EWM21037.1, cds9638 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|585101045|gb|EWM21037.1| (translation initiation factor if-2 [Nannochloropsis gaditana]) HSP 1 Score: 1382.08 bits (3576), Expect = 0.000e+0 Identity = 695/695 (100.00%), Postives = 695/695 (100.00%), Query Frame = 0
Query: 1 MVIPAVSPADLEAVEAARRKKEKEKLKKGGKYGEEERGGAIGKGGRGGGRKGGRFEGDVEDVDAVLGGGGSKYRKKGGRKGGRGGYEEPVAQGPKVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDKKK 695
MVIPAVSPADLEAVEAARRKKEKEKLKKGGKYGEEERGGAIGKGGRGGGRKGGRFEGDVEDVDAVLGGGGSKYRKKGGRKGGRGGYEEPVAQGPKVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDKKK
Sbjct: 1 MVIPAVSPADLEAVEAARRKKEKEKLKKGGKYGEEERGGAIGKGGRGGGRKGGRFEGDVEDVDAVLGGGGSKYRKKGGRKGGRGGYEEPVAQGPKVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDKKK 695
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|298705922|emb|CBJ29052.1| (PTIF2, plastid translation intiation factor 2 [Ectocarpus siliculosus]) HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0 Identity = 326/605 (53.88%), Postives = 442/605 (73.06%), Query Frame = 0
Query: 91 AQGPKVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQV-THAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFG--TDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVD 692
A P VV L PT+ ++ L+E M+VR E++K+LM+++G+MATITQSIDA+T +VA F +V +D D EE +SV G E + ++LPRAPVVTIMGHVDHGKTSLLDA+RE+ V GEAGGITQH+ AYQV T A +TF+DTPGHAAFSEMR RGAN TD+VVLVVAAD+GV EQT +SI A+ A VPI++A+NKVDK GAD +V ELM +D+L EE+GGD A VSAK++ LD LLEKILLQ+E+L+LK+NP+RSA G ++E+RME+GLG V TVL+Q+GTLRVGD VAG A+G+V++L D +G+R++ AGPS P + G+DGVP AGD VV+ E AR++AEARR++ RE S + G ++ +LSI D K+ E+ V+IKADVQGS +A+ TA+S + ED+ + K+L SGVG++T++DVA+AGVS A ++ FNV AD A EAR G++I Y++V+Y+++D ++AK+ E++SPTP+GEY G A VK++F IGKVG +AG V DG I +GG V V R IV++G L+TL+N+K D +M G ECG+ + +EDF+ D++ECY +D
Sbjct: 418 APAPAVVRLPGPTIVVSELAEMMEVRPAEVLKHLMLDLGIMATITQSIDADTARQVANNFEVEV-----DDGSSSFDEEEVVSVGDTGTAIEIDAEDTMLPRAPVVTIMGHVDHGKTSLLDAIRETKVVAGEAGGITQHVSAYQVKTDAGADLTFVDTPGHAAFSEMRVRGANATDIVVLVVAADDGVMEQTKESIATARMADVPIVVAINKVDKEGADVQKVQNELMTFDLLPEEFGGDTQVAMVSAKQKSGLDELLEKILLQSEVLELKSNPDRSAEGVIIEARMERGLGTVGTVLIQRGTLRVGDIFVAGGAWGRVKALIDHQGRRIKEAGPSTPVQVGGFDGVPDAGDVFTVVDREDIARDLAEARRKIARESSAAILQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAVVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 1017
