lepA, gene9496 (gene) Nannochloropsis gaditana

Overview
NamelepA
Unique Namegene9496
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:91913..94457 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100061g14
Gene biotypeprotein_coding
GenelepA
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:91913..94457 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0008135translation factor activity, RNA binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL094ngnoL094Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G00780NO28G00780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9780rna9780-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9780rna9780Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9780

>rna9780-protein ID=rna9780-protein|Name=rna9780|organism=Nannochloropsis gaditana|type=polypeptide|length=771bp
MHTIDTGFGIHCVHSELADNGGQSRHSQQGAALGGVAVSSLSPLTLRHHC
RANPQPLEPSRSQVIGKTMKNLRRVFFLLLLMLLAAEHAVSFIFPLSTSP
STSRRDAARASWRRCSRAPPHQSALSRLQATTEGAKVAAKVAKDKESGDR
ERKDDKNKPTAMATAAELGKYDVKRVRNFSIIAHIDHGKSTLADRLLEST
KTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDT
PGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIP
VLNKIDLPAADPDRVQEEIEQTVGLDCTEAVRASAKSGIGIDDILEQIVA
RVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMAS
GKEYEVVEVGFMTPEKRAVEVLRAGEVGYLSAAIKAVEDARVGDTITSAR
GGASDALPGYAEANPTVFAGLFPVDADQFEVLRESLGKLKLSDAAISFEP
EKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVLTNR
DEEISIDTPAKLPPATERKAIYEPYVRVEMLAPTDYTGSLMELAQDKRGE
LKEMKYLTPTRTALIYDMPLAEVITDFFDELKSRSKGYASMEYSLVGYRE
NDLVRLDVRINDEEATPLACIVHRDKSYAVGKALTEKLKELIPRQMFKVP
IQACIGGKVVASCALSAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKT
MGKVSVPQEAFQAVLKLKSTN
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Synonyms
Publications