EWM21089.1, cds9584 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21089.1 vs. NCBI_GenBank
Match: gi|585101150|gb|EWM21089.1| (hypothetical protein Naga_101039g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 303.908 bits (777), Expect = 1.758e-104 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 Query: 1 MLLQRAPSILLAGGRKALTRPGRILVDNTPRRVTETVPTMAHTAALMARGCGARPSLFMPVLTNPVRTFSVGFGGLQYDTLTEMQEKACKRYGPKPFLGCRPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVGGREGGREGGREG 151 MLLQRAPSILLAGGRKALTRPGRILVDNTPRRVTETVPTMAHTAALMARGCGARPSLFMPVLTNPVRTFSVGFGGLQYDTLTEMQEKACKRYGPKPFLGCRPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVGGREGGREGGREG Sbjct: 1 MLLQRAPSILLAGGRKALTRPGRILVDNTPRRVTETVPTMAHTAALMARGCGARPSLFMPVLTNPVRTFSVGFGGLQYDTLTEMQEKACKRYGPKPFLGCRPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVGGREGGREGGREG 151
BLAST of EWM21089.1 vs. NCBI_GenBank
Match: gi|1210527370|dbj|GAX14005.1| (long-chain acyl-CoA synthetase [Fistulifera solaris]) HSP 1 Score: 65.855 bits (159), Expect = 1.072e-9 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0 Query: 76 LQYDTLTEMQEKACKRYGPKPFLGCRPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVGGREGGR 145 L +DTL EMQ +AC+ + PK G FEF++F +F +QV+ R LL + G+G DKVG R Sbjct: 53 LNFDTLHEMQVRACQVFAPKRLFGTYSETSNQFEFMSFGEFGQQVDHVRALLKDLGIGEHDKVGVISNNR 122
BLAST of EWM21089.1 vs. NCBI_GenBank
Match: gi|1210523750|dbj|GAX17432.1| (long-chain acyl-CoA synthetase [Fistulifera solaris]) HSP 1 Score: 65.0846 bits (157), Expect = 1.786e-9 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0 Query: 76 LQYDTLTEMQEKACKRYGPKPFLGCRPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVGGREGGR 145 L +DTL EMQ +AC+ + PK G FEF++F +F +QV+ R LL + G+G DKVG R Sbjct: 53 LNFDTLHEMQVRACQVFAPKRLFGTYSEASNQFEFMSFGEFGQQVDHVRALLKDLGIGEHDKVGVISNNR 122
BLAST of EWM21089.1 vs. NCBI_GenBank
Match: gi|553185155|ref|XP_005854208.1| (long-chain acyl-CoA ligase [Nannochloropsis gaditana CCMP526] >gi|422294847|gb|EKU22147.1| long-chain acyl-CoA ligase [Nannochloropsis gaditana CCMP526] >gi|585101848|gb|EWM21593.1| amp-dependent synthetase and ligase [Nannochloropsis gaditana]) HSP 1 Score: 60.4622 bits (145), Expect = 7.763e-8 Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0 Query: 78 YDTLTEMQEKACKRYGPKPFLGCRPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVGGREGGR 145 + TL EMQ+ + G K FLG +P +++IT+ F++ V +A+ +L EAG+G GDKV G R Sbjct: 50 FTTLVEMQQSVARTQGKKDFLGYKPCPSSKYKWITYQAFNDMVGKAKFVLREAGIGPGDKVAALSGNR 117 The following BLAST results are available for this feature:
BLAST of EWM21089.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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