rna9647, rna9647 (mRNA) Nannochloropsis gaditana

Overview
Namerna9647
Unique Namerna9647
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length731
Alignment locationKK037255.1:48969..50280 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101462g2.3665.mrna
Orig protein idgnl|cribi|Naga_101462g2.3665
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:48969..50280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101462g2gene9367Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9647rna9647-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21058.1cds9616Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9647 ID=rna9647|Name=rna9647|organism=Nannochloropsis gaditana|type=mRNA|length=731bp
TGTGCGTGGGGTTTTGTGGGTGTTTTGGGGAAAAGAAAGGGGAAGTAGCT
GATGACCGTCGTTTCAGGGGGTATCACCCCAAGCTCCTGATGCTGAGGAA
AAACCTATTCTTTCCAAGACACATTATATCACCGACTATGTCCTCTACGT
CCTTGGATGGTGCGAGGCAGCGTGTGCAAAGCCAGGAGAGTAGTTATGAT
GTCGTTTGTCCCGGACATTTTTTTGCGTATGACGACGATCATGGTTGAAC
CTCTTCAGGCACGGGATGCTTGCCTCCCCTTCATTCATCCAAGCATCAAT
CGCCACCGTCCTTTCTTATTCTACCAGCTACAAAAGATCCGACGCCACCT
CACCTGGGCGAAGCTGCCTCTTTGCGTTGGCGTCCCGTACGTCACCCGTC
TTATCCATTTCTCCCCCCTCCTCCTTCCTTGCACCTCTGTGTTTCAGATT
CCCTGCCCGCCTGCCCTCTTCCGCTCGCATGGACGGACAACTCCATGTTG
ACCGGCCGCAGATCGCCATTTTGGATTTTGGCTCCCAGTACTCCCATCTG
ATTGCCCGGCGGGTGCGTGAGCTGCACGTGTTTTGCGAGCTGTATTCCTG
CCTGGTGAAAGGCGAAGTCTTGCGGAAAAATCAGGTGGTAGGGATTATTC
TGTCAGGGGGGCCGAATTCCGTCTATGCGGTGAGTAGAGGGTGCGCGTGA
AGGAGAAAAAAAGGGGGCAATGGAGACCCGG
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protein sequence of rna9647

>rna9647-protein ID=rna9647-protein|Name=rna9647|organism=Nannochloropsis gaditana|type=polypeptide|length=108bp
MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSI
FSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAP
TKESAGCK
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mRNA from alignment at KK037255.1:48969..50280-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9647 ID=rna9647|Name=rna9647|organism=Nannochloropsis gaditana|type=mRNA|length=1312bp|location=Sequence derived from alignment at KK037255.1:48969..50280- (Nannochloropsis gaditana)
CTTCTTTCCTCATTTTTGACCCCTACTGTCCAGTGGGAAAGACGCGACGG
GGTTTGATCTTTCCGGCGCCATCATGGCAGAAGGTACTTTCAAGAAGGTC
AATTTCAAGGAGGCCGTTTTGAGCAAGGCCTACGCCAAGGTACCCCCCTC
CCTCCCCCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCTTCC
TTTCCTCTTGCCTTACCCGCTCTTGTTTTGGGAACCTCCAGGCTGCAGAT
TTCGAAGGCGCAGATTTCAGTAACGCGGTCGTCGATCGTGTCTCGTTCGA
CGGGTCGAACCTGAAGGTACGGAGGGAGGGAGGGATCGAGGGAGGGGAGG
GGAAGCAGGGAAGAATCTGGCACGCCGGACTTGACCGGATGGCCGTTGTC
CAAGGGACGACTGCTTTACCATGCATGGCTGACGCATAGAGCACCACCCC
GGACCGGCAGGGCTCCATTTTTAGCAACGCCGTGCTCTCCGGTACCTCCT
TTGTCGGCGCGGATTTAACGGACAGCGATTTCACCGACACGTACATGGGA
GAATTCAACTTGAGGGAGCTCTGCAAGAATCCGACGCTGAAGGGAACAAA
TCCGGTCACACAGGCCCCCACGAAGGAAAGTGCTGGCTGTAAATGAAGGG
AGTACTTGGGCTTTGGAGGGAGGGGAGAAGGGGAGGGAGGGTCTCCAAAG
GCATGAGCGCCCGACGGAAACAGAGGTGAAAAAAGGGACTTGGGCCACAG
GGCAGGGACGTGGGAGATACACAAGGGCTCTCTGATGACCCCGCTGCGCA
TGGAAGAGGTTAAAGTGAAATGTACGTTCACTGAGCCGAAGAGTCTCTTG
ATGTTGTGAGCCTCGCATGCCGTGAAAATACCGACGCCTCTTCGCTTGCA
GACGTCACGGCCTTTGTTGTCATATAAGGCAGAAAGCGACCCCCCAAAAT
AATGCCAATCGAGATGTTCACGCCACCGAAGGCCTTTTCTGGCTGGCATC
ATGGCTTGATCACCATGCTGGACATCTCTCCGTGCTGAATACCGCCGAGA
TTTTTTTCTTTTTTTCTATTTAAGGGGAAAGAAAGCGTGACCTCCATCAA
TACTTGTCTCCCAAAGGCGTACAGACGTCACTTTTCTGCCATTCTGTCAT
CAACAGTATTCCTCGCCGCCTTCTCTCTACACGATGCGTGACCACCATGG
TGTGACAACACGGACCTTGCCTTGTTGACTTTCACTGTCGCCAGGCCTCT
TTAAAAAACAAACGCATCGACAACGAACAATACAGAGGCTTGATATGTCG
TTCGATGTTGCA
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Coding sequence (CDS) from alignment at KK037255.1:48969..50280-

