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Properties
| Property Name | Value |
| Product | translation initiation factor if-2 |
| Orig transcript id | gnl|cribi|Naga_100422g3.3151.mrna |
| Orig protein id | gnl|cribi|Naga_100422g3.3151 |
| Gene | PTIF2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| KK037255.1 | supercontig | KK037255.1:106395..109535 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9669 ID=rna9669|Name=rna9669|organism=Nannochloropsis gaditana|type=mRNA|length=342bp ATGGATGTCTACTCTCAGCAAACCAGCGTCGTCGAGCACAGCTTACTCTC TTCTCGGCAAAACTGTCACGGCAGATCGGCGGACGCCTGTGTCGGAGTGC GCAGACAGGCCCAGGCAGTACAGTGCCTCTCGCCAGATATCATGGCGCAT ACTAGTGATGTGGCAGCAGGAACCTCAGAAAGTAAATGTTTTCCCTCCAT ACCTGCTGAAAACACATGCTCTACCGATCCCAGTCGGAGGAAAGGAGCAC GAAGGACCTTGGCCGTGGCGGTAGTGGGTTGCCTTTGCCTGGGGTGGGCC TCGGCGTTCCGGCCGTCGTTTCCGGGACAGATGGGTGCGTGA back to topprotein sequence of rna9669 >rna9669-protein ID=rna9669-protein|Name=rna9669|organism=Nannochloropsis gaditana|type=polypeptide|length=695bp MVIPAVSPADLEAVEAARRKKEKEKLKKGGKYGEEERGGAIGKGGRGGGR KGGRFEGDVEDVDAVLGGGGSKYRKKGGRKGGRGGYEEPVAQGPKVVVLD EPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAF GRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMG HVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQVTHAHRTITFIDTPGH AAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVN KVDKPGADPSRVTQELMKYDVLLEEYGGDVLSAEVSAKKRLNLDGLLEKI LLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIV AGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEM QARNVAEARRRLERERSGSATMGSMQAQVLSIFGTDGVKKRQEVTVVIKA DVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQA TILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPE GEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGP LRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDKKK back to topmRNA from alignment at KK037255.1:106395..109535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9669 ID=rna9669|Name=rna9669|organism=Nannochloropsis gaditana|type=mRNA|length=3141bp|location=Sequence derived from alignment at KK037255.1:106395..109535+ (Nannochloropsis gaditana) atggtgaTCCCTGCGGTGTCCCCGGCGGatttggaggcggtggaggcggc
gcgtcggaagaaggagaaggagaagttgaagaagggaggcaagtatgggg
aggaagagcgggggggggcgatagggaaaggggggaggggcggggggagg
aaggggggaaggttcgagggcgacgtggaggacgtggacgctgttttggg
ggggggagggagcaagtaccggaagaaggggggaaggaagggcggcaggG
GGGGATACGAAGAGCCCGTGGCCCAAGGGCccaaggtggtggtgctggat
