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Properties
| Property Name | Value |
|---|
| Product | SNARE associated Golgi protein |
| Orig transcript id | gnl|cribi|Naga_100211g9.3041.mrna |
| Orig protein id | gnl|cribi|Naga_100211g9.3041 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:239613..241271 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9717 ID=rna9717|Name=rna9717|organism=Nannochloropsis gaditana|type=mRNA|length=246bp
ATGCTGAGGAAAGCCTACCGAGCTGTGGTCCTCGACCTCTTAGTCGCCGT
GCAAGCCTCAGGGCTGCTCGCCCCACGCTGTCACGTCTTTTTGTCCTACC
TCAAGCCAGTGGACGGGGTCGACAACGTGTACGAGGCCATTCCGGCGGAT
GCCAGCGTCGCCCCCACCCTGGTGACAGCGCGATTGTCACCCCATCTACC
TGCATGCTGTTTGGTGAGGAGCACTTGCAGCAGACGGAAGGACTGA back to topprotein sequence of rna9717 >rna9717-protein ID=rna9717-protein|Name=rna9717|organism=Nannochloropsis gaditana|type=polypeptide|length=376bp
MATDGPSFLEGSEAEEGKKGQYQAMDGLNRPLTPTESAACALQKEKSDGS
LALSSASSASAIPPSLPYLVSAASSSLLSPARSRIWLLCPVLSLLAVVSL
LLVTGGTLLALFHSRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTL
IELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPV
RPPAPSAPPSAPARARALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAAL
PCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQVGGEVG
AVGGGLAVTLALVLLLRRYSVKYMARLAEEGEEEGGGEGEEEGAEEGGER
LGLLAEKGGGRGKGGGRGVYGVGGGG back to topmRNA from alignment at KK037255.1:239613..241271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9717 ID=rna9717|Name=rna9717|organism=Nannochloropsis gaditana|type=mRNA|length=1659bp|location=Sequence derived from alignment at KK037255.1:239613..241271+ (Nannochloropsis gaditana)
TGCCAGGAGAGTAGCGCCGTTCTTTCTCGCACATGCATGTCTCAGCATCA
GGATCTGAATCATGCCTTTGCAGTGGAGCAAGTAAAAGAAATCTAACTCA
CGCGTGTTTGGTCACGTGGCATAACCTCCTTACCCCCTTACCCCCCCAAC
CTGCCATCACAACACTCATTCTGCAGGACTCTGAAAAAGGATCGGCGGCG
CCTGACCCTCGCGAGCCCTGTGTTTGGTTCCTCAAACGTTAGCCGGTGCT
CAGCCTGCGGCTGCCGTCGTCGACCGGCAGGCCTTGTCACGGCCTTTAAA
TTTCCGATGGCCACAGACGGGCCAAGTTTCCTGGAAGGTTcggaggctga
ggaaggaaagaaggggcagtACCAGGCCATGGACGGTCTCAATAGGCCCT
TAACACCCACAGAATCGGCTGCTTGCGCCTTGCAGAAAGAGAAAAGCGAC
GGGAGCCTCGCTCTCTCGTCCGCCTCAAGCGCATcggccatccccccctc
tctcccctacctcgtctccgccgcctcctcctccctcctctcccccgccc
gcagcCGAATTTGGCTCCTGTGCccggtcctctccctgcttgctGTGgtc
agcctcctccttgtcacgGGCGGCACGCtgctcgcccttttccactCGAG
GCTCACGGACCTCATGGCCTGGGTGCAGGCACGcgctcccctctctgccc
tttACTACGCCGCCTTCACGGTCCTCTGGGTgctcctctgccttccttcc
acaCTCATCGAGCTCTGCGGGGGCTTTATCTTCGGTACGCGCTCTCTGTG
CTTTTCCTCtattcctcttccctcctttcccccctcctattccctcctcc
tctttccctccttgtccttcctttatccgcctcgcttcttcctctcgccc
ccctcctcccccccgtgcGACCGTCTCCTGGCCCTCGGGTCTGTGCGCAA
GAGGAGCCCCTGAGAGCACCCACGTCCTCCGTGCCCggtgccgcctcccc
ccacagGCCTCCCTGTCACCCTCCTGACCGTCGGCGTCGCCAAGCCCTTC
GGCTgctgcctcgccttccttctcggccgCTGCGTGGCCGCCGACTccct
ccgccagggcctcctcctcccgcccgtccgtccgcccgccccctccgccc
cgccctccgcccccgcccgggcccgcgCCCTCTTTCTGGCCATGGAGCGG
CACCCCTGGAAGGTgacactcctcctccgcttcatGTACCTGCCCATCGC
CGTCAAGAACTACGGGatggccgccctcccctgccccttccctgtcttCG
CCCTCTGCAcgctcgccgcctccctcccctacacCCTGCTCTGGGCCCAC
