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Properties
| Property Name | Value |
|---|
| Product | proline glycine betaine transporter |
| Orig transcript id | gnl|cribi|Naga_100496g3.5228.mrna |
| Orig protein id | gnl|cribi|Naga_100496g3.5228 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:276457..278608 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9857 ID=rna9857|Name=rna9857|organism=Nannochloropsis gaditana|type=mRNA|length=1715bp
CCCCGACCCCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTCCTGGCCTC
GGAGCAACGCGTCCTGTCGAGCCTTTACCTCGCCACGGACCACCTCTTAG
CTGGTCGAAAACGGAACGCCCTCTGCTTCGTCCCCTCCTCCTCCCCCACA
GCCACGTCTTCCTCCCACCACTTGGTGGGGCCCACTGGCTACCTGCCCCC
GCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTGCTCAACCCGGTGGCGG
CCGCCGCTGCTCGGGCCTCAGAGCGCTACGACCGGGTGGCGGTGGTCTCC
CTCCATGAAAAGCGCGCGAAAGGGACGGAGGATTGCTTAAGGTGGGTGCA
ACAAGGACGTACGACGCACGGGATCATCCAGGTCTTTTCCCTCTTTGGGG
AAGCGGGAGGGGAGGAAGGGAGGGAGGGCGGGGCAGAGGATGGGGTCCAC
GGCTTCAGCCTGGCGCCAGGACGGGAGGAGGGCGGGAAGGAAGGTGGGAG
GGAGGAAGCGGTACGGCGGACGGTGGAAGAAGCCTTCCTTCCCCGCCTCC
AAGCCTATTCCCCTCAATTTATGTTCCTGTCGTGGGGCTTGGAACTGGTG
GGAAAGCCCGGGAAGGGAGGGGGATGGAAGGGGAAGGAGGTCGGGCGGGT
GACCCAGCAGGTCTTGCGCGCCATGGATGCCTGTGGAGGGGGAAAGGTGA
TAGTGGTGGTGGAGGGAGCGGGAGAGGGCGGGAAGGAGGAAGAGGAGGCG
GTGCTGAGCGTGGTCGGGGCCTTACTGGACCCGGGCCGGGAGGAGGAGGA
AGGGAGGGAGGAAGGGAGGGAGGGCGGGAAGGAGGGCGTAGGGGAGGGCG
GGGGTGTACAGACGACCCTGGAGTGCCGGACGAGCCAATGAGAGGCAAAG
TGCAAGCGGCAAATGCGAGCAAGCGGCAGGAGCTCTGGTGGCATCCGCCA
TGGGGAAAGGCAAGTCTCGGATCATCCTCCCGGGGCGAAGCTACACTGTA
AACTCCCAGGAGAGTCCTCCGAGGGTACCCGGTTGTGGGGACGAAACGAT
GTGGGGACGAAACGGGGGCCCAGCCGACTCGGTGGCGGGAGGTACAGAGG
AGGACGATATAAAAAGGTAAAATTTCCAAAGCACTAGGCCAGCCACCGGC
ACAATATATAAATAAATAAATACTGCGATCCACATATGCAAAGAAGGTGT
AAACCCGGGAGGGCTAGGGAGGGTCAGAGGGAGAAGTAGCATGAAAGCGC
AGGGCAATGAAACGCGTGGGGGAAACCCGAAAACCAACCAAGAATCGACG
GCCGTGGTATCGTGCGCGGGAAGGAAAAGAGGGGGAGGGTGTTGAGAAAT
TTAAAGTCGTGGTCATTCTGTGAGTATGTGTCCCCCGTGGAGAGAAGGAG
CGAATTTAAAGCTAAACTACCTGACAGCATTGCTGTTGTTGCCTCCCTTG
CCATGCTCGGTTTGGGCAGTTTGAGTCCATGCCCGGGAGCTGTCTCCTAG
GAGGCCATCGCCCACGTGAACAAGCGAATCGATACAAATTATGATCCCGT
CGGCCCCTTTCAGCCCAACTGATGACAAAAAGCCAGGCTTCTATTCACGT
