EWM21058.1, cds9616 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|585101081|gb|EWM21058.1| (hypothetical protein Naga_101462g2 [Nannochloropsis gaditana]) HSP 1 Score: 218.394 bits (555), Expect = 5.081e-72 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 108 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK Sbjct: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 108
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|553182789|ref|XP_005853785.1| (hypothetical protein NGA_0469800 [Nannochloropsis gaditana CCMP526] >gi|422295276|gb|EKU22575.1| hypothetical protein NGA_0469800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 172.555 bits (436), Expect = 5.017e-54 Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0 Query: 20 YAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 108 +A +FEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK Sbjct: 2 WACPRNFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 90
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|298705858|emb|CBJ29003.1| (thylakoid lumenal protein [Ectocarpus siliculosus]) HSP 1 Score: 150.984 bits (380), Expect = 3.437e-44 Identity = 69/107 (64.49%), Postives = 91/107 (85.05%), Query Frame = 0 Query: 2 AEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 108 +E F K +FKE V+SKAYA+++++E ADF+NAVVDRVSFDGS++KG+IF NAVL+ TSF GAD+ ++DFT+ YMG+F+ + LCKNPTLKGTNPVT A T+ SAGC+ Sbjct: 91 SEANFSKGDFKEVVMSKAYARSSNWEEADFTNAVVDRVSFDGSSMKGAIFQNAVLTSTSFTGADVENADFTEAYMGDFDQKNLCKNPTLKGTNPVTNADTRASAGCR 197
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|551556044|ref|XP_005765169.1| (hypothetical protein EMIHUDRAFT_419713 [Emiliania huxleyi CCMP1516] >gi|485615060|gb|EOD12740.1| hypothetical protein EMIHUDRAFT_419713 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 141.739 bits (356), Expect = 1.684e-41 Identity = 67/107 (62.62%), Postives = 85/107 (79.44%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGC 107 M +G F NFKE+ LSKAYA A F+GADFSN VVDR F+G++ KG++FSNAVLSGT+F ADL+D+D+TD Y+G F+ ++LCKNPTL+G N T APT+ESAGC Sbjct: 16 MEKGDFSGTNFKESQLSKAYAPGAKFDGADFSNGVVDRAYFNGASFKGAVFSNAVLSGTTFENADLSDTDWTDAYIGMFDQKKLCKNPTLQGENAKTGAPTRESAGC 122
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|551605954|ref|XP_005784348.1| (hypothetical protein EMIHUDRAFT_442035 [Emiliania huxleyi CCMP1516] >gi|485637431|gb|EOD31919.1| hypothetical protein EMIHUDRAFT_442035 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 142.124 bits (357), Expect = 2.823e-41 Identity = 67/107 (62.62%), Postives = 85/107 (79.44%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGC 107 M +G F NFKE+ LSKAYA A F+GADFSN VVDR F+G++ KG++FSNAVLSGT+F ADL+D+D+TD Y+G F+ ++LCKNPTL+G N T APT+ESAGC Sbjct: 34 MEKGDFSGTNFKESQLSKAYAPGAKFDGADFSNGVVDRAYFNGASFKGAVFSNAVLSGTTFENADLSDTDWTDAYIGMFDQKKLCKNPTLQGENAKTGAPTRESAGC 140
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|551636040|ref|XP_005820848.1| (hypothetical protein GUITHDRAFT_155908 [Guillardia theta CCMP2712] >gi|428164857|gb|EKX33868.1| hypothetical protein GUITHDRAFT_155908 [Guillardia theta CCMP2712]) HSP 1 Score: 141.739 bits (356), Expect = 4.775e-40 Identity = 66/108 (61.11%), Postives = 88/108 (81.48%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 108 M +G F KV FK+AV+SK +A A F+GADFSNAV+DR ++ S+ KG+IF+NAVLSG+ F G+DLTDSDF+DTYMG+F+ +++CKNPTL+GTNPVT T+ SA C+ Sbjct: 129 MQKGDFSKVKFKDAVMSKVFADEATFDGADFSNAVMDRGTWRKSSFKGAIFANAVLSGSEFEGSDLTDSDFSDTYMGDFDNKKICKNPTLQGTNPVTGVDTRASASCR 236
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|88770664|gb|ABD51935.1| (chloroplast thylakoid 11 kDa protein, partial [Guillardia theta]) HSP 1 Score: 141.739 bits (356), Expect = 6.784e-40 Identity = 66/108 (61.11%), Postives = 88/108 (81.48%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 108 M +G F KV FK+AV+SK +A A F+GADFSNAV+DR ++ S+ KG+IF+NAVLSG+ F G+DLTDSDF+DTYMG+F+ +++CKNPTL+GTNPVT T+ SA C+ Sbjct: 134 MQKGDFSKVKFKDAVMSKVFADEATFDGADFSNAVMDRGTWRKSSFKGAIFANAVLSGSEFEGSDLTDSDFSDTYMGDFDNKKICKNPTLQGTNPVTGVDTRASASCR 241
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|551605933|ref|XP_005784338.1| (hypothetical protein EMIHUDRAFT_418190 [Emiliania huxleyi CCMP1516] >gi|485637421|gb|EOD31909.1| hypothetical protein EMIHUDRAFT_418190 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 135.576 bits (340), Expect = 1.377e-38 Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDG--------SNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGC 107 M +G F NFKE+ LSKAYA A F+GADFSN VVDR F+G S L G++FSNAVLSGT+F ADL+D+D+TD Y+G F+ ++LCKNPTL+G N T APT+ESAGC Sbjct: 34 MEKGDFSGTNFKESQLSKAYAPGAKFDGADFSNGVVDRAYFNGASFKARLGSRLAGAVFSNAVLSGTTFENADLSDTDWTDAYIGMFDQKKLCKNPTLQGENAKTGAPTRESAGC 148
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|397595313|gb|EJK56448.1| (hypothetical protein THAOC_23663 [Thalassiosira oceanica]) HSP 1 Score: 135.961 bits (341), Expect = 8.125e-38 Identity = 63/107 (58.88%), Postives = 84/107 (78.50%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGC 107 M++ K NF+EA SK Y + ++FE ADF+NA+VDR +F GS+LKG+IFSNAVL+ TSF GAD+ ++DFTD Y+G+F++R LCKNPTLKG NP+T A T+ SA C Sbjct: 128 MSKTDLSKANFREAQFSKGYLRDSNFEEADFTNAIVDRATFKGSSLKGTIFSNAVLTATSFEGADVENADFTDAYIGDFDIRNLCKNPTLKGENPLTGADTRLSANC 234
BLAST of EWM21058.1 vs. NCBI_GenBank
Match: gi|1072227622|gb|OEU12361.1| (hypothetical protein FRACYDRAFT_191563 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 132.88 bits (333), Expect = 7.713e-37 Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 0 Query: 1 MAEGTFKKVNFKEAVLSKAYAKAADFEGADFSNAVVDRVSFDGSNLKGSIFSNAVLSGTSFVGADLTDSDFTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGC 107 M + KVNF+EA SKAY ++FE ADFSNA+VDR SF GS+L+G++F NAVL+GTSF GAD+ ++DFT+ +G F+L+ LCKNPTLKG NP+T A T S GC Sbjct: 102 MTKTDVSKVNFQEAQFSKAYLHESNFEQADFSNAIVDRASFAGSSLRGAVFQNAVLTGTSFAGADVENADFTEAAIGSFDLKNLCKNPTLKGENPITGADTYLSVGC 208 The following BLAST results are available for this feature:
BLAST of EWM21058.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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