GAACCTACCTTAACCATCGCCGCCCTGAGCGAGCGGATGGACGTGCGGGC
GGGCGAAATCATCAAGTACCTTATGGTAAACATGGGGGTGATGGCGACGA
TCACCCAGAGCATCGACGCGGAGACGGGGGtgcgggtggcggaggccttT
GGCCGGCAGGtccggcgggggcgggaggaggacgagggggagggggagga
cggggaggaggaactgAGCGTGCTCACGGAGGGGTAcggttgggaggagg
aggacgccgcgagcctcctcccacgcgccCCCGTGGTGACGATTATGGGC
CACGTCGACCACGGGAAGACGAGTTTGCTGGACGCTGTGCGGGAGTCGAG
CGTTGCcacgggggaggcgggcgggatcACGCAGCACATTGGGGCCTAcc
aggtgggggagggggcattCATTTTTGACAGCAAGAGATTTTTCCCTCGA
TTTATATTCTGTAACCCCTGAAATTTCAACGATTAactttccccgcccct
ctcttgACCACATTgaaaaaaaattaaaaaacCCGATGGCTTTCTCCACC
GAAACAATCCCCAAAAATTCACCGTCCCTGcactcctccccgcctcgcct
cccccccctccaggtcACCCACGCTCACCGCACCATCACCTTCATCGACA
CCCCCGGCCATGCCGCTTTCTCGGAAATGCGGGCCCGGGGCGCGAACGTG
ACGGACCTGGTCGtcctggtggtggcggcggacGAAGGCGTGAAAGAGCA
GACCATCGACTCCATCCGCTGCGCCAAGCAGGCCCACGTGCCCATCCTCC
TGGCCGTGAACAAGGTGGACAAGCCGGGGGCGGACCCATCCCGGGTGACG
CAGGAGCTGATGAAGGTgaggggtggggatggctgtggggggcggggagg
gtgtgTTTGCTCGttgttggggggggggaagtatGTCTGGGTCGCGTCTC
CCGGCGATCGCGTCCTTGGACCCCACTtacacccttcctccctccctccc
tccctccctccctccctccctccctccctccccagtaCGACGTGCTCTTG
GAAGAGTACGGGGGCGACGTCCTTTCCGCCGAGGTCTCGGCCAAGAAGCG
CTTGAACCTGGACGGTCTTCTCGAGAAGATCCTCTTGCAGGCGGAAATTC
TGGATTTGAAGGCAAACCCGAACCGGTCCGCGGtcggggcggtggtggag
tcCCGGATGGAGAAAGGCTTGGGCCCGGTTACCACGGTCCTGGTGCAGAA
AGGCACCTTGCGCGTCGGGGATTGCATCGTGGCCGGGGCTGCCTACGGAA
AAGTCCGAAGCCTCACGGACGAACGGGGGAAACGGCTGGAAACGGCGGGG
CCCTCGGTGCCGGCCGTGCTGAGCGGGTGGGATGGAGTCCCTGCCGCGGG
CGATACTTTGATCGTGGTGGAAAGCGAAATGCAAGCCCGGAATGTGGCGG
AGGCCCGCCGGCGCTTGGAACGGGAGCGATCGGGGAGTGCGACCATGGGG
AGCATGCAGGCCCAAGTCCTGTCGATATTCGGTACGGACGGGGTGAAAAA
ACGCCAGGAGGTGACGGTGGTGATCAAAGCCGACGTCCAAGGCTCCGCGG
AAGCCATCGCCACGGCCGTGAGTGCCATCCACGTGGAGGACGACCGGGCG
GAAGTTGGGGTTAAGGTGTTGTCATCGGGCGTAGGGGATGTCACCCAGAA
CGACGTGGCGTTGGCAGGCGTCAGCCAAGCCACGATTTTGGCCTTCAATG
TGGCGGCGGACATGAACGCACAGGAGGAAGCCCGGAAGACGGGGGTGGAG
ATCGAGTACCACACGGTGATCTACGACATCTTGGACAAGTTGGAGGCGAA
GGTGCAAGAGATCTTGTCCCCGACGCCGGAGGGTGAGTACGTGGGCGCGG
CCCGGGTGAAAATGGTGTTTGAAATCGGGAAAGTCGGGAAGGTGGCGGGC
TGCGAGGTCACGGACGGGACGATCAAGCGGGGGGGCACGGTCCGGGTCTT
GCGGGGGAGCGAGATCGTCTACAAGGGCCCTCTGCGCACCCTCCGGAACG
TCAAGAGCGATGTGCAGGAGATGAGCGCGGGTCAGGAGTGCGGGATGAGC
TTCAAGGACTACGAGGACTTCCGGCCCGACGACATTGTCGAGTGCTACGT
ggtggacaagaagaagtagggcgggagggagggcgggggggagggcgagg
gggagggcggggcgaggGGCCGATGCCCCGGATCTTAAACCAGAAGAGCG
CTACTTgtgaagggatggagagaaggcggtagtgggtgggaggatggaga
ggggccaAAGGGGGcccagagggaaggaaggagaggaagggcgtcggggg