GCGGGGGCCtcgtcccgctccctctACGACgtcctgggggggggcggggg
gcggaggcaggtggggggggaggtcggggcggtggggggggggctggcgg
tGACCCTGGCCCTGGTGCTGCTCTTGCGGCGGTATTCGGTCAAGTACATG
GCacggctggcggaggagggcgaggaggagggcgggggggagggcgagga
ggagggcgcggaggagggcggggagaggctGGGACTCCtggcggagaaag
gaggaggaagggggaaaggaggaggaaggggggtgtACGGGGTtggtggg
ggggggtag back to topCoding sequence (CDS) from alignment at KK037255.1:239613..241271+ >rna9717 ID=rna9717|Name=rna9717|organism=Nannochloropsis gaditana|type=CDS|length=2262bp|location=Sequence derived from alignment at KK037255.1:239613..241271+ (Nannochloropsis gaditana)
ATGGCCACAGACGGGCCAAGTTTCCTGGAAGGTTcggaggctgaggaagg
aaagaaggggcagtACCAGGCCATGGACGGTCTCAATAGGCCCTTAACAC
CCACAGAATCGGCTGCTTGCGCCTTGCAGAAAGAGAAAAGCGACGGGAGC
CTCGCTCTCTCGTCCGCCTCAAGCGCATcggccatccccccctctctccc
ctacctcgtctccgccgcctcctcctccctcctctcccccgcccgcagcC
GAATTTGGCTCCTGTGCccggtcctctccctgcttgctGTGgtcagcctc
ctccttgtcacgGGCGGCACGCtgctcgcccttttccactCGAGGCTCAC
GGACCTCATGGCCTGGGTGCAGGCACGcgctcccctctctgccctttACT
ACGCCGCCTTCACGGTCCTCTGGGTgctcctctgccttccttccacaCTC
ATCGAGCTCTGCGGGGGCTTTATCTTCGGCCTCCCTGTCACCCTCCTGAC
CGTCGGCGTCGCCAAGCCCTTCGGCTgctgcctcgccttccttctcggcc
gCTGCGTGGCCGCCGACTccctccgccagggcctcctcctcccgcccgtc
cgtccgcccgccccctccgccccgccctccgcccccgcccgggcccgcgC
CCTCTTTCTGGCCATGGAGCGGCACCCCTGGAAGGTgacactcctcctcc
gcttcatGTACCTGCCCATCGCCGTCAAGAACTACGGGatggccgccctc
ccctgccccttccctgtcttCGCCCTCTGCAcgctcgccgcctccctccc
ctacacCCTGCTCTGGGCCCACGCGGGGGCCtcgtcccgctccctctACG
ACgtcctgggggggggcggggggcggaggcaggtggggggggaggtcggg
gcggtggggggggggctggcggtGACCCTGGCCCTGGTGCTGCTCTTGCG
GCGGTATTCGGTCAAGTACATGGCacggctggcggaggagggcgaggagg
agggcgggggggagggcgaggaggagggcgcggaggagggcggggagagg
ctGGGACTCCtggcggagaaaggaggaggaagggggaaaggaggaggaag
gggggtgtACGGGGTtggtgggggggggtagATGGCCACAGACGGGCCAA
GTTTCCTGGAAGGTTcggaggctgaggaaggaaagaaggggcagtACCAG
GCCATGGACGGTCTCAATAGGCCCTTAACACCCACAGAATCGGCTGCTTG
CGCCTTGCAGAAAGAGAAAAGCGACGGGAGCCTCGCTCTCTCGTCCGCCT
CAAGCGCATcggccatccccccctctctcccctacctcgtctccgccgcc
tcctcctccctcctctcccccgcccgcagcCGAATTTGGCTCCTGTGCcc
ggtcctctccctgcttgctGTGgtcagcctcctccttgtcacgGGCGGCA
CGCtgctcgcccttttccactCGAGGCTCACGGACCTCATGGCCTGGGTG
CAGGCACGcgctcccctctctgccctttACTACGCCGCCTTCACGGTCCT
CTGGGTgctcctctgccttccttccacaCTCATCGAGCTCTGCGGGGGCT
TTATCTTCGGCCTCCCTGTCACCCTCCTGACCGTCGGCGTCGCCAAGCCC
TTCGGCTgctgcctcgccttccttctcggccgCTGCGTGGCCGCCGACTc
cctccgccagggcctcctcctcccgcccgtccgtccgcccgccccctccg
ccccgccctccgcccccgcccgggcccgcgCCCTCTTTCTGGCCATGGAG
CGGCACCCCTGGAAGGTgacactcctcctccgcttcatGTACCTGCCCAT
CGCCGTCAAGAACTACGGGatggccgccctcccctgccccttccctgtct
tCGCCCTCTGCAcgctcgccgcctccctcccctacacCCTGCTCTGGGCC
CACGCGGGGGCCtcgtcccgctccctctACGACgtcctgggggggggcgg
ggggcggaggcaggtggggggggaggtcggggcggtggggggggggctgg
cggtGACCCTGGCCCTGGTGCTGCTCTTGCGGCGGTATTCGGTCAAGTAC
ATGGCacggctggcggaggagggcgaggaggagggcgggggggagggcga
ggaggagggcgcggaggagggcggggagaggctGGGACTCCtggcggaga
aaggaggaggaagggggaaaggaggaggaaggggggtgtACGGGGTtggt
gggggggggtag back to top
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