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|219115513|ref|XP_002178552.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410287|gb|EEC50217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0 Identity = 314/595 (52.77%), Postives = 429/595 (72.10%), Query Frame = 0
Query: 98 VLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRS-LTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVS-QATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYV 690
+L + L++ L+E ++ + +IK+LM ++GVMA++TQ++D+ T V VAE FG+ G EE S L G ++E+D A L PRAPVVTIMGHVDHGKTSLLD +R++ V GEAGGITQHI AYQVT +TITF+DTPGHAAF++MR RGAN+TD++VLVVAAD+GVK+QT DSI CA+QA VP+++A+NK D ADP++V EL YDVL EE+GGDVLS+++SAKK N+D LL+KI+LQAEI D+KANP+R A VVE+ +EKGLG V T LVQKGTLRVGD VAG +GKVR+ L+ R++ GPS P + G++GVP AGD LIV + E AR +AE R+R+ RE+S S+ + V FG VK+ +E+ VV+KADVQGSAEA+ A+ + EDD+A V VKVL S G+V+++D+A+A V+ T++AFN+ A A E++R TGV IEY+ +IYD ++ +E+++QE+LSPTPEGEYVG+A+V+ VF IG G +AG T+G +K+G VRV+RG +I+ + ++TLRN K++ + G ECG+ D+E F PDD++ECYV
Sbjct: 1 MLPDGPLSVIDLAEILEEKPVSVIKFLMTDLGVMASMTQNLDSATCVAVAEGFGKI---GLEE------------SALATGVVFDEDDPADLKPRAPVVTIMGHVDHGKTSLLDTIRKTQVTAGEAGGITQHIAAYQVTRNDQTITFVDTPGHAAFTDMRERGANITDIIVLVVAADDGVKQQTADSIACARQAGVPLIVAINKCDLETADPTKVMTELTSYDVLTEEFGGDVLSSQISAKKGTNIDDLLDKIMLQAEIQDIKANPDRDAECIVVEANVEKGLGTVATTLVQKGTLRVGDVFVAGETHGKVRALLSTSNNDRMKEVGPSTPVRVVGFEGVPCAGDVLIVAKDEQTAREMAENRQRIAREKSSSSYQAGLMDSVAMTFG--AVKESREMCVVVKADVQGSAEALTRALRDLKREDDQAIVTVKVLVSEAGEVSKSDIAIASVTPDTTVIAFNIPASFAAMEDSRVTGVPIEYYNIIYDAIESVESRMQEVLSPTPEGEYVGSAKVQEVFNIGGTGNIAGSRCTNGFLKKGANVRVMRGDKILIESRIKTLRNFKAETDSIEEGNECGIGLLDFEAFEPDDVIECYV 578
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|1113390393|gb|OJW53412.1| (translation initiation factor IF-2 [Alphaproteobacteria bacterium 41-28]) HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0 Identity = 317/612 (51.80%), Postives = 443/612 (72.39%), Query Frame = 0
Query: 84 GGYEEPVAQGPKVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVT-HAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERE-RSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDK 693
G E+P + + V++ E +T+ L+ R+ R+ ++IK LM NMGVMATITQSIDA+T +A FG QV+R E D + G ++ED + + PR PVVTIMGHVDHGKTSLLDA+R++ V GEAGGITQHIGAYQV ++ ITFIDTPGHAAF+EMRARGANVTD+VVLVVAAD+GVK+QTI++IR AK A+VPI++A+NK+DKP ADP RV LM++++ LE+ GGD+L EVSAK+ LNLD L E ILLQAEILDLKA PNR A G VVES++E+G G V TVLVQKGTL+VGD VAGA +G+VR+L D+RG +++ AGPSVP + G++G P AGD +VV++E +AR V+E R+R RE +S + G+M+ Q+ + +K E+ V+IK+DVQGS EAI+ +++ + + EV V +L S VG++T++DV LA S A I+ FNV A+ A+E AR+ G+EI Y+++IYD++D ++A + +L+PT +Y+GAA ++ VF I KVGK+AGC VT+G +KRG VR+LR + ++++G L+TL+ K +V+E+ G ECGM+F++Y D + D +EC+ +++
