rna9672, rna9672 (mRNA) Nannochloropsis gaditana

Overview
Namerna9672
Unique Namerna9672
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length691
Alignment locationKK037255.1:112458..113338 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101771g2.5765.mrna
Orig protein idgnl|cribi|Naga_101771g2.5765
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:112458..113338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101771g2gene9392Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9672rna9672-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21033.1cds9641Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9672 ID=rna9672|Name=rna9672|organism=Nannochloropsis gaditana|type=mRNA|length=691bp
CCTCTTCCTGCCCTCCTTCCGACCCGCGCGTCAGGGACTGGACTTACAGC
GCCATGTTTTCCCGCCCTCGCCTCCAGTTCCATCGAGACCTTACGCCACC
CTGCCATACCCCCCCCCGCCTTGCTCCTCCCTCTTCGCTTCCGCCCCCTC
CCCCTCCACCACCCTTCCCTCCTTCTCGATCGGCTTGGACCTCTCGGGAG
GGGCCAGGGGGTGGAGGGAAGGAGGATGGGGGAACGGGGGGGCAGACAGG
AGAGGGAGGGTGTCTCCGCGGGCCCTGGCGCCCTTCCTCGGGGAGGAGGG
GGGCCTAGTCGCGGAAGAGGTGACAGGGGGCGAGGAGAGAGGGGAGTGGG
AGTTAGAGGAGGAAGGGGAAAAGCAGGATGGAAAGGATGGTTTATGCGCC
AAGTCGAGGGGGTGAAAGAGGGGAAGGAGGGCTTGGGGAGGCGGGGCGGG
CGGCGGAAGGGAGAGCGCAGAGATGCCGACCCCCCGTACTTCACTCTCTG
TGGAGACTGGCAAGTGTTACCGACGATTTCCTTGCAAACTGGCAGTCTCT
ATGTAGAATGCCAATCTCTGTGTAGAATGACCATCTGTGTGTAGAATGGC
AAGGGGGCATAGCACGATGTACTGAATAAAAGGAAAGCAGCGACACAGCA
TCAATAAGTCAAGAAGAAAAGCAAAATCCGGGTACCATTCT
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protein sequence of rna9672

>rna9672-protein ID=rna9672-protein|Name=rna9672|organism=Nannochloropsis gaditana|type=polypeptide|length=157bp
MKQQAAELLPGHARRTLMGQGGREGGREGGREAGLAFMHRNARAEYQRGV
IVGMGRRTVPMPVGGAEVVARQEDLRPLLDFVLIQNVEPPSMHSNIGKGS
NMTKRDVLGQRNARDGGASQCIKSGRVGPKCNQPWYPQPVRQEIWREKNE
TIVTLLG
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mRNA from alignment at KK037255.1:112458..113338-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9672 ID=rna9672|Name=rna9672|organism=Nannochloropsis gaditana|type=mRNA|length=881bp|location=Sequence derived from alignment at KK037255.1:112458..113338- (Nannochloropsis gaditana)
ATGAAGCAACAGGCCGCCGAGCTCCTCCCCGGGCACGCGCGGAGGACGTT
GATGGGCCAGGGCGGGAGGGAGGGCGGGCGGGAGGGCGGGAGGGAGGCAG
GGCTGGCTTTCATGCACCGGAACGCGCGGGCAGAGTACCAGCGAGGGGTG
ATAGTGGGTATGGGAAGGCGGACGGTGCCCATGCCGGTAGGAGGGGCGGA
GGTGGTGGCACGCCAAGAAGAGTTCAAGGCGAGTCGCAACCCGGCGGTCC
TCTCTGCGAAGGACGCGGGCTGGCTGCAGGAGATGGAGGAGGAAGGCCGA
CGGCGGCGTGGGGAGAGGAGGGGGGAGAAGGACTTGGACTGGGACGACAT
GGATGACTACGACGGCGTGGTCGAGGAGGAGGAGGAGGAGGAGGAGGGGG
ACCCGGGGCCTTTCTAGGGAGAGGAGGGGGGAAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGGACTCTGTCGTCACGT
GCGAGGCGTCGCGTGTCCTTCCGTTCCTGTCCTTGTTGTTCCATGGTGCC
ATGCCTTTTTCCATCCACCATGAAGCTTGCGGCCTCTCCTTGACTTCGTT
CTAATTCAAAATGTTGAACCACCGTCCATGCATTCAAATATTGGAAAAGG
GAGCAATATGACAAAAAGAGACGTTTTGGGGCAGAGGAATGCCAGGGATG
GGGGGGCGTCACAGTGCATGTAAGGCGAGGCTGACTCCTTTCACGAAAAA
GTGGATGACCTCGAGGCGGTAGAAAGTCCGGTCGCGTGGGGCCGAAATGC
AACCAACCCTGGTACCCTCAGCCAGTGCGACAAGAAATATGGCGCGAAAA
AAATGAAACCATTGTGACCTTACTGGGATAG
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Coding sequence (CDS) from alignment at KK037255.1:112458..113338-

