rna9615, rna9615 (mRNA) Nannochloropsis gaditana

Overview
Namerna9615
Unique Namerna9615
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1048
Alignment locationKK037254.1:287175..288175 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101039g1.7426.mrna
Orig protein idgnl|cribi|Naga_101039g1.7426
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:287175..288175 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101039g1gene9333Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9615rna9615-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21089.1cds9584Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9615 ID=rna9615|Name=rna9615|organism=Nannochloropsis gaditana|type=mRNA|length=1048bp
TCGGAATCAGGTAACAATGTGGTGCAGGTTTTACGTGTCATGCGAGAGAT
GGGGGGTGCTGTTCGTCGAGTATGTTCCAATAGCGACTCAGAGCATACCA
TGCGGGCGAGCGTCGTCTGCACCACGCAAAAGCCCCTCGTTGCTTGCGTG
GCTTGCACCTGACCTTTTTTAGACAGTTTTTCTCCTCTTTGCATTGATTT
TATTGCGCGCACACCCGTGGCCCCTGCGAAAGCCCTCAGGATTGTGGCAA
ACTGAAAGTGACACCGTGGTCCTCCTTCATTTCCTCTACGACCTAGGCAC
GGACGCGGATAAAGAGTGCCACTTCAAAGCTCATGTATCAGTCTGTCCAA
AGCGAGACATTGGAATGGAGCGAGGTGGCCATGCGACGTAAGAGCCCAGG
CTGGCCTTTCTACCCGCTCGCCGCTCTTCTCTACGTGCTCGTGGACTTGC
CCTGGCTGCTCATCAATAGCGGGAATGTGCAAAACATGGTGGAGGACATC
CAAAAACAGCCCTTGGAGTTTCGGGTCTGGGCAGCTGTCCCTGTCTACGT
GGCTTTGGCGTACCTTGTGTCCCGCGCCAACTCCTCCTGGGAGGCCTTTG
GATTGGGGGTGGCATGCTATGCCGTCTACGACTGGACTAACATGAGCACT
CTCTCTTCGTACTGGTGGGGATTCGCTCTGGCTGATTCCGTTTGGGGTGG
TGTCTTGACGTGCATCGTTTTCATTATTTTAACTCATCCACGCATTTCAC
CGGTGTGGGCGGCGCAAAGACAGTAAAATAGAGGAGTAAGGCATTCCTGA
AGGAGGTTCCTCAGTTGGTATCAATGGATAATAATCCTACCAAAAAATAT
CCATGCAAACACTCTTTTGAGGTTTTAAGGAGCATTCCAAGGCAACAAAC
ATGATTTTGTTCGATGCCACACAAAATGCTTTGCGTTGCTACCTCCATGA
TCTCGTCTCTTGAAATGTGACACGACGACAGGTTCGAACTGCATCATTAC
ACGACTTTTAAAACCACCGCAATGACTTTTAAACACTTGCAATAGTCC
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protein sequence of rna9615

>rna9615-protein ID=rna9615-protein|Name=rna9615|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MLLQRAPSILLAGGRKALTRPGRILVDNTPRRVTETVPTMAHTAALMARG
CGARPSLFMPVLTNPVRTFSVGFGGLQYDTLTEMQEKACKRYGPKPFLGC
RPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVGGREGGREGGRE
G
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mRNA from alignment at KK037254.1:287175..288175+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9615 ID=rna9615|Name=rna9615|organism=Nannochloropsis gaditana|type=mRNA|length=1001bp|location=Sequence derived from alignment at KK037254.1:287175..288175+ (Nannochloropsis gaditana)
CGTCCGGTGTTTGTGGCTTTGGTCCTGGAAATGGCTCTGGgacgcccccc
ctcctccttgttctcACTCGCTTAAGAAGCACGCTTGCCCTTCAATATCA
ACCTGGCTCCAACCGCAATCtgcgcccctccccaccctcatACTTCACGC
ACATCGCACAGGCGACAGCGCCGCACCGAGGACGTCGAGTGAGACGTAGA
AGCGAGGCGAGGTGTCCACTACTTTTGTCCTTACGTGGAACAGTCCTGTC
AACGAGCATTTCACTTCCAGCTCTCCATTATCCTTCACTCCCCCATGCTC
CTCCAACGcgccccttccatcctccttgcgGGCGGCCGCAAAGCTTTAAC
ACGCCCAGGACGTATCCTTGTAGACAATACTCCACGTCGTGTAACTGAGG
TGCGACTCCATCCACGGCTTCACTGCGTTTCCTCTTGccttccccgctct
ccctctcaccaccAGTCTTCTTCGCATGTGTCTCCACAGACTGTTCCAAC
CATGGCACACACTGCGGCGCTCATGGCACGCGGGTGTGGAGCCAGGCCGT
CTCTCTTCATGCCCGTCCTGACCAATCCGGTTCGCACCTTCTCCGTGGGC
TTTGGGGGCCTCCAGTACGACACTCTCACGGAGATGCAGGAGAAGTACgc
gcggggggcgaggggggcgaatTTCGAGGGcgtgagaggaaggaagcacg
cgggttttccctctctgtctccttttGCTTTGAAAACTCGCATGGCTtgt
ttctccccctctgccttgTCGggtccctccctgtctctgACGCTCGGATC
CCTCCCAGGGCGTGCAAACGCTACGGCCCCAAACCCTTCCTGGGATGCCG
ACCTCCCAACGGCGGGCCCTTCGAGTTCATCACCTTCAGCGACTTTGACG
AGCAGGTCAACAGGGCGCGAGTCCTCTTACacgaggcgggcgtggggagg
ggcgacaaggtgggagggagggagggagggagggagggagggagggaggg
a
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Coding sequence (CDS) from alignment at KK037254.1:287175..288175+

>rna9615 ID=rna9615|Name=rna9615|organism=Nannochloropsis gaditana|type=CDS|length=1359bp|location=Sequence derived from alignment at KK037254.1:287175..288175+ (Nannochloropsis gaditana)
ATGCTCCTCCAACGcgccccttccatcctccttgcgGGCGGCCGCAAAGC
TTTAACACGCCCAGGACGTATCCTTGTAGACAATACTCCACGTCGTGTAA
CTGAGACTGTTCCAACCATGGCACACACTGCGGCGCTCATGGCACGCGGG
TGTGGAGCCAGGCCGTCTCTCTTCATGCCCGTCCTGACCAATCCGGTTCG
CACCTTCTCCGTGGGCTTTGGGGGCCTCCAGTACGACACTCTCACGGAGA
TGCAGGAGAAGGCGTGCAAACGCTACGGCCCCAAACCCTTCCTGGGATGC
CGACCTCCCAACGGCGGGCCCTTCGAGTTCATCACCTTCAGCGACTTTGA
CGAGCAGGTCAACAGGGCGCGAGTCCTCTTACacgaggcgggcgtgggga
ggggcgacaaggtgggagggagggagggagggagggagggagggagggag
ggaATGCTCCTCCAACGcgccccttccatcctccttgcgGGCGGCCGCAA
AGCTTTAACACGCCCAGGACGTATCCTTGTAGACAATACTCCACGTCGTG
TAACTGAGACTGTTCCAACCATGGCACACACTGCGGCGCTCATGGCACGC
GGGTGTGGAGCCAGGCCGTCTCTCTTCATGCCCGTCCTGACCAATCCGGT
TCGCACCTTCTCCGTGGGCTTTGGGGGCCTCCAGTACGACACTCTCACGG
AGATGCAGGAGAAGGCGTGCAAACGCTACGGCCCCAAACCCTTCCTGGGA
TGCCGACCTCCCAACGGCGGGCCCTTCGAGTTCATCACCTTCAGCGACTT
TGACGAGCAGGTCAACAGGGCGCGAGTCCTCTTACacgaggcgggcgtgg
ggaggggcgacaaggtgggagggagggagggagggagggagggagggagg
gagggaATGCTCCTCCAACGcgccccttccatcctccttgcgGGCGGCCG
CAAAGCTTTAACACGCCCAGGACGTATCCTTGTAGACAATACTCCACGTC
GTGTAACTGAGACTGTTCCAACCATGGCACACACTGCGGCGCTCATGGCA
CGCGGGTGTGGAGCCAGGCCGTCTCTCTTCATGCCCGTCCTGACCAATCC
GGTTCGCACCTTCTCCGTGGGCTTTGGGGGCCTCCAGTACGACACTCTCA
CGGAGATGCAGGAGAAGGCGTGCAAACGCTACGGCCCCAAACCCTTCCTG
GGATGCCGACCTCCCAACGGCGGGCCCTTCGAGTTCATCACCTTCAGCGA
CTTTGACGAGCAGGTCAACAGGGCGCGAGTCCTCTTACacgaggcgggcg
tggggaggggcgacaaggtgggagggagggagggagggagggagggaggg
agggaggga
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Synonyms
Publications