Sbjct: 227 AGLEKPQQKVIREVIIPE-VITVQELASRLAERSSDVIKVLM-NMGVMATITQSIDADTAELIATEFGHQVKRVSESD-------------IEIGLHIKDEDLSQMKPRPPVVTIMGHVDHGKTSLLDALRKTDVVAGEAGGITQHIGAYQVILNSGDKITFIDTPGHAAFTEMRARGANVTDIVVLVVAADDGVKDQTIEAIRHAKAANVPIIIAINKIDKPEADPERVRNMLMQHEIFLEKVGGDILDVEVSAKQGLNLDKLEETILLQAEILDLKATPNRPAEGVVVESKLERGRGVVATVLVQKGTLKVGDLFVAGAEHGRVRALLDDRGNQIDEAGPSVPVEILGFNGAPMAGDDFVVVDNENRAREVSEFRQRQAREAKSALSARGTME-QMFTQIAAGEIK---ELPVIIKSDVQGSMEAISGSLTKLSTD----EVKVNILHSAVGEITESDVTLAKASHAIIIGFNVRANPQAREAARRDGIEIRYYSIIYDVVDDMKAALGGLLAPTLREKYLGAATIRNVFSISKVGKIAGCMVTEGIVKRGAKVRLLRDNIVIHEGTLKTLKRFKDEVKEVREGYECGMAFENYNDIKEGDTIECFEIEE 815
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|406989638|gb|EKE09404.1| (hypothetical protein ACD_16C00187G0005 [uncultured bacterium] >gi|1082268449|gb|OFW69309.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium GWC2_42_16] >gi|1082278714|gb|OFW74027.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium GWA2_41_27] >gi|1082294618|gb|OFW82996.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100] >gi|1082296564|gb|OFW84511.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium RBG_16_42_14] >gi|1082309079|gb|OFW90740.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium RIFCSPHIGHO2_12_42_13] >gi|1082310403|gb|OFW91981.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_30] >gi|1082335483|gb|OFX01171.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium RIFCSPLOWO2_02_42_7] >gi|1082340326|gb|OFX05704.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium RIFCSPLOWO2_02_FULL_43_54] >gi|1082347719|gb|OFX08375.1| translation initiation factor IF-2 [Alphaproteobacteria bacterium RIFCSPLOWO2_12_FULL_42_29]) HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0 Identity = 312/611 (51.06%), Postives = 439/611 (71.85%), Query Frame = 0
Query: 84 GGYEEPVAQGPKVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHR-TITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDK 693
G E P + + VV+ E +T+ LS R+ R ++IK LM MGVMATITQSIDA+T +A FG QV+R E D + G +ED L PR PVVT+MGHVDHGKTSLLDA+R++ V GEAGGITQHIGAYQVT + + ITFIDTPGHAAF+EMRARGANVTD+VVLVVAAD+GVK+QTI++I AK A+VPI++A+NK+DKPGA+P +V LM++++ LE+ GGD+L EVSAK LNL+ L E ILLQAEIL+LKANP+R+A G VVES++E+G G V+TVLVQKGTLRVGD VAGA YG+VR+L D+R +++ AGPSVP + G++G P AGD +VVE+E +AR ++E R R RE + ++ Q+ S +G + +E+ ++IK+DVQGS EAI+ +++ + E EV VK+L VG++T++DV LA S+A I+ FNV A+ A+E AR+ G+EI Y+++IYD++D ++A + +L+PT +Y+G A+++ +F I KVGKVAGC +T+G +KRG VR+LR + ++++G L+TL+ K +V+E+ G ECGM+F++Y D + +D +EC+ +++
