EWM20987.1, cds9686 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|585100983|gb|EWM20987.1| (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 727.628 bits (1877), Expect = 0.000e+0 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0
Query: 1 MATDGPSFLEGSEAEEGKKGQYQAMDGLNRPLTPTESAACALQKEKSDGSLALSSASSASAIPPSLPYLVSAASSSLLSPARSRIWLLCPVLSLLAVVSLLLVTGGTLLALFHSRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGGGEGEEEGAEEGGERLGLLAEKGGGRGKGGGRGVYGVGGGG 376
MATDGPSFLEGSEAEEGKKGQYQAMDGLNRPLTPTESAACALQKEKSDGSLALSSASSASAIPPSLPYLVSAASSSLLSPARSRIWLLCPVLSLLAVVSLLLVTGGTLLALFHSRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGGGEGEEEGAEEGGERLGLLAEKGGGRGKGGGRGVYGVGGGG
Sbjct: 1 MATDGPSFLEGSEAEEGKKGQYQAMDGLNRPLTPTESAACALQKEKSDGSLALSSASSASAIPPSLPYLVSAASSSLLSPARSRIWLLCPVLSLLAVVSLLLVTGGTLLALFHSRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGGGEGEEEGAEEGGERLGLLAEKGGGRGKGGGRGVYGVGGGG 376
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|585108346|gb|EWM26339.1| (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 208.764 bits (530), Expect = 9.498e-59 Identity = 134/326 (41.10%), Postives = 183/326 (56.13%), Query Frame = 0
Query: 91 VLSLLAVVSLLLVTGGTLLALFHSRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGL-----------------------------LLPPVRPPA---PSAPPSAPARA-RALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGG----EVGAVGGGLAVTLALVLLLRRYSVKYMARL-AEEG-------EEEGGGEGEEEG---AEEGGERLGLLAEKGGGRGKGGGRG 368
+L +L+VV + V G L + ++ + W++A AP SA+YYA T LW++LCLPST+IEL GG IF PV LLT+ V K GC LAFLL + A+ +LR L L R PA PS P S R RA+F+AME HPWK+T LLRF+ +PI++KNYGMA LPCP VF LCT AS+P+TL+W + G S+++L + L GGG + G E+G + GLA+ + L+ +LRRY+ +Y A + AEE E G G+GEE+ A+EGG + ++ G K G G
Sbjct: 170 MLLVLSVVLICAVAGSYLCVRYRDQVLEGSEWIRAHAPQSAVYYALITALWIILCLPSTIIELLGGAIFSYPVALLTLTVGKQLGCMLAFLLAKVFASPTLRDALGHSSHSPTRGKEPNESVVENNDQEGGDAPSLRHSRFPAAARPSKPMSKRKRTIRAMFIAMECHPWKITFLLRFLPIPISIKNYGMAFLPCPTHVFFLCTFVASIPFTLIWVNLGESTKNLLEALNGGGAAMKRHGIFAQELGLLVVGLALLMVLIFILRRYTQRYAAVIEAEEADGVGTGAERAGDGKGEEDSLTRADEGGSKRAEDDDRRGVDPKKRGHG 495
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|585110831|gb|EWM28436.1| (hypothetical protein Naga_100924g3 [Nannochloropsis gaditana]) HSP 1 Score: 99.3673 bits (246), Expect = 3.296e-19 Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = 0
Query: 217 ALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLG--GGGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGGGEGEEEGAEE 346
AL A+++HPW++ LLR + +PI KNYGMA LP P +++LC L A +P+T+LW H G S RSL + + G G RR E+ + + + +AL +L+RRY+ +Y L EE E+ EEE EE
Sbjct: 321 ALLWAVKKHPWQICFLLRLLPVPIGAKNYGMACLPFPVLIYSLCVLVAEMPFTILWIHIGRSCRSLLEAMNGHGSGKRRSYWHEILLLVLSIVLLVALGVLMRRYTARYAKYLEEEREKNEEVAMEEEAKEE 452 HSP 2 Score: 62.003 bits (149), Expect = 7.633e-7 Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 0
Query: 105 GGTLLALFHSRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARAL 218
G LA + L ++Q RAPLSA+Y A LW++LCLP+TL+E+ G I+ PV +++ V K GC L F +G+C+ S + L + A ARARAL
Sbjct: 118 GSFALAQYKDELLQGAQYIQDRAPLSAVYMALLLALWIILCLPATLLEVVAGMIYTWPVAFVSLTVGKQLGCNLGFSIGQCITTGSFQDNFLSKLTK-----GEQDAVARARAL 226
