EWM21131.1, cds9575 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21131.1 vs. NCBI_GenBank
Match: gi|585101198|gb|EWM21131.1| (protein of unknown function DUF2059 [Nannochloropsis gaditana]) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0 Query: 1 MVIPSKRRRIPYLFLFLFFSIVLLLAWAPRSMAAKAKNAKTKDTIKQKKGQKEQKSPQMKKQGETATPKRQQKQQQRPREKLEDLSLMDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAILESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSGPGLQGQGQGPQEWQDQQALYSSKGTTVYMNEGKPKGRQKEQGKKRAAARAGPASANGGDGEL 262 MVIPSKRRRIPYLFLFLFFSIVLLLAWAPRSMAAKAKNAKTKDTIKQKKGQKEQKSPQMKKQGETATPKRQQKQQQRPREKLEDLSLMDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAILESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSGPGLQGQGQGPQEWQDQQALYSSKGTTVYMNEGKPKGRQKEQGKKRAAARAGPASANGGDGEL Sbjct: 1 MVIPSKRRRIPYLFLFLFFSIVLLLAWAPRSMAAKAKNAKTKDTIKQKKGQKEQKSPQMKKQGETATPKRQQKQQQRPREKLEDLSLMDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAILESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSGPGLQGQGQGPQEWQDQQALYSSKGTTVYMNEGKPKGRQKEQGKKRAAARAGPASANGGDGEL 262
BLAST of EWM21131.1 vs. NCBI_GenBank
Match: gi|553181158|ref|XP_005853520.1| (hypothetical protein NGA_0269602 [Nannochloropsis gaditana CCMP526] >gi|422295538|gb|EKU22837.1| hypothetical protein NGA_0269602 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 528.865 bits (1361), Expect = 0.000e+0 Identity = 261/262 (99.62%), Postives = 261/262 (99.62%), Query Frame = 0 Query: 1 MVIPSKRRRIPYLFLFLFFSIVLLLAWAPRSMAAKAKNAKTKDTIKQKKGQKEQKSPQMKKQGETATPKRQQKQQQRPREKLEDLSLMDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAILESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSGPGLQGQGQGPQEWQDQQALYSSKGTTVYMNEGKPKGRQKEQGKKRAAARAGPASANGGDGEL 262 MVI SKRRRIPYLFLFLFFSIVLLLAWAPRSMAAKAKNAKTKDTIKQKKGQKEQKSPQMKKQGETATPKRQQKQQQRPREKLEDLSLMDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAILESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSGPGLQGQGQGPQEWQDQQALYSSKGTTVYMNEGKPKGRQKEQGKKRAAARAGPASANGGDGEL Sbjct: 1 MVISSKRRRIPYLFLFLFFSIVLLLAWAPRSMAAKAKNAKTKDTIKQKKGQKEQKSPQMKKQGETATPKRQQKQQQRPREKLEDLSLMDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAILESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSGPGLQGQGQGPQEWQDQQALYSSKGTTVYMNEGKPKGRQKEQGKKRAAARAGPASANGGDGEL 262
BLAST of EWM21131.1 vs. NCBI_GenBank
Match: gi|501124751|ref|WP_012173848.1| (DUF2059 domain-containing protein [Desulfococcus oleovorans] >gi|158509262|gb|ABW66229.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3]) HSP 1 Score: 62.003 bits (149), Expect = 2.060e-8 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 88 MDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAIL--ESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEA 192 ++DT NRQ AAR +K TP ++++ + Q+ + E EE KA+L D A T++M+ + F+A+EL +AD+ S VGK K Y+ + PA++A Sbjct: 19 LEDTPSNRQKEAARYLKTTPPADMMKDMAQKVSMNLPPENREEF-KALLTKHLDLEAFTKIMKDSMEKHFTADELKALADFYGSPVGKSAMNKFGDYMGDIMPAIQA 124
BLAST of EWM21131.1 vs. NCBI_GenBank
Match: gi|1086593019|emb|SDD78939.1| (hypothetical protein SAMN05421720_101545 [Rhodospira trueperi]) HSP 1 Score: 57.3806 bits (137), Expect = 9.338e-7 Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = 0 Query: 88 MDDTKENRQYHAARVMKGTPLIEILEGLVQEAARLKGSEAAEE-IRKAILESDTRALTQVMEKAYAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSG 200 ++DT NR A R + P ++LE V AR+ E + I A+L D L + A TFSA+EL +AD+ S VG+ V RKM +Y +V P + + +G Sbjct: 23 LEDTAANRWAQAVRYERAVPTDDVLETSVVRVARMLPPEHRQPFIDYAVLRIDRDGLRDSVLTALTETFSADELRAMADFFGSPVGQSVARKMGRYTERVMPLVMTVVRATATG 136 The following BLAST results are available for this feature:
BLAST of EWM21131.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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