EWM20926.1, cds9760 (CDS) Nannochloropsis gaditana

Overview
NameEWM20926.1
Unique Namecds9760
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:118509..118586 +
Alignment locationKK037256.1:118719..118886 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20926.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100061g2.8559.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:118509..118586 +
KK037256.1supercontigKK037256.1:118719..118886 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20926.1 vs. NCBI_GenBank
Match: gi|585100882|gb|EWM20926.1| (hypothetical protein Naga_100061g2 [Nannochloropsis gaditana])

HSP 1 Score: 166.392 bits (420), Expect = 2.719e-52
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 
Query:    1 MVNGDYRTCRVRPHPLPTLSEETLLILTLPFYRIFYNRVILFTSLCGSPLYDLLKKSKIDDCKMLYQRVRSKSPGVANGRS 81
            MVNGDYRTCRVRPHPLPTLSEETLLILTLPFYRIFYNRVILFTSLCGSPLYDLLKKSKIDDCKMLYQRVRSKSPGVANGRS
Sbjct:    1 MVNGDYRTCRVRPHPLPTLSEETLLILTLPFYRIFYNRVILFTSLCGSPLYDLLKKSKIDDCKMLYQRVRSKSPGVANGRS 81
The following BLAST results are available for this feature:
BLAST of EWM20926.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100882|gb|EWM20926.1|2.719e-52100.00hypothetical protein Naga_100061g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9791rna9791Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications