rna9791, rna9791 (mRNA) Nannochloropsis gaditana

Overview
Namerna9791
Unique Namerna9791
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2827
Alignment locationKK037256.1:118509..118886 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100061g2.8559.mrna
Orig protein idgnl|cribi|Naga_100061g2.8559
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:118509..118886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100061g2gene9506Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9791rna9791-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20926.1cds9760Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9791 ID=rna9791|Name=rna9791|organism=Nannochloropsis gaditana|type=mRNA|length=2827bp
ATGGGCACTTACCCCGTGCCTGCAACCATCACAACAACGGTGCTCTCATA
CGTGGGCTCTCCGGTTGCAGGGCACCTTTCTGTGGTCTCTGGTGTTCGTG
ACGCCTGTGGCGCGGGCGTCGGGCATTCGCAAGGAGCAGGAAACGTTCTT
CTCCGCAACTTGCCTTGCACTCGTCGAGGAGAACATATCCATAAAGATTT
GCAGGCGGGAGCGTAATTTCGGGAAACACCAACCCATTCGTTGAACACAA
TCGCAACAGGATGTCAGCGCCTAAACTGAGCAACACCACGCATGGATTGC
ACTCACAAAATGCACGCGCGCCTAGGCCCGTGTCATCGTTTCGGGCTGAC
CGAGGGGCCCCGGGCCCGGGCCTCCCTCCCCCTCCGCCCCCCTCTCCGAG
TGGCTCGAGCCAGAAACTCTTACCCACACGTCAGTCCGTTGACAAGGGAG
GAAATGGCGTCACTGAGGGTGGTGAGGGAAAGGACTCCCTGTGTGGTGAC
ACACACGAGGCGCACGCCGCCCCCGCAGCTGGCCCGACTTCTCGCTCAAA
CCAGCATTCATTTCAATATACACCCGCAGCATCTACTTCGGATGCCACGT
CTTGTGAACTTTCTCCCTCGGTGCCTGGGCACTATTCGCAGCCGTCCACC
TTGGCGGTGTCCGCTGGCTCTGCCGGGTCGCACCAGAGGCCTCCCTCTCA
GTCCCCGCAGGGTGCGAACGAGACCGCGCATCCTCCGAACTACCCTTTAT
CAACGCACCTCCCAGAGCATGAAAGCAATACCTCCAGGCCCTTGTCGTCG
GACGCGGCGAGCGAGTACGGCGATGGTCCAGGTGGGGCACGCACCGAGTC
GGGGATGTGGCCCATGCCCCCTTCAGGGACGGTGGGTGTGAAGAGAAGGA
GGGAGAGCGTGCGGGGTAGATGGACGGCCGAGGAGCACGAGGCATTCCTG
CGAGGACTTCGGGTGTACGGGCGGGAGTGGAAGCGGGTGGCGGCAGACAT
CAAGACACGGAGCAGCGCTCAGATCCGGTCGCACGCCCAGAAGTACTTCG
CCAAACTTGCCAAGGCGCGCGGGATGGCGGGGATGACGCACGCGGGGGGC
ATGGCTCTGGATTCAGAGGGGTCGGGCATGCTTCTCGGGTCGGAGGAGCC
TTCAGGGGACGGCGCGGGATCGGTTAGACGGCTCCATGGCGTCCCCTCCT
TACCCACCGGGGCCCACCATCGGCACCCCCGCGGGCAGGAAGTGCCATCC
CCGGGCACCTACACCGCCTTCTCAAGGGGCGGGGGGCCGCACGACGTCAG
CCTGGCCTACGCGCACTATGGTCTCGCCCAGCACGGACAGATGAGGTCAG
GGCTAGGGCTACCGGATCCGTACCCAGCGTATGCACCCTACCCTCTCCAG
GCGCCGACGCCGGCTCCGCCCCAACAGGTGCTTCCCCGGGCCGAGGAGGC
CGCCCTTCGAAGGGAGGTCGGGAAAGTGCTGGTCAAGCTTAAGGCGAGGC
GCGAGGCGATGCTGGTGGCGGGCGGGGACAGGGAGCAGAGGCCGAGATTT
GAGCGCTCGGGGGGCGACAAGTGGGGGGAGGCGGACGAGGGGGAGACGAC
GCCAGGGGCGCGCGGGGCACTAGCGGGCCCGAGGCCGGGCGTGGCATCAG
GCCGCGAGGGTGCGGGGCGGGAGGAGCCAGGACAGCAGGAGCGGGTTTGG
CGGTATGACGACGGGCAGCGAGGAGGGTTCGGGGCGACGGGACAGGAGGG
CCCATACGGAGGGCGCGGGCAGGATCCGAGGCCGCCAGGCGCGTCTCATA
GTGCTTTCGGAAGGGGGGAAGGCCTGAAGACTACCGAGCCGGCGTCTTTC
GCTCATGGGGGCGCGCCTCCTCTCTCTCTTGGACAGCTGTCTTCGAATGA
CCCCAGACAGCCTCCGCAGGGAGCCTCCGCCCGCCCGCGTTCGGCCTCCT
CCTCCTGCACCCTCCTCCCTGCCTCCATCCCTTCTTCCTTTTCGTCCGCT
CCTCCCCTCTGTACCGGTGAGTCCGTGGCGACGGAGCGCGAGGAGGAAAA
AGAAGGACAGACAGACGAGGACATGGGCCCGGAGGAGGCAACCGGGGTGG
GGCCGCGGCGGGTCGAGTGAGCCGGACCCCGGTGGGTGCACAGCGGAGGG
CATCAGAAATGTGAGAGGTTGTGGAATGGCACGTTAGGAAGATGGAAGGC
AAGGTAGCGTCAGCCTGTGACGCGGTACCGGAGGATCGAGAACGGAAGAC
GAGCAACGGCTGAGGCCGGGAGTGGCGCACGGGGGCCCTTCCAAGGCGAC
AGCGCTTATGCGCCAGAGCCGTAAGGCCACGGCGTTGCGCACGGATTCAT
CGAGTCGTGTAACGGTATTTGGGTTCACTTCCTTAGCTTAGCAGGGTGCG
AAATGGAAGGGGGGAGGAAGGGGGAGGGATACATTTGGATTGTAGATTTT
CGAACTTTGACTGCGCAAGTTTCTGTAGATTCTTCTTTCCCTCCCAATGT
TTTTATTCGTCTCTGTACAGCGGATGAGGTTGTACGATTCACGCAATAGT
ATCCTGAGAATGCTGAGAGTGAAGAGGGAAGGGGAACGAGTGATCGGCCG
CTCAGTGCTTGGTTTAAAATTTTGAAATCCGAATTCGCCTGTTGTAGTCT
CGTACAAAATTATTGCAGCAGGGGTCAATAAAGAATGAACATTACTTTCC
GTTAAAGCAGATGTCTTCTGAGGCCTGGAGGAGGCATTCAGGGCGGTCTT
TTCTCCTTTCACTTGCTTCTCTGAAGTGCTCCGTCCACCTCGGCCACAAA
AAAAAACATCCAGCTCAGCCAGTGGCC
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protein sequence of rna9791

>rna9791-protein ID=rna9791-protein|Name=rna9791|organism=Nannochloropsis gaditana|type=polypeptide|length=81bp
MVNGDYRTCRVRPHPLPTLSEETLLILTLPFYRIFYNRVILFTSLCGSPL
YDLLKKSKIDDCKMLYQRVRSKSPGVANGRS
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mRNA from alignment at KK037256.1:118509..118886+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9791 ID=rna9791|Name=rna9791|organism=Nannochloropsis gaditana|type=mRNA|length=378bp|location=Sequence derived from alignment at KK037256.1:118509..118886+ (Nannochloropsis gaditana)
ATGGTCAATGGGGATTATCGGACGTGCCGAGTGCGgccgcatcctcttcc
cactCTTTCTGAAGAGACCTTGCTTATTGTACATCAGGGCTGCCGCTCGA
CACTTTGAAATTTGTTTTAATATATAGCATATATGCAGAGGGGGAGCATA
CGAACTATATGTCTGTAGGTGTTACATACTTGTCTTTTTCACCGGACGGG
TAAGGGCTAGCTTACCCTACCTTTTTACCGAATCTTTTACAATCGCGTGA
TACTATTTACTTCCCTGTGCGGCTCACCTCTCTACGACCTATTAAAAAAA
TCGAAAATTGACGATTGCAAAATGCTGTACCAGAGGGTACGATCAAAATC
GCCCGGCGTAGCGAACGGAAGATCGTAA
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Coding sequence (CDS) from alignment at KK037256.1:118509..118886+

>rna9791 ID=rna9791|Name=rna9791|organism=Nannochloropsis gaditana|type=CDS|length=492bp|location=Sequence derived from alignment at KK037256.1:118509..118886+ (Nannochloropsis gaditana)
ATGGTCAATGGGGATTATCGGACGTGCCGAGTGCGgccgcatcctcttcc
cactCTTTCTGAAGAGACCTTGCTTATTCTTACCCTACCTTTTTACCGAA
TCTTTTACAATCGCGTGATACTATTTACTTCCCTGTGCGGCTCACCTCTC
TACGACCTATTAAAAAAATCGAAAATTGACGATTGCAAAATGCTGTACCA
GAGGGTACGATCAAAATCGCCCGGCGTAGCGAACGGAAGATCGTAAATGG
TCAATGGGGATTATCGGACGTGCCGAGTGCGgccgcatcctcttcccact
CTTTCTGAAGAGACCTTGCTTATTCTTACCCTACCTTTTTACCGAATCTT
TTACAATCGCGTGATACTATTTACTTCCCTGTGCGGCTCACCTCTCTACG
ACCTATTAAAAAAATCGAAAATTGACGATTGCAAAATGCTGTACCAGAGG
GTACGATCAAAATCGCCCGGCGTAGCGAACGGAAGATCGTAA
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Synonyms
Publications