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|1173959489|gb|OQS05717.1| (ATP-binding Cassette (ABC) superfamily [Thraustotheca clavata]) HSP 1 Score: 93.5893 bits (231), Expect = 2.140e-18 Identity = 65/228 (28.51%), Postives = 107/228 (46.93%), Query Frame = 0
Query: 114 SRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGG-GRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGGGEGE 340
S +D+ W+Q Y + ++ CLP+T+ E+ G+IFG+ V K G C++F+ GR + + L S PP RA + L WK+ L R ++PIA+KNYG++ LP F +F TL P+ + + G ++ + ++ G + + + AVGGG A+T L L+ Y+ KY+ +LAE+ E + E
Sbjct: 29 SYFSDVFQWLQTHPTSGGFIYMVIYAITIVFCLPATVFEMIAGYIFGMWWGWAIAIVGKTTGSCISFVFGRYFFHARVLRLL---------ESGPP--IFRALGILLNRPDLKWKIVCLTRIAWMPIAIKNYGLSVLPVSFRMFFWSTLLLGTPFGGVSCYIGHTATHVNSIVSGSHESKSHLQFVLMAVGGGSALT--LFCLVGYYTRKYIEQLAEKDLEMTTTKHE 243
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|953502243|emb|CEG36628.1| (atp-binding cassette superfamily [Plasmopara halstedii]) HSP 1 Score: 91.6633 bits (226), Expect = 1.724e-17 Identity = 71/236 (30.08%), Postives = 116/236 (49.15%), Query Frame = 0
Query: 103 VTGGTLLALF--HSRLTDLMAWVQARAPL-SALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGG-GGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEE 334
VT G ++ F + T ++ W+Q L +ALY +FT +V+LC PST+ EL G+IFGL + LL K G L++++GR + + + PA S + + L + L R + PIA+KNYG++ L F V+ L LP++ +W ++G + ++ +L R G + VG G A L L+ ++ YS KY+ LA+E ++E
Sbjct: 47 VTAGLIVIRFVRSNDFTLVVQWLQVHEALGAALYVCSFTC-FVVLCFPSTVFELLAGYIFGLWLGLLLATTGKLLGSVLSYVIGRYMCRHRVHSYM---ARGHPALQGFQSLLRKRQIL----------IVFLTRVAFFPIAIKNYGLSVLDVRFSVYFAAALLTGLPFSFIWVYSGHAVENVAALLVSPTASRHSTEGILLLVGAGSA--LLLLFMVGYYSRKYVLELAKEEQDE 266
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|1173947608|gb|OQR95846.1| (ATP-binding Cassette (ABC) superfamily [Achlya hypogyna]) HSP 1 Score: 90.8929 bits (224), Expect = 2.443e-17 Identity = 70/221 (31.67%), Postives = 106/221 (47.96%), Query Frame = 0
Query: 114 SRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEE 334
S + D + W++A + + Y ++LCLP+TL EL G++FG VAK G CLAF LGR L +L + AP RA L LA WK+ L R ++PIA+KNYG++ LP PF +F TL P+ + + G S+ + +L G + + G + G A LAL+ L+ + KY+ LA+ ++
Sbjct: 27 SFVADSVEWLRAHQLMGGVLYTVGFTASIVLCLPATLFELIAGYVFGFWGGWAISIVAKTAGSCLAFCLGR-----YLLHARVLRLLDSGAP------LFRALGLLLARSDMKWKIVCLARAAWMPIAIKNYGLSVLPVPFSLFFWSTLLLGTPFGGISCYLGHSATQVSSLLSGHHDSGYL--KFGLLAVGAASGLALLCLVGYQTRKYIEELADAERDD 234
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|669171049|ref|XP_008620873.1| (hypothetical protein SDRG_16441 [Saprolegnia diclina VS20] >gi|530727461|gb|EQC25703.1| hypothetical protein SDRG_16441 [Saprolegnia diclina VS20]) HSP 1 Score: 89.3521 bits (220), Expect = 1.013e-16 Identity = 74/232 (31.90%), Postives = 108/232 (46.55%), Query Frame = 0
Query: 120 MAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGG---GGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLA---EEGE-EEGGGEGEEEGA 344
+ W++A L Y V+LCLP+TL EL G+IFG + V K G CL+F +GR +L + AP RA L L+ WK+ L R ++PIA+KNYG++ LP PFP+F TL P+ + + G S+ + +L G G + + VGA G L L+ L+ + KY+ LA +G+ E GG+ E A
Sbjct: 34 VHWLRAHPATGGLLYILLYTCCVVLCLPATLFELVAGYIFGFWGGWVISIVGKTTGSCLSFYIGR-----YFLHARVLRILESGAPMF------RALGLLLSRPDMKWKIVCLARVAWMPIAIKNYGLSVLPVPFPMFFWSTLILGTPFGGISCYLGHSATEVSSLLSGKHESGYFKVILMAVGATSG-----LTLLCLVGYQTRKYIEELAAAERDGDLELMGGQHTHEYA 249