gaggacgggcgacGGTCGAATCTctcgacgtggaggagggaggggggaag
ggagggagaaagggaggtaaGGACGGTGGCAGGGTGGACGAAGGCCTCTT
TCTTGttgaagggagggtggagaggggacAGGACTACTTGCACGGCTTAT
CCCtcttggggagggagggagggagggagggagggaggaagggcgtgcgA
AGGTGTTGTTGGTTGGGAGGGGTGCggatggagaggggatgGGTGTCAAA
AATGTggtcgaggggaaggaaagctccATTTGAGAGGAGTTCCTGGGCCG
GGAAGGtgatggatgtggaagggCATACGACGGGGATTTTCGGCGGGATT
AGCTGAgtaaggggaaagaaggagcgaggagcGTAATGGTAAAGTCTtga
caagggaggaagtggctaAAAAGAGATTGAAAGAAGGTTTTTGCATCATG
GCAGGCGATCGGAGCCGACGTGGTTGTTGAGATTTTATTTC back to topCoding sequence (CDS) from alignment at KK037255.1:106395..109535+ >rna9669 ID=rna9669|Name=rna9669|organism=Nannochloropsis gaditana|type=CDS|length=6264bp|location=Sequence derived from alignment at KK037255.1:106395..109535+ (Nannochloropsis gaditana) atggtgaTCCCTGCGGTGTCCCCGGCGGatttggaggcggtggaggcggc gcgtcggaagaaggagaaggagaagttgaagaagggaggcaagtatgggg aggaagagcgggggggggcgatagggaaaggggggaggggcggggggagg aaggggggaaggttcgagggcgacgtggaggacgtggacgctgttttggg ggggggagggagcaagtaccggaagaaggggggaaggaagggcggcaggG GGGGATACGAAGAGCCCGTGGCCCAAGGGCccaaggtggtggtgctggat GAACCTACCTTAACCATCGCCGCCCTGAGCGAGCGGATGGACGTGCGGGC GGGCGAAATCATCAAGTACCTTATGGTAAACATGGGGGTGATGGCGACGA TCACCCAGAGCATCGACGCGGAGACGGGGGtgcgggtggcggaggccttT GGCCGGCAGGtccggcgggggcgggaggaggacgagggggagggggagga cggggaggaggaactgAGCGTGCTCACGGAGGGGTAcggttgggaggagg aggacgccgcgagcctcctcccacgcgccCCCGTGGTGACGATTATGGGC CACGTCGACCACGGGAAGACGAGTTTGCTGGACGCTGTGCGGGAGTCGAG CGTTGCcacgggggaggcgggcgggatcACGCAGCACATTGGGGCCTAcc aggtcACCCACGCTCACCGCACCATCACCTTCATCGACACCCCCGGCCAT GCCGCTTTCTCGGAAATGCGGGCCCGGGGCGCGAACGTGACGGACCTGGT CGtcctggtggtggcggcggacGAAGGCGTGAAAGAGCAGACCATCGACT CCATCCGCTGCGCCAAGCAGGCCCACGTGCCCATCCTCCTGGCCGTGAAC AAGGTGGACAAGCCGGGGGCGGACCCATCCCGGGTGACGCAGGAGCTGAT GAAGtaCGACGTGCTCTTGGAAGAGTACGGGGGCGACGTCCTTTCCGCCG AGGTCTCGGCCAAGAAGCGCTTGAACCTGGACGGTCTTCTCGAGAAGATC CTCTTGCAGGCGGAAATTCTGGATTTGAAGGCAAACCCGAACCGGTCCGC GGtcggggcggtggtggagtcCCGGATGGAGAAAGGCTTGGGCCCGGTTA CCACGGTCCTGGTGCAGAAAGGCACCTTGCGCGTCGGGGATTGCATCGTG GCCGGGGCTGCCTACGGAAAAGTCCGAAGCCTCACGGACGAACGGGGGAA ACGGCTGGAAACGGCGGGGCCCTCGGTGCCGGCCGTGCTGAGCGGGTGGG ATGGAGTCCCTGCCGCGGGCGATACTTTGATCGTGGTGGAAAGCGAAATG CAAGCCCGGAATGTGGCGGAGGCCCGCCGGCGCTTGGAACGGGAGCGATC GGGGAGTGCGACCATGGGGAGCATGCAGGCCCAAGTCCTGTCGATATTCG GTACGGACGGGGTGAAAAAACGCCAGGAGGTGACGGTGGTGATCAAAGCC GACGTCCAAGGCTCCGCGGAAGCCATCGCCACGGCCGTGAGTGCCATCCA CGTGGAGGACGACCGGGCGGAAGTTGGGGTTAAGGTGTTGTCATCGGGCG