EWM21033.1, cds9641 (CDS) Nannochloropsis gaditana

Overview
NameEWM21033.1
Unique Namecds9641
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:113118..113338 -
Alignment locationKK037255.1:112620..112763 -
Alignment locationKK037255.1:112458..112566 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21033.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101771g2.5765.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:113118..113338 -
KK037255.1supercontigKK037255.1:112620..112763 -
KK037255.1supercontigKK037255.1:112458..112566 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21033.1 vs. NCBI_GenBank
Match: gi|585101039|gb|EWM21033.1| (hypothetical protein Naga_101771g2 [Nannochloropsis gaditana])

HSP 1 Score: 319.316 bits (817), Expect = 2.343e-110
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 
Query:    1 MKQQAAELLPGHARRTLMGQGGREGGREGGREAGLAFMHRNARAEYQRGVIVGMGRRTVPMPVGGAEVVARQEDLRPLLDFVLIQNVEPPSMHSNIGKGSNMTKRDVLGQRNARDGGASQCIKSGRVGPKCNQPWYPQPVRQEIWREKNETIVTLLG 157
            MKQQAAELLPGHARRTLMGQGGREGGREGGREAGLAFMHRNARAEYQRGVIVGMGRRTVPMPVGGAEVVARQEDLRPLLDFVLIQNVEPPSMHSNIGKGSNMTKRDVLGQRNARDGGASQCIKSGRVGPKCNQPWYPQPVRQEIWREKNETIVTLLG
Sbjct:    1 MKQQAAELLPGHARRTLMGQGGREGGREGGREAGLAFMHRNARAEYQRGVIVGMGRRTVPMPVGGAEVVARQEDLRPLLDFVLIQNVEPPSMHSNIGKGSNMTKRDVLGQRNARDGGASQCIKSGRVGPKCNQPWYPQPVRQEIWREKNETIVTLLG 157
The following BLAST results are available for this feature:
BLAST of EWM21033.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101039|gb|EWM21033.1|2.343e-110100.00hypothetical protein Naga_101771g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9672rna9672Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications