EWM20892.1, cds9779 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|585100843|gb|EWM20892.1| (peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 368.237 bits (944), Expect = 4.883e-129 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 1 MADPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDVKRLKVEVTECGEL 178 MADPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDVKRLKVEVTECGEL Sbjct: 1 MADPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDVKRLKVEVTECGEL 178
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|553190073|ref|XP_005855120.1| (peptidyl-prolyl isomerase H (cyclophilin H) [Nannochloropsis gaditana CCMP526] >gi|422293939|gb|EKU21239.1| peptidyl-prolyl isomerase H (cyclophilin H) [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 364.77 bits (935), Expect = 1.164e-127 Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0 Query: 1 MADPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDVKRLKVEVTECGEL 178 MAD AVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRE+GLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDVKRLKVEVTECGEL Sbjct: 1 MADSAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRESGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDVKRLKVEVTECGEL 178
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|299116363|emb|CBN74628.1| (peptidyl-prolyl cis-trans isomerase 11 [Ectocarpus siliculosus]) HSP 1 Score: 289.656 bits (740), Expect = 8.195e-98 Identity = 137/181 (75.69%), Postives = 150/181 (82.87%), Query Frame = 0 Query: 3 DPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178 DPA+ EAV RGNPVVF DV+I PAGRIKMELFKD PKT ENFR+FCTGE+R G+P GYKG+PFHRVIKDFM+QGGDF+KGDG+G SIYG+KFADENFDLRHTGPGLLSMANSGPNTNGCQFF+T K WLDG HVVFGKVLDPASMLTVRK+EN RL V + ECGEL Sbjct: 5 DPAIAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 185
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|813111264|ref|XP_012195150.1| (peptidyl-prolyl cis-trans isomerase H [Saprolegnia parasitica CBS 223.65] >gi|641540637|gb|KDO34419.1| peptidyl-prolyl cis-trans isomerase H [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 266.929 bits (681), Expect = 5.958e-89 Identity = 128/181 (70.72%), Postives = 145/181 (80.11%), Query Frame = 0 Query: 3 DPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178 DPA+ EAV RGNPVVF DV++ N P GRIKMELFK PKTVENFRQFCTGEYR +P GYKGS FHRVI DFMIQGGDF+KGDG+G SIYGDKFADE+F +HT PGLLSMANSG +TNGCQFFITC C+WLDGKHVVFGK+LDPAS+L +RK+E+ + V +TECGEL Sbjct: 2 DPALSEAVRRGNPVVFFDVALGNAPLGRIKMELFKRECPKTVENFRQFCTGEYRRGDMPTGYKGSHFHRVIPDFMIQGGDFLKGDGTGRMSIYGDKFADESFAYKHTEPGLLSMANSGVDTNGCQFFITCAPCDWLDGKHVVFGKLLDPASLLVMRKIESVQTGAANKPKTPVTITECGEL 182
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|301103378|ref|XP_002900775.1| (flagellar peptidyl-prolyl cis-trans isomerase [Phytophthora infestans T30-4] >gi|262101530|gb|EEY59582.1| flagellar peptidyl-prolyl cis-trans isomerase [Phytophthora infestans T30-4]) HSP 1 Score: 265.388 bits (677), Expect = 2.531e-88 Identity = 124/181 (68.51%), Postives = 148/181 (81.77%), Query Frame = 0 Query: 3 DPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178 D A+ EA+ RGNPVVF D+SI P GR+++ELFK P+TVENFRQFCTGEYR++ LP+GYKG PFHRVIKDFM+QGGDF+KGDG+G SIYGDKF DE+F +HT PGLLSMANSGP TNGCQFF+TC C+WLDGKHVVFGKVLDPAS+L +RK+E+ V +L + +TECGEL Sbjct: 2 DAALSEALRRGNPVVFFDISIGGAPVGRLRLELFKRDCPRTVENFRQFCTGEYRKSELPVGYKGCPFHRVIKDFMVQGGDFLKGDGTGRISIYGDKFEDESFAHKHTEPGLLSMANSGPGTNGCQFFLTCAPCDWLDGKHVVFGKVLDPASLLLLRKMESVPVGPNSKPKLTITITECGEL 182
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|669163152|ref|XP_008617138.1| (peptidyl-prolyl cis-trans isomerase H [Saprolegnia diclina VS20] >gi|530731129|gb|EQC29371.1| peptidyl-prolyl cis-trans isomerase H [Saprolegnia diclina VS20]) HSP 1 Score: 263.848 bits (673), Expect = 1.253e-87 Identity = 125/181 (69.06%), Postives = 144/181 (79.56%), Query Frame = 0 Query: 3 DPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178 DP + EA+ RGNPVVF DV++ N P GRIKMELFK PKTVENFRQFCTGEYR +P GYKGS FHR+I DFMIQGGDF+KGDG+G SIYGDKFADE+F +HT PGLLSMANSG +TNGCQFFITC C+WLDGKHVVFGK+LDPAS+L +RK+E+ + V +TECGEL Sbjct: 2 DPVLSEALRRGNPVVFFDVALGNAPLGRIKMELFKRECPKTVENFRQFCTGEYRRGDMPTGYKGSHFHRIIPDFMIQGGDFLKGDGTGRMSIYGDKFADESFAYKHTEPGLLSMANSGVDTNGCQFFITCAPCDWLDGKHVVFGKLLDPASLLVMRKIESVQTGAANKPKTPVTITECGEL 182