>rna9672 ID=rna9672|Name=rna9672|organism=Nannochloropsis gaditana|type=CDS|length=1422bp|location=Sequence derived from alignment at KK037255.1:112458..113338- (Nannochloropsis gaditana)
AAAGTCCGGTCGCGTGGGGCCGAAATGCAACCAACCCTGGTACCCTCAGC
CAGTGCGACAAGAAATATGGCGCGAAAAAAATGAAACCATTGTGACCTTA
CTGGGATAGCTTGCGGCCTCTCCTTGACTTCGTTCTAATTCAAAATGTTG
AACCACCGTCCATGCATTCAAATATTGGAAAAGGGAGCAATATGACAAAA
AGAGACGTTTTGGGGCAGAGGAATGCCAGGGATGGGGGGGCGTCACAGTG
CATATGAAGCAACAGGCCGCCGAGCTCCTCCCCGGGCACGCGCGGAGGAC
GTTGATGGGCCAGGGCGGGAGGGAGGGCGGGCGGGAGGGCGGGAGGGAGG
CAGGGCTGGCTTTCATGCACCGGAACGCGCGGGCAGAGTACCAGCGAGGG
GTGATAGTGGGTATGGGAAGGCGGACGGTGCCCATGCCGGTAGGAGGGGC
GGAGGTGGTGGCACGCCAAGAAGAAAAGTCCGGTCGCGTGGGGCCGAAAT
GCAACCAACCCTGGTACCCTCAGCCAGTGCGACAAGAAATATGGCGCGAA
AAAAATGAAACCATTGTGACCTTACTGGGATAGCTTGCGGCCTCTCCTTG
ACTTCGTTCTAATTCAAAATGTTGAACCACCGTCCATGCATTCAAATATT
GGAAAAGGGAGCAATATGACAAAAAGAGACGTTTTGGGGCAGAGGAATGC
CAGGGATGGGGGGGCGTCACAGTGCATATGAAGCAACAGGCCGCCGAGCT
CCTCCCCGGGCACGCGCGGAGGACGTTGATGGGCCAGGGCGGGAGGGAGG
GCGGGCGGGAGGGCGGGAGGGAGGCAGGGCTGGCTTTCATGCACCGGAAC
GCGCGGGCAGAGTACCAGCGAGGGGTGATAGTGGGTATGGGAAGGCGGAC
GGTGCCCATGCCGGTAGGAGGGGCGGAGGTGGTGGCACGCCAAGAAGAAA
AGTCCGGTCGCGTGGGGCCGAAATGCAACCAACCCTGGTACCCTCAGCCA
GTGCGACAAGAAATATGGCGCGAAAAAAATGAAACCATTGTGACCTTACT
GGGATAGCTTGCGGCCTCTCCTTGACTTCGTTCTAATTCAAAATGTTGAA
CCACCGTCCATGCATTCAAATATTGGAAAAGGGAGCAATATGACAAAAAG
AGACGTTTTGGGGCAGAGGAATGCCAGGGATGGGGGGGCGTCACAGTGCA
TATGAAGCAACAGGCCGCCGAGCTCCTCCCCGGGCACGCGCGGAGGACGT
TGATGGGCCAGGGCGGGAGGGAGGGCGGGCGGGAGGGCGGGAGGGAGGCA
GGGCTGGCTTTCATGCACCGGAACGCGCGGGCAGAGTACCAGCGAGGGGT
GATAGTGGGTATGGGAAGGCGGACGGTGCCCATGCCGGTAGGAGGGGCGG
AGGTGGTGGCACGCCAAGAAGA
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Synonyms
Publications