EWM20950.1, cds9723 (CDS) Nannochloropsis gaditana

Overview
NameEWM20950.1
Unique Namecds9723
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:33645..34925 -

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Properties
Property NameValue
Protein idEWM20950.1
ProductHAT dimerization
Orig transcript idgnl|cribi|Naga_100455g3.3250.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:33645..34925 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003676nucleic acid binding
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR008906HATC_dom_C
Homology
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BLAST of EWM20950.1 vs. NCBI_GenBank
Match: gi|585100908|gb|EWM20950.1| (HAT dimerization [Nannochloropsis gaditana])

HSP 1 Score: 884.404 bits (2284), Expect = 0.000e+0
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0 
Query:    1 MGERVHEQRVYLVQFRDAHLSVKQCCLTPQEHQLQVQLLAVLEPFKEAMDVFQTTHSVVISKPYPILLQVYSDLTSDAAILVIPGAKEGIAASELLPLVNEQRMRLATSLQARWLGVNKGEAVEDFTIYGSAAYLDPRNIAVQLLFHLRLEDGTILLHHMHQAVNRLVRGRMEDVIAFLEREAARTPTAPWTTRALIHYRKERAAVAQHHKQEEKHHTQGQEGVDGVSPPTKRLKSWWASLQAELLRECGRAVGVGEGGGVGEGRPKQYITEIVATQLFKEDLVAYGQFWKPECIAVHGLPMEKEECPLVSFWGLMKNRESMPVLCFLAHVILSLQPSSADTEHLFSDSSLTLSERRQSLDAQRLDDLVVVKENWDYFHLKFTKEKEENKRKMRVDHNKNIGKGMKKALAVMNQQKVLLQKKIYDC 426
            MGERVHEQRVYLVQFRDAHLSVKQCCLTPQEHQLQVQLLAVLEPFKEAMDVFQTTHSVVISKPYPILLQVYSDLTSDAAILVIPGAKEGIAASELLPLVNEQRMRLATSLQARWLGVNKGEAVEDFTIYGSAAYLDPRNIAVQLLFHLRLEDGTILLHHMHQAVNRLVRGRMEDVIAFLEREAARTPTAPWTTRALIHYRKERAAVAQHHKQEEKHHTQGQEGVDGVSPPTKRLKSWWASLQAELLRECGRAVGVGEGGGVGEGRPKQYITEIVATQLFKEDLVAYGQFWKPECIAVHGLPMEKEECPLVSFWGLMKNRESMPVLCFLAHVILSLQPSSADTEHLFSDSSLTLSERRQSLDAQRLDDLVVVKENWDYFHLKFTKEKEENKRKMRVDHNKNIGKGMKKALAVMNQQKVLLQKKIYDC
Sbjct:    1 MGERVHEQRVYLVQFRDAHLSVKQCCLTPQEHQLQVQLLAVLEPFKEAMDVFQTTHSVVISKPYPILLQVYSDLTSDAAILVIPGAKEGIAASELLPLVNEQRMRLATSLQARWLGVNKGEAVEDFTIYGSAAYLDPRNIAVQLLFHLRLEDGTILLHHMHQAVNRLVRGRMEDVIAFLEREAARTPTAPWTTRALIHYRKERAAVAQHHKQEEKHHTQGQEGVDGVSPPTKRLKSWWASLQAELLRECGRAVGVGEGGGVGEGRPKQYITEIVATQLFKEDLVAYGQFWKPECIAVHGLPMEKEECPLVSFWGLMKNRESMPVLCFLAHVILSLQPSSADTEHLFSDSSLTLSERRQSLDAQRLDDLVVVKENWDYFHLKFTKEKEENKRKMRVDHNKNIGKGMKKALAVMNQQKVLLQKKIYDC 426
The following BLAST results are available for this feature:
BLAST of EWM20950.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Position :
0
Zoom :
x 1
01SequenceEWM20950.1
Match NameE-valueIdentityDescription
gi|585100908|gb|EWM20950.1|0.000e+0100.00HAT dimerization [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9754rna9754Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications