rna9902, rna9902 (mRNA) Nannochloropsis gaditana

Overview
Namerna9902
Unique Namerna9902
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length965
Alignment locationKK037257.1:90441..91779 -

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Properties
Property NameValue
ProductRubredoxin domain protein
Orig transcript idgnl|cribi|Naga_100935g2.5898.mrna
Orig protein idgnl|cribi|Naga_100935g2.5898
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:90441..91779 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100935g2gene9609Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9902rna9902-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20802.1cds9871Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9902 ID=rna9902|Name=rna9902|organism=Nannochloropsis gaditana|type=mRNA|length=965bp
TCTTTAGGGTACTCTGCACATTTTTTGGCACCACCTAAGGTAGATCTCCA
CACCCACTGCCATTCAGTCGGAATTTGTTTTTCATGGGGGAACAGGAGGG
GAGATGCGAGGTGTACCCTGCGTCTGTCATAAAGGAGGCATAGAAATGAA
TGATGGATGAGGTTGTGCCCACTTGCAAATGACTTTCTTCAACTCCTGGG
GCTTCATTTAATTCCTGACCTCCCGTTCCCGTCCATTTCACACGTGTGAA
TCGGTACAGAGGCATGCGTCCGCAAGCGCCGTGGCGGAGTCCCCTTCCTT
TCTCGCTGCCTCCCAATGTCGTCGTCCTTGTGCTCCTCCTCCTATGCTGC
CGTCCGCTCACTGGGAAAGAAGCCAAGGAGGCCGCGGAAGGCAGCTCGAC
GCCCATGGACGCCGGGAAGGAGCATGTGCGTCCCCTAGGGTTGACCTCGA
CGGGGCCGGAAGGGAAAGAGTCGGAGCCGCTCAATTTTTTGTACGAGCAA
ATGAAGAGCCAAGCGGAGCTGTTGAAGGAGGGCTACGCGTGCTTTGTGAC
AGGAGAATGCATAGCGTGCTCCGCGGAGGAGATGAGTCAAGCCTTTTGTC
AAACGAGTAAACGCCGGGAGGAGGTTACCTGCGAGCGGGAGGAAGTCGTG
GACGGAGCCACCCACATGAGGACTTACACCACTTACTCCGCCTGTGCTCG
CACCTCGTCGGACAGTCTGGTAGAGGTGCTGCGGTTTCAAGCCGCGATGG
CCACGGTGGGCGGCTTGGCATTTTACGGCGCGAGGCACCAGAAAGTGAAG
CATTTGACATTGTACGAACGGAGGACCGGGGCGGGAAGGTGAGGGAGGGA
AGGAGGGAGGGAGGGAGGGCGGGAGGACGGAGGAGCGGATGAAGAGATGG
GGGAGAAAGGTTTGTACATACGTCTTTTTCACATAGATACGGCGTGGCAC
GGAGAGAGGGAGGGA
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protein sequence of rna9902

>rna9902-protein ID=rna9902-protein|Name=rna9902|organism=Nannochloropsis gaditana|type=polypeptide|length=149bp
MARHAPFTVLTFVCLVLMALSSVAFMPVRPALSLSKMRAATLSGPSSRSP
SGRSKGLTAMSGKYWEGEWVCADCGYIYNEADCGGMRFEDQKTGFKCPQC
SAPRRRFAKKVGDKIGVTNDGGDAPILVFSIVGGLAVIGFGIYAALSGI
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mRNA from alignment at KK037257.1:90441..91779-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9902 ID=rna9902|Name=rna9902|organism=Nannochloropsis gaditana|type=mRNA|length=1339bp|location=Sequence derived from alignment at KK037257.1:90441..91779- (Nannochloropsis gaditana)
ATACACCCCTTTCATGGACGTCTAAGCTACATGCGTTTTCCCGTTCCCCG
CCACAATTTCCTCTAACCACCAAAGCCTAGCAAGGAACCAGTCAAACTAA
ATTGAAAGGATGGCGCGTCACGCTCCCTTCACTGTCTTAACCTTCGTCTG
CCTCGTGCTAATGGCCCTCTCCTCCGTCGCCTTCATGCCTGTGCGCCCTG
CCCTTTCTTTGAGTAAAATGCGCGCTGCAACACTCTCGGGACCTTCCTCC
CGCAGCCCTAGCGGCCGCTCCAAGGGACTGACAGCAATGTCTGGGAAATA
CTGGGAGGGAGAATGGGTGTGCGCGGACTGTGGGTACATTTACAACGAAG
CGGTACGTTGGGTTGGGGGAAGAGAGAGAGGGAGGGACCGTCCGACTCCG
CCCATGGCATACTTCTTGTCCTTGATGGAAACCTTTTCATTGCTACTTGA
GCCTTCGCCTTTGCTTACACTCTTGCTCCCTCATCAATGCCTGCGCCTCA
TTCGACCAGGATTGCGGCGGGATGCGTTTCGAAGACCAAAAGACGGGCTT
CAAATGCCCGCAATGCTCGGCTCCCCGTCGGCGGTTCGCGAAAAAAGTCG
GGGACAAAATCGGGGTCACCAACGACGGAGGAGACGCGCCCATCCTCGTC
TTCTCCATCGTGGGAGGCCTGGCGGTGATCGGCTTTGGCATCTACGCGGC
CCTTTCCGGGGTAGGTGGATCGCGAAGCACAAGGGAGGACGTGGCTGTTT
GTTTATTTTATTTTGTTTTTTTGGTTGGATTATTTTTTTCCTCGTTACAG
GCCACGAGGGTATGAAGATTCCCCCGTTGATCGGGGTAACTTATCATCGT
GCCTTCCTTTCCTCACGTGCTGGATTGTGATCGGACCGGGTGACTTCCCA
CAATGTACCCCAGGACGCGTCAGACTCACCGCCACACTTCCCTCTCCCCT
TCTCACTCTCGCAGATTTAAATTTAAACGCACATTTAAATTCAAAAAGAG
CGTTACGGAGGCCTCCTGCAGGCATTTACAAATCCCTCTGGAAGGAGAAA
GGACAGGGTTCAACTCGAGGGGGGCGGCCGTGGCAGGCGAGAAAAATGGC
GCGAACGCACGCACGCCGTCTTGAATGAGAGGGTATGGAGGCATCACATC
CATTGCATTGGATGTGGTGAGATTGAAAAGATTGAAAAGGATGCCATAGC
AGGGCTCCAGATAGAAGAAGAGTGGGAGTCTGTGCAGTTGAAAACGGGTC
ATGTTGGAGAGGGGGGGACCAGGAGAAGGCTTCTTCAGAGAAATCTGAGA
GGAGGAAAAAAAGAAAACACAAACCACATGACATAGGTC
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Coding sequence (CDS) from alignment at KK037257.1:90441..91779-