TTATTTAATTTTTAGAAAGCGCACGCAAGAAGCAAAACCCTGCAAGCTTA
TTGCTCATACATATATATTGGATGTAAAGAGCAAGTTTGTCCGGTGGCGA
CACCTTCATCCCTCC back to topprotein sequence of rna9857 >rna9857-protein ID=rna9857-protein|Name=rna9857|organism=Nannochloropsis gaditana|type=polypeptide|length=336bp
MDFSAYGFFAEEIGQAFFPPSTSSTVRLIRSFAVFSGAFLFRPIGGLFFG
WLGDTYSKKHALVLSLSLMALATTGVGFLPPYSSIHILSPILLTLLRLLQ
GFSVGGQLVGTMVFVAHHAFQPPPPLPSSSSSGSSPFRPSPPPSSLQGFY
GDLRASSTEGQHLAVDLVAPSPLPPTGSPHADVGPPSGISTQAAPRDKDR
EDREEDENPIGAVFHEHLLEIVLGIGVTALWCGGVYQCYIWMPTYLTVLA
PHAPVPALFGGTVSVVATALVKTNGGLGPEWLLMGTALLSSGCLVMGWRP
TGIVARRKRRGRNAWKALMLAMKSMATTCPAARAEV back to topmRNA from alignment at KK037256.1:276457..278608- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9857 ID=rna9857|Name=rna9857|organism=Nannochloropsis gaditana|type=mRNA|length=2152bp|location=Sequence derived from alignment at KK037256.1:276457..278608- (Nannochloropsis gaditana)
ATGGATTTCAGGTAAGCTTTTTCCGACCTCAACTTTTCTGTTATCACTCG
CTAGCTTTACATTTTCGATTCAGCACGAGGTGTTCAGACAACTCACAAAT
GCATACACGAGCGAGATTTTGAAGAGACAAGAACAAACATTACATGCGAT
GGACCTTGCAGGCAGGGATACTTCCTAAGAAGATGCGTGCATAATCAAGG
CATTGCTCCCGGCATGCCCAATATGGACGACACTTTAAAACATCTCCTTT
TACTGAAATATAAGGCAACTGCTCCCTAACACCTGCGTTTTGTCTTGACC
ATCCTCACAGCGCCTACGGCTTTTTTGCCGAAGAGATCGGCCAGGCATTC
TTCCCTCCTTCCACCTCTTCCACCGTTCGGCTCATCCGATCCTTCGCCGT
CTTTTCTGGTGCTTTTTTATTCCGTCCAATCGGCGGCCTTTTTTTCGGGT
GGCTGGGAGACACTTACAGCAAGAAACACGCCCTCGTTTTGTCCCTCTCC
CTGATGGCCCTGGCCACCACAGGCGTCGGTTTCCTCCCCCCCTACTCCTC
GATTCACATACTTTCTCCTATCCTGCTTACCCTGCTTCGTCTCCTGCAAG
GCTTTTCAGTGGGCGGGCAACTCGTCGGCACCATGGTTTTCGTCGCACAC
CATGCCTTCCAGCCCCCTCCGCCCCTTCCCTCAAGCTCTTCCTCTGGTTC
ATCGCCCTTCCGTCCCTCTCCCCCTCCATCCTCCCTGCAAGGATTCTACG
GGGGTATGGTCGTCTTTGCGGGGACGCTCGGCCTCGTTTTTGGCGCCTTC
CTCTCTTTCCTTCTTTTACCACTTCCTTCCCCACACCTTCCTCCGGACCT
GGGGCTTCCGGATCCCTTTTTTGATGGGCGTGGCCGTCGGACCTGCGGCC
TACTTCCTCCACCGCGACATCCCCACAGACCTTCGGGCCAGTAGCACTGA
AGGCCAGCATCTTGCGGTCGATTTGGTGGCTCCGTCTCCTCTGCCCCCCA
CCGGGTCTCCCCATGCGGACGTCGGTCCACCGTCGGGCATTTCCACCCAG
GCGGCCCCGAGGGATAAAGACCGAGAGGACAGGGAGGAAGACGAGAACCC
TATCGGAGCCGTTTTTCACGAGCACTTGCTCGAGATTGTCCTGGGCATAG
GGGTGACAGCTCTGTGGTGCGGAGGTAAGGAGGGGGAAATCCCAGGCAGC