>rna9647 ID=rna9647|Name=rna9647|organism=Nannochloropsis gaditana|type=CDS|length=981bp|location=Sequence derived from alignment at KK037255.1:48969..50280- (Nannochloropsis gaditana)
GGCTCCATTTTTAGCAACGCCGTGCTCTCCGGTACCTCCTTTGTCGGCGC
GGATTTAACGGACAGCGATTTCACCGACACGTACATGGGAGAATTCAACT
TGAGGGAGCTCTGCAAGAATCCGACGCTGAAGGGAACAAATCCGGTCACA
CAGGCCCCCACGAAGGAAAGTGCTGGCTGTAAATGAGCTGCAGATTTCGA
AGGCGCAGATTTCAGTAACGCGGTCGTCGATCGTGTCTCGTTCGACGGGT
CGAACCTGAAGATGGCAGAAGGTACTTTCAAGAAGGTCAATTTCAAGGAG
GCCGTTTTGAGCAAGGCCTACGCCAAGGGCTCCATTTTTAGCAACGCCGT
GCTCTCCGGTACCTCCTTTGTCGGCGCGGATTTAACGGACAGCGATTTCA
CCGACACGTACATGGGAGAATTCAACTTGAGGGAGCTCTGCAAGAATCCG
ACGCTGAAGGGAACAAATCCGGTCACACAGGCCCCCACGAAGGAAAGTGC
TGGCTGTAAATGAGCTGCAGATTTCGAAGGCGCAGATTTCAGTAACGCGG
TCGTCGATCGTGTCTCGTTCGACGGGTCGAACCTGAAGATGGCAGAAGGT
ACTTTCAAGAAGGTCAATTTCAAGGAGGCCGTTTTGAGCAAGGCCTACGC
CAAGGGCTCCATTTTTAGCAACGCCGTGCTCTCCGGTACCTCCTTTGTCG
GCGCGGATTTAACGGACAGCGATTTCACCGACACGTACATGGGAGAATTC
AACTTGAGGGAGCTCTGCAAGAATCCGACGCTGAAGGGAACAAATCCGGT
CACACAGGCCCCCACGAAGGAAAGTGCTGGCTGTAAATGAGCTGCAGATT
TCGAAGGCGCAGATTTCAGTAACGCGGTCGTCGATCGTGTCTCGTTCGAC
GGGTCGAACCTGAAGATGGCAGAAGGTACTTTCAAGAAGGTCAATTTCAA
GGAGGCCGTTTTGAGCAAGGCCTACGCCAAG
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Synonyms
Publications