCATGGA
TGGAGATGAGtgggaagatgaaggcgaggaagagggagaggGCCACGCGC
GAAGCCAGGCAagagcgggcggggacggcgtcTGCCTCTTGGGTCAATAC
CTTCTCGGCTCCCTCTTCGGCGCCCTAGCCGGCTTCGTCATGAAGCGCTT
GCTCTTTCGCGGCTTGGGCACAGGGTCTGGCCGGTACTCGAGAGGGTTGA
TGGGCATGGACGTCGTCGTGCTACATCTACGCGCCCATCAGTACCAACGC
CGCCGTCACTCCCTCTAtccctgtctccccccccccccaaccttTATTAC
CCGCATACTCGTTCTCTTTGCTTCCTGTCAGACGAGCGTCGTAACGGGGG
cgatcgtcctcctcctgcgtcagcgtctcgctcccgccctccttttctac
tCGTTACTGCGAAAGAGCCATGCTACAAcgGAGGATGATggtctttccct
ctcctggATGCTTCTCCAGGCGGGCTTGACGACGGCAACTGCAGTTAAAT
GCAACGGTTGGCTGCAGACTGTGCGAGGGAAAGCACTTGTGGGGTGGTTG
ATCCGACGAGGGGTTggagaaaggcgaggggagggagaattggagggagg
gagagagagaagggtaGCCATGACTAGGATGGAAGTGAATGTGTAGATGC
CTGCCCAGGCAGTGCTTAAACAAGGtgcagcggaagaagagaaagaactC
AAGCAGGAAATGACAGCCATGGATGGAGATGAGtgggaagatgaaggcga
ggaagagggagaggGCCACGCGCGAAGCCAGGCAagagcgggcggggacg
gcgtcTGCCTCTTGGGTCAATACCTTCTCGGCTCCCTCTTCGGCGCCCTA
GCCGGCTTCGTCATGAAGCGCTTGCTCTTTCGCGGCTTGGGCACAGGGTC
TGGCCGGTACTCGAGAGGGTTGATGGGCATGGACGTCGTCGTGCTACATC
TACGCGCCCATCAGTACCAACGCCGCCGTCACTCCCTCTAtccctgtctc
cccccccccccaaccttTATTACCCGCATACTCGTTCTCTTTGCTTCCTG
TCAGACGAGCGTCGTAACGGGGGcgatcgtcctcctcctgcgtcagcgtc
tcgctcccgccctccttttctactCGTTACTGCGAAAGAGCCATGCTACA
AcgGAGGATGATggtctttccctctcctggATGCTTCTCCAGGCGGGCTT
GACGACGGCAACTGCAGTTAAATGCAACGGTTGGCTGCAGACTGTGCGAG
GGAAAGCACTTGTGGGGTGGTTGATCCGACGAGGGGTTggagaaaggcga
ggggagggagaattggagggagggagagagagaagggtaGCCATGACTAG
GATGGAAGTGAATGTGTAGATGCCTGCCCAGGCAGTGCTTAAACAAGGtg
cagcggaagaagagaaagaactCAAGCAGGAAATGACAGCCATGGATGGA
GATGAGtgggaagatgaaggcgaggaagagggagaggGCCACGCGCGAAG
CCAGGCAagagcgggcggggacggcgtcTGCCTCTTGGGTCAATACCTTC
TCGGCTCCCTCTTCGGCGCCCTAGCCGGCTTCGTCATGAAGCGCTTGCTC
TTTCGCGGCTTGGGCACAGGGTCTGGCCGGTACTCGAGAGGGTTGATGGG
CATGGACGTCGTCGTGCTACATCTACGCGCCCATCAGTACCAACGCCGCC
GTCACTCCCTCTAtccctgtctccccccccccccaaccttTATTACCCGC
ATACTCGTTCTCTTTGCTTCCTGTCAGACGAGCGTCGTAACGGGGGcgat
cgtcctcctcctgcgtcagcgtctcgctcccgccctccttttctactCGT
TACTGCGAAAGAGCCATGCTACAAcgGAGGATGATggtctttccctctcc
tggATGCTTCTCCAGGCGGGCTTGACGACGGCAACTGCAGTTAAATGCAA
CGGTTGGCTGCAGACTGTGCGAGGGAAAGCACTTGTGGGGTGGTTGATCC
GACGAGGGGTTggagaaaggcgaggggagggagaattggagggagggaga
gagagaagggtaGCCATGACTAGGATGGAAGTGAATGTGTAG back to top
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