GCCTTTAGGGTGTATAAACGTCTTCATACATTGAAGGCCCGCTTTCTATA
CGCCGCTTCAACTATCTGTTTCTTGCGCTGTCCCTCCTTCCCTCCCTTCC
CAACCTCTTGCCAAGGCGTCTACCAATGCTACATCTGGATGCCCACCTAC
CTGACCGTGCTGGCCCCGCACGCTCCGGTTCCGGGTACCTTTTCCATCAC
TACCGCTTGGTTGGTCCTGTTCACCTGCCTCCTGCCCGTCTCGGGGCATC
TGGCCGACCGTTTAGGGTTCTATCCCGTCATGCTCACTGGAGGTAGAGTC
CCTTCCCCCCCCCCCTCCCCCTCGTTTTGCTCGCCCTACCCGTCCAATCT
TCTTCCTTGGTTGATTTTCCCGCCCCACCTTGTGTCCTTCCGTGTCCTTG
TCCCTCATGCCTCGCCTCCCCTCCCACCGCCGACCCGATGTCTTCCCCAT
CCCCGTCCTCCGTCGCCCCCTTCTTGGCTTTACAGGTCTCATCACCGCTT
TGACGGCCTGGCCTACGTTTTCCCTCCTTCGCCTCGGCCATCCCCTCGCC
ACCTCCTTCGCGCCAATTTTCTATACTGTGGGCCTCTCTCTTTTCGGCGG
CCCCATCCCATATTTCCTCACGGTGCATGCCACACCCTCCTCCTCCCTCC
CTCCCTCCCTCCCTCCCCATCTCTTCACGTCCGTCTCGATCATCTACAAC
TTCACCCAAGCCTTGTTCGGGGGAACGGTCAGCGTCGTGGCCACGGCGCT
GGTGAAGACGAACGGGGGCCTGGGGCCCGAATGGCTCTTGATGGGGACGG
CCTTGTTGTCCTCCGGGTGCCTGGTCATGGGCTGGAGGCCCACTGGCATC
GTCGCTCGGCGAAAACGGAGAGGACGGAACGCGTGGAAGGCGCTAATGCT
TGCCATGAAGAGCATGGCGACCACATGCCCTGCGGCGAGGGCGGAGGTCT
AG back to topCoding sequence (CDS) from alignment at KK037256.1:276457..278608- >rna9857 ID=rna9857|Name=rna9857|organism=Nannochloropsis gaditana|type=CDS|length=5055bp|location=Sequence derived from alignment at KK037256.1:276457..278608- (Nannochloropsis gaditana)
CCTTGTTCGGGGGAACGGTCAGCGTCGTGGCCACGGCGCTGGTGAAGACG
AACGGGGGCCTGGGGCCCGAATGGCTCTTGATGGGGACGGCCTTGTTGTC
CTCCGGGTGCCTGGTCATGGGCTGGAGGCCCACTGGCATCGTCGCTCGGC
GAAAACGGAGAGGACGGAACGCGTGGAAGGCGCTAATGCTTGCCATGAAG
AGCATGGCGACCACATGCCCTGCGGCGAGGGCGGAGGTCTAGGCGTCTAC
CAATGCTACATCTGGATGCCCACCTACCTGACCGTGCTGGCCCCGCACGC
TCCGGTTCCGGACCTTCGGGCCAGTAGCACTGAAGGCCAGCATCTTGCGG
TCGATTTGGTGGCTCCGTCTCCTCTGCCCCCCACCGGGTCTCCCCATGCG
GACGTCGGTCCACCGTCGGGCATTTCCACCCAGGCGGCCCCGAGGGATAA
AGACCGAGAGGACAGGGAGGAAGACGAGAACCCTATCGGAGCCGTTTTTC
ACGAGCACTTGCTCGAGATTGTCCTGGGCATAGGGGTGACAGCTCTGTGG
TGCGGAGCGCCTACGGCTTTTTTGCCGAAGAGATCGGCCAGGCATTCTTC
CCTCCTTCCACCTCTTCCACCGTTCGGCTCATCCGATCCTTCGCCGTCTT
TTCTGGTGCTTTTTTATTCCGTCCAATCGGCGGCCTTTTTTTCGGGTGGC
TGGGAGACACTTACAGCAAGAAACACGCCCTCGTTTTGTCCCTCTCCCTG
ATGGCCCTGGCCACCACAGGCGTCGGTTTCCTCCCCCCCTACTCCTCGAT
TCACATACTTTCTCCTATCCTGCTTACCCTGCTTCGTCTCCTGCAAGGCT
TTTCAGTGGGCGGGCAACTCGTCGGCACCATGGTTTTCGTCGCACACCAT
GCCTTCCAGCCCCCTCCGCCCCTTCCCTCAAGCTCTTCCTCTGGTTCATC
GCCCTTCCGTCCCTCTCCCCCTCCATCCTCCCTGCAAGGATTCTACGGGG
ATGGATTTCAGCCTTGTTCGGGGGAACGGTCAGCGTCGTGGCCACGGCGC
TGGTGAAGACGAACGGGGGCCTGGGGCCCGAATGGCTCTTGATGGGGACG
GCCTTGTTGTCCTCCGGGTGCCTGGTCATGGGCTGGAGGCCCACTGGCAT
CGTCGCTCGGCGAAAACGGAGAGGACGGAACGCGTGGAAGGCGCTAATGC
TTGCCATGAAGAGCATGGCGACCACATGCCCTGCGGCGAGGGCGGAGGTC
TAGGCGTCTACCAATGCTACATCTGGATGCCCACCTACCTGACCGTGCTG
GCCCCGCACGCTCCGGTTCCGGACCTTCGGGCCAGTAGCACTGAAGGCCA
GCATCTTGCGGTCGATTTGGTGGCTCCGTCTCCTCTGCCCCCCACCGGGT
CTCCCCATGCGGACGTCGGTCCACCGTCGGGCATTTCCACCCAGGCGGCC
CCGAGGGATAAAGACCGAGAGGACAGGGAGGAAGACGAGAACCCTATCGG
AGCCGTTTTTCACGAGCACTTGCTCGAGATTGTCCTGGGCATAGGGGTGA
CAGCTCTGTGGTGCGGAGCGCCTACGGCTTTTTTGCCGAAGAGATCGGCC
AGGCATTCTTCCCTCCTTCCACCTCTTCCACCGTTCGGCTCATCCGATCC
TTCGCCGTCTTTTCTGGTGCTTTTTTATTCCGTCCAATCGGCGGCCTTTT
TTTCGGGTGGCTGGGAGACACTTACAGCAAGAAACACGCCCTCGTTTTGT
CCCTCTCCCTGATGGCCCTGGCCACCACAGGCGTCGGTTTCCTCCCCCCC
TACTCCTCGATTCACATACTTTCTCCTATCCTGCTTACCCTGCTTCGTCT
CCTGCAAGGCTTTTCAGTGGGCGGGCAACTCGTCGGCACCATGGTTTTCG
TCGCACACCATGCCTTCCAGCCCCCTCCGCCCCTTCCCTCAAGCTCTTCC
TCTGGTTCATCGCCCTTCCGTCCCTCTCCCCCTCCATCCTCCCTGCAAGG
ATTCTACGGGGATGGATTTCAGCCTTGTTCGGGGGAACGGTCAGCGTCGT
GGCCACGGCGCTGGTGAAGACGAACGGGGGCCTGGGGCCCGAATGGCTCT
TGATGGGGACGGCCTTGTTGTCCTCCGGGTGCCTGGTCATGGGCTGGAGG
CCCACTGGCATCGTCGCTCGGCGAAAACGGAGAGGACGGAACGCGTGGAA
GGCGCTAATGCTTGCCATGAAGAGCATGGCGACCACATGCCCTGCGGCGA
GGGCGGAGGTCTAGGCGTCTACCAATGCTACATCTGGATGCCCACCTACC
TGACCGTGCTGGCCCCGCACGCTCCGGTTCCGGACCTTCGGGCCAGTAGC
ACTGAAGGCCAGCATCTTGCGGTCGATTTGGTGGCTCCGTCTCCTCTGCC
CCCCACCGGGTCTCCCCATGCGGACGTCGGTCCACCGTCGGGCATTTCCA
CCCAGGCGGCCCCGAGGGATAAAGACCGAGAGGACAGGGAGGAAGACGAG
AACCCTATCGGAGCCGTTTTTCACGAGCACTTGCTCGAGATTGTCCTGGG
CATAGGGGTGACAGCTCTGTGGTGCGGAGCGCCTACGGCTTTTTTGCCGA
AGAGATCGGCCAGGCATTCTTCCCTCCTTCCACCTCTTCCACCGTTCGGC
TCATCCGATCCTTCGCCGTCTTTTCTGGTGCTTTTTTATTCCGTCCAATC
GGCGGCCTTTTTTTCGGGTGGCTGGGAGACACTTACAGCAAGAAACACGC
CCTCGTTTTGTCCCTCTCCCTGATGGCCCTGGCCACCACAGGCGTCGGTT
TCCTCCCCCCCTACTCCTCGATTCACATACTTTCTCCTATCCTGCTTACC
CTGCTTCGTCTCCTGCAAGGCTTTTCAGTGGGCGGGCAACTCGTCGGCAC
CATGGTTTTCGTCGCACACCATGCCTTCCAGCCCCCTCCGCCCCTTCCCT
CAAGCTCTTCCTCTGGTTCATCGCCCTTCCGTCCCTCTCCCCCTCCATCC