TAGGGGATGTCACCCAGAACGACGTGGCGTTGGCAGGCGTCAGCCAAGCC ACGATTTTGGCCTTCAATGTGGCGGCGGACATGAACGCACAGGAGGAAGC CCGGAAGACGGGGGTGGAGATCGAGTACCACACGGTGATCTACGACATCT TGGACAAGTTGGAGGCGAAGGTGCAAGAGATCTTGTCCCCGACGCCGGAG GGTGAGTACGTGGGCGCGGCCCGGGTGAAAATGGTGTTTGAAATCGGGAA AGTCGGGAAGGTGGCGGGCTGCGAGGTCACGGACGGGACGATCAAGCGGG GGGGCACGGTCCGGGTCTTGCGGGGGAGCGAGATCGTCTACAAGGGCCCT CTGCGCACCCTCCGGAACGTCAAGAGCGATGTGCAGGAGATGAGCGCGGG TCAGGAGTGCGGGATGAGCTTCAAGGACTACGAGGACTTCCGGCCCGACG ACATTGTCGAGTGCTACGTggtggacaagaagaagtagatggtgaTCCCT GCGGTGTCCCCGGCGGatttggaggcggtggaggcggcgcgtcggaagaa ggagaaggagaagttgaagaagggaggcaagtatggggaggaagagcggg ggggggcgatagggaaaggggggaggggcggggggaggaaggggggaagg ttcgagggcgacgtggaggacgtggacgctgttttgggggggggagggag caagtaccggaagaaggggggaaggaagggcggcaggGGGGGATACGAAG AGCCCGTGGCCCAAGGGCccaaggtggtggtgctggatGAACCTACCTTA ACCATCGCCGCCCTGAGCGAGCGGATGGACGTGCGGGCGGGCGAAATCAT CAAGTACCTTATGGTAAACATGGGGGTGATGGCGACGATCACCCAGAGCA TCGACGCGGAGACGGGGGtgcgggtggcggaggccttTGGCCGGCAGGtc cggcgggggcgggaggaggacgagggggagggggaggacggggaggagga actgAGCGTGCTCACGGAGGGGTAcggttgggaggaggaggacgccgcga gcctcctcccacgcgccCCCGTGGTGACGATTATGGGCCACGTCGACCAC GGGAAGACGAGTTTGCTGGACGCTGTGCGGGAGTCGAGCGTTGCcacggg ggaggcgggcgggatcACGCAGCACATTGGGGCCTAccaggtcACCCACG CTCACCGCACCATCACCTTCATCGACACCCCCGGCCATGCCGCTTTCTCG GAAATGCGGGCCCGGGGCGCGAACGTGACGGACCTGGTCGtcctggtggt ggcggcggacGAAGGCGTGAAAGAGCAGACCATCGACTCCATCCGCTGCG CCAAGCAGGCCCACGTGCCCATCCTCCTGGCCGTGAACAAGGTGGACAAG CCGGGGGCGGACCCATCCCGGGTGACGCAGGAGCTGATGAAGtaCGACGT GCTCTTGGAAGAGTACGGGGGCGACGTCCTTTCCGCCGAGGTCTCGGCCA AGAAGCGCTTGAACCTGGACGGTCTTCTCGAGAAGATCCTCTTGCAGGCG GAAATTCTGGATTTGAAGGCAAACCCGAACCGGTCCGCGGtcggggcggt ggtggagtcCCGGATGGAGAAAGGCTTGGGCCCGGTTACCACGGTCCTGG TGCAGAAAGGCACCTTGCGCGTCGGGGATTGCATCGTGGCCGGGGCTGCC TACGGAAAAGTCCGAAGCCTCACGGACGAACGGGGGAAACGGCTGGAAAC GGCGGGGCCCTCGGTGCCGGCCGTGCTGAGCGGGTGGGATGGAGTCCCTG CCGCGGGCGATACTTTGATCGTGGTGGAAAGCGAAATGCAAGCCCGGAAT GTGGCGGAGGCCCGCCGGCGCTTGGAACGGGAGCGATCGGGGAGTGCGAC CATGGGGAGCATGCAGGCCCAAGTCCTGTCGATATTCGGTACGGACGGGG TGAAAAAACGCCAGGAGGTGACGGTGGTGATCAAAGCCGACGTCCAAGGC TCCGCGGAAGCCATCGCCACGGCCGTGAGTGCCATCCACGTGGAGGACGA CCGGGCGGAAGTTGGGGTTAAGGTGTTGTCATCGGGCGTAGGGGATGTCA CCCAGAACGACGTGGCGTTGGCAGGCGTCAGCCAAGCCACGATTTTGGCC TTCAATGTGGCGGCGGACATGAACGCACAGGAGGAAGCCCGGAAGACGGG GGTGGAGATCGAGTACCACACGGTGATCTACGACATCTTGGACAAGTTGG AGGCGAAGGTGCAAGAGATCTTGTCCCCGACGCCGGAGGGTGAGTACGTG GGCGCGGCCCGGGTGAAAATGGTGTTTGAAATCGGGAAAGTCGGGAAGGT