rna9745, rna9745 (mRNA) Nannochloropsis gaditana

Overview
Namerna9745
Unique Namerna9745
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1206
Alignment locationKK037256.1:9851..10475 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101659g2.4452.mrna
Orig protein idgnl|cribi|Naga_101659g2.4452
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:9851..10475 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101659g2gene9465Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9745rna9745-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20958.1cds9714Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9745 ID=rna9745|Name=rna9745|organism=Nannochloropsis gaditana|type=mRNA|length=1206bp
TATCGTTTTCGGATTCTGCCACCATCCGATATTCCTACCGCGCTATCTTG
TCATGAAGCTTCCTGTTGTTCATCCTGCGTTCAGCAATGATGATAAAAGA
AAATTTAACGAGCCTTGTCGCCCTTATCCTTTCCCCTTCCATGATACTAA
TCGCTCCCGTGACTGTGGTCACGTTGGGGCGTGACTTCACTGAGGGGAGC
AAGGAGCAAACCCAGCATGTGACAAGTGCACCACGGTTATTTTGCCCCCC
AAAATACAAACATCCAACTGCTTGGCAACTTAAGACGAAATTGTGAAGTC
TCTGGCTTTGAAGTGTACAGAAGGAATTCCATTTCGGGCATGACCCATTC
ATTCGTCGGATACTACGAGCAGCACCGGCCATCCGCCAACCCTCAGGCCG
GTTCAAAAGTGTATAATACGGACTCCTCGATCCAAGAGCGTCGCCACAAA
CTAGAGTCCCAGAAGAATTGTCAACGACGTTATCGTGAGTCAGTATCTAG
ACATGGCCTGCCGGCGCCCAGGACGTGGCCAAGGCCCCATGCCACCACCA
AGCCTCCCTACGCCACTACACCAAATGGTAATGACATCAAAAATAAATAT
CCTCGATCTCTCAATGCATCTTGGAAACATTCGAATATACCGGTGCGTAA
TATTAATGGTCACGTGGATGGTGTAAACATAAAATAAGATGCGTGCTGAA
GACCTCTGTAGCCGCGGCCGCTAGTCTGGGAAAAAGTCAGGCCCCTTTTT
AACTCCGTCAAGCCAACGAAATGGTCCAGATTTTTACGACTCATCGAAGC
AATTCCAAGCATTATCTTGGCTCGAGGATCGATAATATAAGCCAGGTAGT
GGAATGTGTTAATTCGTTCTTCGACAGAAAGTCATCCTCACGCTTTCTTT
TTCGCATTTGTACATTTTTTGATGAAATGTCGTGATACATCAAACGCTTC
TTCGTCTCAGTGACAAAAGAAGAGAAAGAACTGTAACCGAGATTTTCGGT
AAGCAATTGGAAGACTGGCTGGCGGCGTCAATGCGGAAGAGACGAGAAGA
GCAAGTACATCGAACCAACTTGAGAGTCCCAACTACAACGGAAGAAGTCA
CCAGGGTCAAAATAGTTTGAGAGCCCTTCTTTTGGCATTTTCGTTGTGTC
AAGTGCCCACCTCTCCCTTACAACCCCGGCCACTGTACATGTCTTTGGAT
GTGTCT
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protein sequence of rna9745

>rna9745-protein ID=rna9745-protein|Name=rna9745|organism=Nannochloropsis gaditana|type=polypeptide|length=125bp
SAYLFCTTFLSLLWGQGAAQGVHAHAHPYTPPGKGRGLRGAFLSTHETGT
GTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAA
EIKLAAAEIKRVLQSGQKSGPFDTP
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mRNA from alignment at KK037256.1:9851..10475+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9745 ID=rna9745|Name=rna9745|organism=Nannochloropsis gaditana|type=mRNA|length=625bp|location=Sequence derived from alignment at KK037256.1:9851..10475+ (Nannochloropsis gaditana)
TCTGCCTATCTATTTTGTACGACTTTTTTATCTTTACTGTGGGGACAAGG
GGCCGCACAAGGTGTTCATGCTCATGCACATCCATACACGCCACCAGGGA
AGGGACGCGGGCTGCGGGGAGCGTTCCTCTCGACACATGAGACGGGAACG
GGCACGGGCAGTGGAAAGTGGACCGCGATGGTGATCTCGGTAGGCCTCCA
GATCGTTGTTGGGGTGCTGGGGGTCGCTAGCTTTACCGCCGTGGCCGTCC
ATCACCTCGACCAGAGGGAGATCATGcgtgtggagggcgagcgagCGGCA
GAGATCAAACTAGCTGCGGCGGAGATCAAGCGTGTGCTGCAGTCTGGACA
GAAGTCAGGCCCCTTTGACACTCCGTGAAGCCAATGAAATGGTCCAGATA
TTTGCGTCTCATCAAAGCAGCTCCAAGTCTTGTCTTGGCTCGAGGATCGA
TAATACAAACCAGGTTGTGGAACGTGTTATTCGTACTTCGACAGTAAGTC
ATGCTCGCGCTTGCATATTGGCATTTTAACGAATTTTTGATGAACTGTCG
TGACGCATCAACTGCTTCTCCGTCTAAATgacaaaagaagaggaagaatt
gTAACCGAGATTATTTTTTGTAATT
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Coding sequence (CDS) from alignment at KK037256.1:9851..10475+

>rna9745 ID=rna9745|Name=rna9745|organism=Nannochloropsis gaditana|type=CDS|length=378bp|location=Sequence derived from alignment at KK037256.1:9851..10475+ (Nannochloropsis gaditana)
TCTGCCTATCTATTTTGTACGACTTTTTTATCTTTACTGTGGGGACAAGG
GGCCGCACAAGGTGTTCATGCTCATGCACATCCATACACGCCACCAGGGA
AGGGACGCGGGCTGCGGGGAGCGTTCCTCTCGACACATGAGACGGGAACG
GGCACGGGCAGTGGAAAGTGGACCGCGATGGTGATCTCGGTAGGCCTCCA
GATCGTTGTTGGGGTGCTGGGGGTCGCTAGCTTTACCGCCGTGGCCGTCC
ATCACCTCGACCAGAGGGAGATCATGcgtgtggagggcgagcgagCGGCA
GAGATCAAACTAGCTGCGGCGGAGATCAAGCGTGTGCTGCAGTCTGGACA
GAAGTCAGGCCCCTTTGACACTCCGTGA
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Synonyms
Publications