TCCCTGCAAGGATTCTACGGGGATGGATTTCAGCCTTGTTCGGGGGAACG
GTCAGCGTCGTGGCCACGGCGCTGGTGAAGACGAACGGGGGCCTGGGGCC
CGAATGGCTCTTGATGGGGACGGCCTTGTTGTCCTCCGGGTGCCTGGTCA
TGGGCTGGAGGCCCACTGGCATCGTCGCTCGGCGAAAACGGAGAGGACGG
AACGCGTGGAAGGCGCTAATGCTTGCCATGAAGAGCATGGCGACCACATG
CCCTGCGGCGAGGGCGGAGGTCTAGGCGTCTACCAATGCTACATCTGGAT
GCCCACCTACCTGACCGTGCTGGCCCCGCACGCTCCGGTTCCGGACCTTC
GGGCCAGTAGCACTGAAGGCCAGCATCTTGCGGTCGATTTGGTGGCTCCG
TCTCCTCTGCCCCCCACCGGGTCTCCCCATGCGGACGTCGGTCCACCGTC
GGGCATTTCCACCCAGGCGGCCCCGAGGGATAAAGACCGAGAGGACAGGG
AGGAAGACGAGAACCCTATCGGAGCCGTTTTTCACGAGCACTTGCTCGAG
ATTGTCCTGGGCATAGGGGTGACAGCTCTGTGGTGCGGAGCGCCTACGGC
TTTTTTGCCGAAGAGATCGGCCAGGCATTCTTCCCTCCTTCCACCTCTTC
CACCGTTCGGCTCATCCGATCCTTCGCCGTCTTTTCTGGTGCTTTTTTAT
TCCGTCCAATCGGCGGCCTTTTTTTCGGGTGGCTGGGAGACACTTACAGC
AAGAAACACGCCCTCGTTTTGTCCCTCTCCCTGATGGCCCTGGCCACCAC
AGGCGTCGGTTTCCTCCCCCCCTACTCCTCGATTCACATACTTTCTCCTA
TCCTGCTTACCCTGCTTCGTCTCCTGCAAGGCTTTTCAGTGGGCGGGCAA
CTCGTCGGCACCATGGTTTTCGTCGCACACCATGCCTTCCAGCCCCCTCC
GCCCCTTCCCTCAAGCTCTTCCTCTGGTTCATCGCCCTTCCGTCCCTCTC
CCCCTCCATCCTCCCTGCAAGGATTCTACGGGGATGGATTTCAGCCTTGT
TCGGGGGAACGGTCAGCGTCGTGGCCACGGCGCTGGTGAAGACGAACGGG
GGCCTGGGGCCCGAATGGCTCTTGATGGGGACGGCCTTGTTGTCCTCCGG
GTGCCTGGTCATGGGCTGGAGGCCCACTGGCATCGTCGCTCGGCGAAAAC
GGAGAGGACGGAACGCGTGGAAGGCGCTAATGCTTGCCATGAAGAGCATG
GCGACCACATGCCCTGCGGCGAGGGCGGAGGTCTAGGCGTCTACCAATGC
TACATCTGGATGCCCACCTACCTGACCGTGCTGGCCCCGCACGCTCCGGT
TCCGGACCTTCGGGCCAGTAGCACTGAAGGCCAGCATCTTGCGGTCGATT
TGGTGGCTCCGTCTCCTCTGCCCCCCACCGGGTCTCCCCATGCGGACGTC
GGTCCACCGTCGGGCATTTCCACCCAGGCGGCCCCGAGGGATAAAGACCG
AGAGGACAGGGAGGAAGACGAGAACCCTATCGGAGCCGTTTTTCACGAGC
ACTTGCTCGAGATTGTCCTGGGCATAGGGGTGACAGCTCTGTGGTGCGGA
GCGCCTACGGCTTTTTTGCCGAAGAGATCGGCCAGGCATTCTTCCCTCCT
TCCACCTCTTCCACCGTTCGGCTCATCCGATCCTTCGCCGTCTTTTCTGG
TGCTTTTTTATTCCGTCCAATCGGCGGCCTTTTTTTCGGGTGGCTGGGAG
ACACTTACAGCAAGAAACACGCCCTCGTTTTGTCCCTCTCCCTGATGGCC
CTGGCCACCACAGGCGTCGGTTTCCTCCCCCCCTACTCCTCGATTCACAT
ACTTTCTCCTATCCTGCTTACCCTGCTTCGTCTCCTGCAAGGCTTTTCAG
TGGGCGGGCAACTCGTCGGCACCATGGTTTTCGTCGCACACCATGCCTTC
CAGCCCCCTCCGCCCCTTCCCTCAAGCTCTTCCTCTGGTTCATCGCCCTT
CCGTCCCTCTCCCCCTCCATCCTCCCTGCAAGGATTCTACGGGGATGGAT
TTCAG back to top
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