Sbjct: 221 AGIEVPKQKVIREVVIPE-VITVQELSNRLAERGADVIKALM-KMGVMATITQSIDADTAELIATEFGHQVKRVSESD-------------IEIGLHIRDEDPVLLKPRPPVVTVMGHVDHGKTSLLDALRKTDVVAGEAGGITQHIGAYQVTLSSKDKITFIDTPGHAAFTEMRARGANVTDIVVLVVAADDGVKDQTIEAIHHAKAANVPIIIAINKMDKPGANPEQVRNMLMQHEIFLEKVGGDILDVEVSAKTGLNLNKLEETILLQAEILELKANPDRTAEGVVVESKLERGRGVVSTVLVQKGTLRVGDLFVAGAEYGRVRALIDDRSHQIDAAGPSVPVEVLGFNGAPMAGDDFVVVENENRAREISEFRHRRAREAKSAISVRDTMEQMFSKISEEG--EVRELPLIIKSDVQGSMEAISGSLARLSTE----EVKVKILHQAVGEITESDVTLAKASRAMIIGFNVRANPQAREAARRDGIEIRYYSIIYDVVDDIKAALGGLLAPTLREKYLGKAQIRNIFSIPKVGKVAGCMITEGLVKRGSKVRLLRDNIVIHEGSLKTLKRFKDEVKEVREGYECGMAFENYNDIKENDSIECFEIEE 810
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|1210513002|dbj|GAX28010.1| (translation initiation factor IF-2 [Fistulifera solaris]) HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0 Identity = 330/676 (48.82%), Postives = 465/676 (68.79%), Query Frame = 0
Query: 39 GAIGKGGR---GGGRKGGRFEGDVEDVDAV-----LGGGGSK-------YRKKGGRKGGRGGYEEPVAQGP---KVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSL--TDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATI-LAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDK 693
G I +G R G + GR + D ++ +GG GSK R+ ++ R G +E A+ K V L + +T+A L++ +D + IIK LM ++GVMA++TQS+D T V VA+ FG+ V +E E EG+ E V+ + E+++ SL PR PVVTIMGHVDHGKTSLLDA+R + V GEAGGITQHI +YQV H + ITFIDTPGHAAF++MR RGAN+TD+V+LVVAAD+ VK+QT+DSI CA+QA VP+++AVNK D ADP +V +L YDVL E++GGDVL + +SAKK NLD LL+K++LQAE+ +L+ANP+RSA V+E+ ++KGLG V T LV++GTLRVGD VAG YG+VR+L T + R++ AGPS P + G++G+PAAGD L+V E E AR +AE+R+R+ RERS S+ + + V FG K+R+E+ VV+KADVQGSAEA+ A+S + +E+D A VG+KVL S G++ ++D+++A V+ TI +AFN AA A E+AR G+ IEY+ +IYD ++ +E ++QE+LSPTP+GEYVGAA V+ VF IG G + G TDG +++GG VRVLRG +I+ + + +LRN K++V + G ECG+ ++EDF+P+D++EC+VV K
Sbjct: 141 GPIKEGARRRDGKPARRGRADDDTPKKNSAKNSLRVGGTGSKGRSAELTQRRGTLKRRDRAGEKEAKAEAALERKTVYLSDGAMTVAELADALDEKPVAIIKMLMTDLGVMASMTQSLDVATCVAVAQGFGKIVA-DVDESELEGDGSALETGVVLD----EDDNEESLRPRPPVVTIMGHVDHGKTSLLDAIRNTDVTAGEAGGITQHITSYQVKHNGQLITFIDTPGHAAFTDMRERGANITDMVILVVAADDSVKQQTVDSIMCARQAGVPLVVAVNKCDLETADPIKVMTDLTAYDVLTEDFGGDVLVSRISAKKGENLDDLLDKVMLQAEVQNLRANPDRSAECIVIEANVQKGLGTVATSLVKRGTLRVGDIFVAGETYGRVRALISTADGKTRMKEAGPSTPVNIVGFEGIPAAGDILVVSEDEQVARELAESRQRIARERSSSSYQAGLMSSVAMAFGPG--KERREMCVVVKADVQGSAEALTRALSELKLENDEAVVGIKVLVSEAGEINKSDISIASVTPGTIVIAFNCAASFAAMEDARAAGINIEYYNIIYDAIESVEKRMQEVLSPTPDGEYVGAAIVQEVFNIGGTGNIGGSRCTDGYLRKGGNVRVLRGDKILAESKIVSLRNFKAEVDSIEEGDECGIGLFEFEDFQPNDVIECFVVKK 809
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|1210511469|dbj|GAX29283.1| (translation initiation factor IF-2 [Fistulifera solaris]) HSP 1 Score: 604.749 bits (1558), Expect = 0.000e+0 Identity = 327/677 (48.30%), Postives = 466/677 (68.83%), Query Frame = 0
Query: 38 GGAIGKGGR---GGGRKGGRFEGDVEDVDAV-----LGGGGSK-------YRKKGGRKGGRGGYEEPVAQGP---KVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSL--TDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATI-LAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDK 693
G I +G R G + GR + D+ ++ +GG G K R+ ++ R G +E A+ K V L + +T+A L++ +D + IIK LM ++GVMA++TQS+D T + VA+ FG+ V +E E EG+ E V+ + E++D SL PR PVVTIMGHVDHGKTSLLDA+R + V GEAGGITQHI +YQV H + ITFIDTPGHAAF++MR RGAN+TD+V+LVVAAD+ VK+QT+DSI CA+QA VP+++AVNK D ADP +V +L YDVL E++GGDVL + +SAKK NLD LL+K++LQAEI +L+ANP+RSA V+E+ ++KGLG V T LV++GTLRVGD VAG YG+VR+L T + R++ AGPS P + G++G+PAAGD L+V + E AR +AE+R+R+ RERS S+ + + V FG K+R+E+ VV+KADVQGSAEA+ A+S + +E+D A VG+KVL S G++ ++D+++A V+ TI +AFN AA A E+AR G++IEY+ +IYD ++ ++ ++QE+LSPTP+GEYVG+A V+ VF IG G + G TDG +++GG VRVLRG +I+ + + +LRN K++V + G ECG+ ++EDF+P+D++EC+VV K
Sbjct: 195 AGPIKEGTRRRDGKPARRGRVDDDIPKKNSAKNSLRVGGTGRKGRSAELTQRRGTLKRRDRAGEKEAKAEAALERKTVYLSDGPMTVAELADALDEKPVAIIKMLMTDLGVMASMTQSLDVATCIAVAQGFGKIVA-DVDESELEGDGSALETGVVLD----EDDDEESLRPRPPVVTIMGHVDHGKTSLLDAIRNTDVTAGEAGGITQHITSYQVKHNGQLITFIDTPGHAAFTDMRERGANITDMVILVVAADDSVKQQTVDSIMCARQAGVPLVVAVNKCDLETADPIKVMTDLTAYDVLTEDFGGDVLVSRISAKKGENLDDLLDKVMLQAEIQNLRANPDRSAECIVIEANVQKGLGTVATSLVKRGTLRVGDIFVAGETYGRVRALISTADGKTRMKEAGPSTPVNIVGFEGIPAAGDILVVSDDEQVARELAESRQRIARERSSSSYQAGLMSSVAMAFGPG--KERREMCVVVKADVQGSAEALTRALSELKLENDEAVVGIKVLVSEAGEINKSDISIASVTPGTIVIAFNCAASFAAMEDARAAGIDIEYYNIIYDAIESVQKRMQEVLSPTPDGEYVGSAVVQEVFNIGGTGNIGGSRCTDGYLRKGGNVRVLRGDKILAESKIVSLRNFKAEVDSIEEGDECGIGLFEFEDFQPNDVIECFVVKK 864
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|224005394|ref|XP_002296348.1| (bacterial protein translation initiation factor 2 [Thalassiosira pseudonana CCMP1335] >gi|209586380|gb|ACI65065.1| bacterial protein translation initiation factor 2 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 604.749 bits (1558), Expect = 0.000e+0 Identity = 311/590 (52.71%), Postives = 427/590 (72.37%), Query Frame = 0
Query: 104 LTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGK-RLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQ-ATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVV 691
+T+ L+E + +IK+LMV++GVMA I+Q++D T VAE FG+ V +E + + +D ++E + L G W+E+D L+PR PVVTIMGHVDHGKTSLLDA+R + V GEAGGITQ I AYQV H ITFIDTPGHAAF++MR RGAN D+++LVVAAD+ VK+QT DSI CA+QA VP+L+AVNK+D P AD +RV +L Y+VL+E+ GG+VL +++SAK+ NLD LL KI+LQAE+LDLKANPNR A G V+E+R+EKGLG V T L+ KGT+RVGD VAG A GKVR+L GK RL+ AGPS+P ++G G+PAAGD ++V E E AR +A +R R+ RER S+ + V IF + G K+ +E+ VV+KADVQGSAEA+A ++S + +E++ EV +KVL S GDVT++D+A+A V+ T++AFN A++ A ++AR GV IEY++V+YD ++ +E ++QE+LSPTPEGEYVG+A V+ VF IG G +AG + DG IK+G VRVLRG +I+ + +RTLRN KS+V ++ G ECG+ DYE+F D++E +V+
Sbjct: 1 MTVGELAEAIGETPVSVIKFLMVDLGVMAAISQTLDPPTCEAVAEGFGKVVAGEDDEYDDDEDDEDDEDTALDLGVAWDEDDDEDLVPRPPVVTIMGHVDHGKTSLLDAIRNTRVTAGEAGGITQAINAYQVEHEGSPITFIDTPGHAAFTDMRERGANTADMIILVVAADDSVKQQTADSIACARQAGVPLLVAVNKIDLPTADVNRVLSDLAGYEVLVEDLGGEVLCSQISAKEGTNLDDLLGKIMLQAEVLDLKANPNRDAQGVVIEARVEKGLGTVATTLITKGTIRVGDSFVAGEASGKVRALIGPDGKTRLKEAGPSMPISITGITGIPAAGDLMVVAEDEQTARELAASRSRIARERQSSSYQSGLMQSVAGIF-SGGQKELREICVVVKADVQGSAEALARSLSELKLENEEVEVKIKVLISEAGDVTKSDIAVASVTPGTTVIAFNAGANVAAMDDARMLGVPIEYYSVVYDAIESVECRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCRDGIIKKGSNVRVLRGDKILTESKVRTLRNFKSEVDTITTGDECGIGLLDYEEFEVGDVIESFVL 589
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|568207430|ref|WP_024081794.1| (translation initiation factor IF-2 [Magnetospirillum gryphiswaldense] >gi|566557642|emb|CDL00867.1| Translation initiation factor IF-2 [Magnetospirillum gryphiswaldense MSR-1 v2]) HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0 Identity = 308/593 (51.94%), Postives = 421/593 (70.99%), Query Frame = 0
Query: 103 TLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVT-HAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERE-RSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDK 693
++T+ L+ RM R G++IK LM MGVMATI QSID +T V FG V+R E D G +G+ +++D L+ R PVVTIMGHVDHGKTSLLDA+RE+ V +GEAGGITQHIGAYQVT + ITFIDTPGH AF+ MRARGA VTD+VVLVVAAD+G+ QT+++IR AK A VPI++A+NK+DKPGA P RV QEL+++D++ EE GGDVL+ EVSAKKR+NL+ L E ILLQAE+LDLKANP+R+A G VVE++MEKG GPV TVLVQKG+L+VGD VAG+ +GKVR+L D++G R+E AGPS P + G DG PAAGD + VE E +AR +A R+R+ERE RS A G+++ +F + +E+ VV+K DVQGS EAI A++ I + V ++VL S VG V+++D+ LA + I+ FNV A+ A++ AR+ GV+I Y+++IYD+ D ++ + +L+PT + ++G A ++ VF I K GKVAGC +T+GT+KRG VR+LR + ++++G L L+ K DV+E+ G ECGMSF +YED R D++EC+ +++