>rna9902 ID=rna9902|Name=rna9902|organism=Nannochloropsis gaditana|type=CDS|length=1350bp|location=Sequence derived from alignment at KK037257.1:90441..91779- (Nannochloropsis gaditana)
ATTTAAGATTGCGGCGGGATGCGTTTCGAAGACCAAAAGACGGGCTTCAA
ATGCCCGCAATGCTCGGCTCCCCGTCGGCGGTTCGCGAAAAAAGTCGGGG
ACAAAATCGGGGTCACCAACGACGGAGGAGACGCGCCCATCCTCGTCTTC
TCCATCGTGGGAGGCCTGGCGGTGATCGGCTTTGGCATCTACGCGGCCCT
TTCCGGGATGGCGCGTCACGCTCCCTTCACTGTCTTAACCTTCGTCTGCC
TCGTGCTAATGGCCCTCTCCTCCGTCGCCTTCATGCCTGTGCGCCCTGCC
CTTTCTTTGAGTAAAATGCGCGCTGCAACACTCTCGGGACCTTCCTCCCG
CAGCCCTAGCGGCCGCTCCAAGGGACTGACAGCAATGTCTGGGAAATACT
GGGAGGGAGAATGGGTGTGCGCGGACTGTGGGTACATTTACAACGAAGCG
ATTTAAGATTGCGGCGGGATGCGTTTCGAAGACCAAAAGACGGGCTTCAA
ATGCCCGCAATGCTCGGCTCCCCGTCGGCGGTTCGCGAAAAAAGTCGGGG
ACAAAATCGGGGTCACCAACGACGGAGGAGACGCGCCCATCCTCGTCTTC
TCCATCGTGGGAGGCCTGGCGGTGATCGGCTTTGGCATCTACGCGGCCCT
TTCCGGGATGGCGCGTCACGCTCCCTTCACTGTCTTAACCTTCGTCTGCC
TCGTGCTAATGGCCCTCTCCTCCGTCGCCTTCATGCCTGTGCGCCCTGCC
CTTTCTTTGAGTAAAATGCGCGCTGCAACACTCTCGGGACCTTCCTCCCG
CAGCCCTAGCGGCCGCTCCAAGGGACTGACAGCAATGTCTGGGAAATACT
GGGAGGGAGAATGGGTGTGCGCGGACTGTGGGTACATTTACAACGAAGCG
ATTTAAGATTGCGGCGGGATGCGTTTCGAAGACCAAAAGACGGGCTTCAA
ATGCCCGCAATGCTCGGCTCCCCGTCGGCGGTTCGCGAAAAAAGTCGGGG
ACAAAATCGGGGTCACCAACGACGGAGGAGACGCGCCCATCCTCGTCTTC
TCCATCGTGGGAGGCCTGGCGGTGATCGGCTTTGGCATCTACGCGGCCCT
TTCCGGGATGGCGCGTCACGCTCCCTTCACTGTCTTAACCTTCGTCTGCC
TCGTGCTAATGGCCCTCTCCTCCGTCGCCTTCATGCCTGTGCGCCCTGCC
CTTTCTTTGAGTAAAATGCGCGCTGCAACACTCTCGGGACCTTCCTCCCG
CAGCCCTAGCGGCCGCTCCAAGGGACTGACAGCAATGTCTGGGAAATACT
GGGAGGGAGAATGGGTGTGCGCGGACTGTGGGTACATTTACAACGAAGCG
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Synonyms
Publications