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|673030216|ref|XP_008869069.1| (hypothetical protein H310_05973 [Aphanomyces invadans] >gi|574475464|gb|ETW02464.1| hypothetical protein H310_05973 [Aphanomyces invadans]) HSP 1 Score: 88.5817 bits (218), Expect = 2.116e-16 Identity = 73/232 (31.47%), Postives = 109/232 (46.98%), Query Frame = 0
Query: 118 DLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPV-TLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGR--RQVGGEVGAVGGGLAVTLALVLLLRRYSVK-YMARLAEEGEE---EGGGEGEEE 342
+L+ W Q L L Y F V+LC PST+ +L G+IFG T + +G K G +AFLLGR V D++R+ L PP RA L +ER+ + LLL+F Y+PI +KNYG+A PF +F + T L + G S+ + ++L R +V EV + V+ L+ ++ Y K Y+ LA+ + G +G E
Sbjct: 65 ELVRWEQDHQVLGGLIYVLFYAACVVLCCPSTIFDLLAGYIFGFGFGTAVAMG-GKTLGSVVAFLLGRYVMHDTIRRKL---------TEGPPV----LRAWALLLERNELQFVLLLQFAYIPIFLKNYGLAVAGVPFGLFLWTNVVIGGARTWLAVYIGHSTAHITEILTSHAARGDARVAQEVLMIVA--VVSTLLLFVVGSYRTKQYLDELADREVNALVDNGDKGHFE 280
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|813170565|ref|XP_012204038.1| (hypothetical protein SPRG_09446 [Saprolegnia parasitica CBS 223.65] >gi|641531083|gb|KDO25172.1| hypothetical protein SPRG_09446 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 86.6557 bits (213), Expect = 7.681e-16 Identity = 69/230 (30.00%), Postives = 104/230 (45.22%), Query Frame = 0
Query: 120 MAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGGEVGAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGGGEGEEEGAEEGGE 349
+ W++A L Y V+LCLP+TL EL G++FG V K G CL+F +GR +L + AP RA L L+ WK+ L R ++PIA+KNYG++ LP PFP+F TL P+ + + G S+ + +L G + A+G +T L+ L+ + KY+ LA E G+ E G ++ E
Sbjct: 35 VHWLRAHPATGGLLYTLLYTCCVVLCLPATLFELVAGYVFGFWGGWAISIVGKTAGSCLSFYIGR-----YFLHARVLRVLESGAPMF------RALGLLLSRPDMKWKIVCLARVAWMPIAIKNYGLSVLPVPFPMFFWSTLILGTPFGGISCYLGHSATEVSSLLSGKHESSCFKFVLMAIGATSGLT--LLCLVGYQTRKYIEELA---AAERDGDLELRGGQQSHE 248
BLAST of EWM20987.1 vs. NCBI_GenBank
Match: gi|695412349|ref|XP_009525716.1| (hypothetical protein PHYSODRAFT_360349 [Phytophthora sojae] >gi|348676841|gb|EGZ16658.1| hypothetical protein PHYSODRAFT_360349 [Phytophthora sojae]) HSP 1 Score: 86.2705 bits (212), Expect = 1.664e-15 Identity = 80/244 (32.79%), Postives = 115/244 (47.13%), Query Frame = 0
Query: 97 VVSLLLVTGGTLLALFHSRLTDLMA-WVQARAPL-SALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVR-PPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGGEV-GAVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGG 336
V +L L G L S DL+ W+Q L +ALY +FT +V+LC PST EL G+IFG + LL K G L++ +GR + R+ + R PA S + + L V L R + PIAVKNYG++ L FPVF L LP++++W ++G + + +L R V VG G A+ L V+ + Y+ KY+ LAEE + EG
Sbjct: 40 VAALGLTAGMLLFRFVRSDDFDLVVRWLQTHEALGAALYVGSFTG-FVVLCFPSTAFELLAGYIFGFWLGLLLATAGKLVGSVLSYAIGRYLC----RRRVHAYMARGHPALQGFQSLLRKRQVL----------VVFLTRVAFFPIAVKNYGLSVLDVQFPVFFAAALLTGLPFSVIWVYSGHAVENFTALLASPTASRHSTEMVLLLVGAGSALLLLAVVGI--YTRKYVLGLAEEEKREGA 266 The following BLAST results are available for this feature:
BLAST of EWM20987.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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