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|675174165|ref|XP_008895967.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566013474|gb|ETI36385.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567950889|gb|ETK76596.1| hypothetical protein L915_17028 [Phytophthora parasitica] >gi|567979554|gb|ETL30032.1| hypothetical protein L916_16924 [Phytophthora parasitica] >gi|568009052|gb|ETL83264.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568038967|gb|ETM36481.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568103614|gb|ETN18271.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570317139|gb|ETO65087.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570940955|gb|ETP06212.1| hypothetical protein F441_17363 [Phytophthora parasitica CJ01A1] >gi|570971206|gb|ETP34325.1| hypothetical protein F442_17345 [Phytophthora parasitica P10297]) HSP 1 Score: 262.307 bits (669), Expect = 4.323e-87 Identity = 123/181 (67.96%), Postives = 147/181 (81.22%), Query Frame = 0 Query: 3 DPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178 D A+ EA+ RGNPVVF D+SI P GR+++ELFK P+TVENFRQFCTGEYR++ LP+GYKG FHRVIKDFM+QGGDF+KGDG+G SIYGDKF DE+F +HT PGLLSMANSGP TNGCQFF+TC C+WLDGKHVVFGKVLDPAS+L +RK+E+ V +L + +TECGEL Sbjct: 2 DAALNEALRRGNPVVFFDISIGGAPVGRLRLELFKKDCPRTVENFRQFCTGEYRKSELPVGYKGCTFHRVIKDFMVQGGDFLKGDGTGRISIYGDKFEDESFAHKHTEPGLLSMANSGPGTNGCQFFLTCAPCDWLDGKHVVFGKVLDPASLLLLRKMESVPVGPNSKPKLSITITECGEL 182
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|294886353|ref|XP_002771683.1| (cyclophilin, putative [Perkinsus marinus ATCC 50983] >gi|239875389|gb|EER03499.1| cyclophilin, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 260.381 bits (664), Expect = 3.579e-86 Identity = 124/182 (68.13%), Postives = 143/182 (78.57%), Query Frame = 0 Query: 2 ADPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178 A P N NPVVF+DVS+ GRI+MEL+KDV PKTVENFRQ CTGE++ G+P+GYKGS FHRVI+DFMIQGGDF+KGDG+G SIYG+KF DENF L H PGLLSMANSGPNTNGCQFFITC+KC+WLD KHVVFGKVLD SM+TVRK+EN V +L + V+ECGEL Sbjct: 11 AIPMHRPVRNPENPVVFMDVSVGGSAIGRIRMELYKDVAPKTVENFRQLCTGEFKLNGVPIGYKGSTFHRVIRDFMIQGGDFVKGDGTGSLSIYGEKFPDENFKLAHDSPGLLSMANSGPNTNGCQFFITCNKCDWLDSKHVVFGKVLDQQSMMTVRKIENAQVGENSRPKLPITVSECGEL 192
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|294880891|ref|XP_002769177.1| (cyclophilin, putative [Perkinsus marinus ATCC 50983] >gi|239872380|gb|EER01895.1| cyclophilin, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 258.84 bits (660), Expect = 1.507e-85 Identity = 123/182 (67.58%), Postives = 142/182 (78.02%), Query Frame = 0 Query: 2 ADPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178 A P N NPVVF+DVS+ GRI+MEL+KDV PKTVENFRQ C GE++ G+P+GYKGS FHRVI+DFMIQGGDF+KGDG+G SIYG+KF DENF L H PGLLSMANSGPNTNGCQFFITC+KC+WLD KHVVFGKVLD SM+TVRK+EN V +L + V+ECGEL Sbjct: 14 AIPMHRPVRNPENPVVFMDVSVGGSAIGRIRMELYKDVAPKTVENFRQLCNGEFKLNGVPIGYKGSTFHRVIRDFMIQGGDFVKGDGTGSLSIYGEKFPDENFKLAHDSPGLLSMANSGPNTNGCQFFITCNKCDWLDSKHVVFGKVLDQQSMMTVRKIENAQVGENSRPKLPITVSECGEL 195
BLAST of EWM20892.1 vs. NCBI_GenBank
Match: gi|673023730|ref|XP_008865826.1| (hypothetical protein H310_03647 [Aphanomyces invadans] >gi|574479054|gb|ETW06049.1| hypothetical protein H310_03647 [Aphanomyces invadans]) HSP 1 Score: 258.07 bits (658), Expect = 2.137e-85 Identity = 122/181 (67.40%), Postives = 145/181 (80.11%), Query Frame = 0 Query: 3 DPAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRETGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENT-----DVKRLKVEVTECGEL 178 DP + EA+ +GN VVF D+++ P GRI+MELFK+ PKTVENFRQFCTGEYR+ LP+GYKGS FHRVI+DFM+QGGDF+KGDG+G SIYGDKFADENF +HT GL+SMANSGP TNGCQFFITC CEWLDGKHVVFGK+LD AS+L +RK+E+ + R V +TECGEL Sbjct: 2 DPLLAEALRKGNVVVFFDIALGGAPLGRIRMELFKNDCPKTVENFRQFCTGEYRKNELPVGYKGSTFHRVIQDFMVQGGDFLKGDGTGRMSIYGDKFADENFRHKHTEAGLVSMANSGPGTNGCQFFITCGACEWLDGKHVVFGKLLDSASLLVMRKIESVPTGQNNKPRTPVIITECGEL 182 The following BLAST results are available for this feature:
BLAST of EWM20892.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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