GGCGGGCTGCGAGGTCACGGACGGGACGATCAAGCGGGGGGGCACGGTCC GGGTCTTGCGGGGGAGCGAGATCGTCTACAAGGGCCCTCTGCGCACCCTC CGGAACGTCAAGAGCGATGTGCAGGAGATGAGCGCGGGTCAGGAGTGCGG GATGAGCTTCAAGGACTACGAGGACTTCCGGCCCGACGACATTGTCGAGT GCTACGTggtggacaagaagaagtagatggtgaTCCCTGCGGTGTCCCCG GCGGatttggaggcggtggaggcggcgcgtcggaagaaggagaaggagaa gttgaagaagggaggcaagtatggggaggaagagcgggggggggcgatag ggaaaggggggaggggcggggggaggaaggggggaaggttcgagggcgac gtggaggacgtggacgctgttttgggggggggagggagcaagtaccggaa gaaggggggaaggaagggcggcaggGGGGGATACGAAGAGCCCGTGGCCC AAGGGCccaaggtggtggtgctggatGAACCTACCTTAACCATCGCCGCC CTGAGCGAGCGGATGGACGTGCGGGCGGGCGAAATCATCAAGTACCTTAT GGTAAACATGGGGGTGATGGCGACGATCACCCAGAGCATCGACGCGGAGA CGGGGGtgcgggtggcggaggccttTGGCCGGCAGGtccggcgggggcgg gaggaggacgagggggagggggaggacggggaggaggaactgAGCGTGCT CACGGAGGGGTAcggttgggaggaggaggacgccgcgagcctcctcccac gcgccCCCGTGGTGACGATTATGGGCCACGTCGACCACGGGAAGACGAGT TTGCTGGACGCTGTGCGGGAGTCGAGCGTTGCcacgggggaggcgggcgg gatcACGCAGCACATTGGGGCCTAccaggtcACCCACGCTCACCGCACCA TCACCTTCATCGACACCCCCGGCCATGCCGCTTTCTCGGAAATGCGGGCC CGGGGCGCGAACGTGACGGACCTGGTCGtcctggtggtggcggcggacGA AGGCGTGAAAGAGCAGACCATCGACTCCATCCGCTGCGCCAAGCAGGCCC ACGTGCCCATCCTCCTGGCCGTGAACAAGGTGGACAAGCCGGGGGCGGAC CCATCCCGGGTGACGCAGGAGCTGATGAAGtaCGACGTGCTCTTGGAAGA GTACGGGGGCGACGTCCTTTCCGCCGAGGTCTCGGCCAAGAAGCGCTTGA ACCTGGACGGTCTTCTCGAGAAGATCCTCTTGCAGGCGGAAATTCTGGAT TTGAAGGCAAACCCGAACCGGTCCGCGGtcggggcggtggtggagtcCCG GATGGAGAAAGGCTTGGGCCCGGTTACCACGGTCCTGGTGCAGAAAGGCA CCTTGCGCGTCGGGGATTGCATCGTGGCCGGGGCTGCCTACGGAAAAGTC CGAAGCCTCACGGACGAACGGGGGAAACGGCTGGAAACGGCGGGGCCCTC GGTGCCGGCCGTGCTGAGCGGGTGGGATGGAGTCCCTGCCGCGGGCGATA CTTTGATCGTGGTGGAAAGCGAAATGCAAGCCCGGAATGTGGCGGAGGCC CGCCGGCGCTTGGAACGGGAGCGATCGGGGAGTGCGACCATGGGGAGCAT GCAGGCCCAAGTCCTGTCGATATTCGGTACGGACGGGGTGAAAAAACGCC AGGAGGTGACGGTGGTGATCAAAGCCGACGTCCAAGGCTCCGCGGAAGCC ATCGCCACGGCCGTGAGTGCCATCCACGTGGAGGACGACCGGGCGGAAGT TGGGGTTAAGGTGTTGTCATCGGGCGTAGGGGATGTCACCCAGAACGACG TGGCGTTGGCAGGCGTCAGCCAAGCCACGATTTTGGCCTTCAATGTGGCG GCGGACATGAACGCACAGGAGGAAGCCCGGAAGACGGGGGTGGAGATCGA GTACCACACGGTGATCTACGACATCTTGGACAAGTTGGAGGCGAAGGTGC AAGAGATCTTGTCCCCGACGCCGGAGGGTGAGTACGTGGGCGCGGCCCGG GTGAAAATGGTGTTTGAAATCGGGAAAGTCGGGAAGGTGGCGGGCTGCGA GGTCACGGACGGGACGATCAAGCGGGGGGGCACGGTCCGGGTCTTGCGGG GGAGCGAGATCGTCTACAAGGGCCCTCTGCGCACCCTCCGGAACGTCAAG AGCGATGTGCAGGAGATGAGCGCGGGTCAGGAGTGCGGGATGAGCTTCAA GGACTACGAGGACTTCCGGCCCGACGACATTGTCGAGTGCTACGTggtgg acaagaagaagtag back to top
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