Sbjct: 312 SITVQELANRMAARGGDVIKCLM-RMGVMATINQSIDPDTAELVVAEFGHNVKRVSEADVLVGLEGD-----------VDQDDV--LISRPPVVTIMGHVDHGKTSLLDALRETDVVSGEAGGITQHIGAYQVTMRSGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAADDGIMPQTVEAIRHAKAAGVPIIVAINKIDKPGATPERVRQELLQHDLVTEELGGDVLAVEVSAKKRMNLEKLEEAILLQAEVLDLKANPDRTAQGTVVEAKMEKGRGPVATVLVQKGSLKVGDVFVAGSEWGKVRALIDDKGNRVEEAGPSTPVEVLGLDGAPAAGDDFVAVEDEARAREIAGYRQRVEREARSKLAARGTLE----QMFSAIKAGEAKELPVVVKGDVQGSVEAINGALAKIGND----LVKMRVLHSAVGPVSESDITLAKATGGIIIGFNVRANPQARDMARRDGVDIRYYSIIYDVTDDMKTMLSGMLAPTLKENFLGYASIREVFNITKTGKVAGCMITEGTVKRGAGVRLLRENVVIHQGHLAQLKRFKDDVKEVREGYECGMSFTNYEDIRVGDVIECFEIEE 882
BLAST of EWM21037.1 vs. NCBI_GenBank
Match: gi|1086357874|emb|SDH38322.1| (translation initiation factor IF-2 [Roseospirillum parvum]) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 310/590 (52.54%), Postives = 413/590 (70.00%), Query Frame = 0
Query: 103 TLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAH-RTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNKVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSG--SATMGSMQAQVLSIFGTDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECY 689
T+T+ L+ RM R +IK LM MGVMATITQSIDA+T V E FG + +R + D + G ++DA L RAPVVT+MGHVDHGKTSLLDA+R++ V +GEAGGITQHIGAYQVT + ITFIDTPGHAAF+ MRARGA VTD+V+LVVAAD+G+ QT+++IR AK A VPI++AVNK+DKP ADP+RV EL+ +D+ +EE GG+VLS EVSAK++LNLD L E ILLQ+E+LDLKANP RSA G V+E++MEKG G + T+LV +GTLRVGD VAG +G+VR++ DERG+R++ AGP+VP + G+ G P AGD +VVE E +AR VAE R+R ERE SA GS Q +F + +E+ VVIKADVQGSAEA+ + + + EV V+VL S VG + ++DV LA S A I+ FNV A+ A++ AR+ GV+I Y+++IYD+ D ++ + +LSPT + ++G A+++ VF I KVGKVAGC VT+G IKRG VR+LR ++++G L L+ K DV+E+ G ECGMSF +Y D + D++EC+
Sbjct: 304 TVTVQELANRMAERGANVIKALM-KMGVMATITQSIDADTAELVVEEFGHKAKRVADSD-------------IEIGLVAPQDDADKLTSRAPVVTVMGHVDHGKTSLLDALRQTDVVSGEAGGITQHIGAYQVTRPSGQKITFIDTPGHAAFTAMRARGAKVTDIVILVVAADDGIMPQTVEAIRHAKAAEVPIVVAVNKIDKPDADPNRVRTELLNHDIQVEEMGGEVLSVEVSAKQKLNLDKLEEAILLQSELLDLKANPERSAEGTVIEAKMEKGRGSIATILVTRGTLRVGDVFVAGKEWGRVRAMVDERGQRIDEAGPAVPVEVLGFAGTPDAGDDFVVVEDEARAREVAEYRQRKEREALAVKSARGGSSMEQ---LFAAIQAGETKELPVVIKADVQGSAEALVGTLEKLGTD----EVKVRVLHSAVGGINESDVTLAKASNALIIGFNVRANPQARDLARRDGVDIRYYSIIYDVADDMKQALTGMLSPTFKESFLGYAQIREVFSITKVGKVAGCMVTEGQIKRGCKVRLLRDDVVIHEGDLGQLKRFKDDVKEVKEGYECGMSFANYHDIQVGDMIECF 872 The following BLAST results are available for this feature:
BLAST of EWM21037.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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