rna9606, rna9606 (mRNA) Nannochloropsis gaditana

Overview
Namerna9606
Unique Namerna9606
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1094
Alignment locationKK037254.1:270886..272237 -

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Properties
Property NameValue
Productprotein of unknown function DUF2059
Orig transcript idgnl|cribi|Naga_100041g48.3701.mrna
Orig protein idgnl|cribi|Naga_100041g48.3701
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:270886..272237 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100041g48gene9324Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9606rna9606-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21131.1cds9575Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9606 ID=rna9606|Name=rna9606|organism=Nannochloropsis gaditana|type=mRNA|length=1094bp
ATGTGTTACCGTATACACGTAAAAAGGGTGGCAGCACAAGAGAGATCCAG
CCACCACGCCGGCTTGGTCATCGCTGCTCGCCAGGACAGCCACGCTACTC
AATTTTACTTGCCGTCGAACACCAGTTTGCATCCATCCACTCCCTTTCGG
CACAGGCTGGCAGTCCATACGAGCCCTGCGATGAGGGCATCCTCGTCGGG
ACCCCCTGAGGCCTCCACCTACCACGAAACCAAGGAGATTAACGGCGTCC
TCACAGATGTTGCCATTTTCAATTTCAGTGACCGAATATTCCTTACGATC
TCGCAAAATGCTCGGTTTGGGACCCTGATATCAGCCAAAGCTGACGACAG
CGTGGCTCGTCCAGGCGCTGCTCCCTCCTTCGATGTGAGTGTACTCCTCG
GCCGACGCGATGACCCCCTACTCCTCATCTACGCGCGCCAGCTTGTAGAG
ACAGTGAGCAGATCCTCCTCCCGCCCGCTCCTGCTCTCAATATCCCTGAG
GGAACGGGATCCAAGCACATTCGAGCAGGTAGCGGCCTGGGTTAGGCCCT
TACTCTGATATCGGACGATCAGAGCCCGGCTTCCAGCGAGCAACGATGTA
CAGAAAGGGGGGCAAGTAAAGACGGAAAAGCAAGAAGTGACTCGGAACCA
GGGCGTCTTTCCCGTTTGTTCTCAGTTTTGGCCCCCGCATGATCTATCAA
CCCGCTGTCTGCGGAACATTTGCTCCCTCAAAACCGACCCGACACAACGA
GAACCCGCACAATCTGCCACCCTGGAGGACGTTCTCCACATCGCCTAGAG
TTCCCCATCGCCGCCGTTGGCACTGGCGGGGCCCGCGCGGGCCGCTGCCC
TTTTCTTCCCCTGCTCCTTTTGCCTGCCCTTGGGCTTTCCCTCGTTCATG
TAGACAGTGGTGCCCTTGGAGGAGTAGAGGGCCTGCTGGTCCTGCCACTC
CTGTGGCCCCTGTCCCTGGCCCTGCAGCCCCGGGCCCGAGAACACCTCCT
TGGTGAAGGCCTCCATGGCGGGCGTGACCTGGTTGGTGAGTGCTTTCGCC
CATGAGAAGCGGCCGCTCCTGCTTACCCTGCCAGAGGTGCCACA
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protein sequence of rna9606

>rna9606-protein ID=rna9606-protein|Name=rna9606|organism=Nannochloropsis gaditana|type=polypeptide|length=262bp
MVIPSKRRRIPYLFLFLFFSIVLLLAWAPRSMAAKAKNAKTKDTIKQKKG
QKEQKSPQMKKQGETATPKRQQKQQQRPREKLEDLSLMDDTKENRQYHAA
RVMKGTPLIEILEGLVQEAARLKGSEAAEEIRKAILESDTRALTQVMEKA
YAGTFSAEELAFIADYSNSEVGKRVQRKMSQYVAKVTPAMEAFTKEVFSG
PGLQGQGQGPQEWQDQQALYSSKGTTVYMNEGKPKGRQKEQGKKRAAARA
GPASANGGDGEL
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mRNA from alignment at KK037254.1:270886..272237-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9606 ID=rna9606|Name=rna9606|organism=Nannochloropsis gaditana|type=mRNA|length=1352bp|location=Sequence derived from alignment at KK037254.1:270886..272237- (Nannochloropsis gaditana)
GCCATGGGCCTCAGACTTGCTACACGGTGGCTTCCACATTCACGTTGAGA
CCGCGTCATTGCTCACTCTGACAGATTCTAGGCACAGTCTGCCACATTAG
CCCTGTCCATCGACAATGGTCATTCCTTCGAAGCGTCGACGAATCCCCTA
TCTCTTCCTCTTCCTGTTCTTTTCCATCGTCCTACTGCTTGCCTGGGCTC
CTCGAAGTATGGCGGCGAAAGCTAAGAATGCAAAGACTAAGGACACAATA
AAGCAAAAAAAAGGACAAAAGGAGCAGAAGTCTCCCCAAATGAAGAAGCA
GGGTGAGACCGCTACGCCAAAAAGGCAGCAAAAACAACAGCAAAGGCCGA
GAGAGAAATTGGAGGACCTCTCTCTCATGGATGACACAAAAGAAAACCGG
CAGTACCATGCCGCGAGGGTGATGAAGGGGACACCTTTGATCGAGATCCT
AGAAGGGCTCGTGCAAGAGGCAGCGCGCTTGAAAGGCAGCGAGGCCGCCG
AGGTAAGAATTAGGGATGAGGTTCGGGATGGGGCGCATTTCATGTCAAAG
AAAATTTTGACGCCAATTAAAACGGTGCGATCTCTGGCTTCAGCCAGCAT
TCAAAATGCGATTGCCATATCCAAGTTACTGATGGCCGTCAAACACGCGA
TTGCAGGAAATTCGGAAGGCCATCCTCGAGTCGGACACTCGGGCCCTGAC
CCAGGTGATGGAGAAGGCGTACGCCGGGACCTTCTCGGCCGAAGAGCTCG
CTTTCATCGCCGACTACAGCAACTCCGAGGTCGGGAAACGTGTGCAGCGG
AAGATGAGCCAGTACGTGGCCAAGGTAGGTGCCGGGGCGGGTAGGAAACG
AGCGAGGCCGGGGGAGGAACCTGGTAGCATCGTGCGGGGGCTTTGGCAGG
ACCGTGTGGCACCTCTGGCAGGGTAAGCAGGAGCGGCCGCTTCTCATGGG
CGAAAGCACTCACCAACCAGGTCACGCCCGCCATGGAGGCCTTCACCAAG
GAGGTGTTCTCGGGCCCGGGGCTGCAGGGCCAGGGACAGGGGCCACAGGA
GTGGCAGGACCAGCAGGCCCTCTACTCCTCCAAGGGCACCACTGTCTACA
TGAACGAGGGAAAGCCCAAGGGCAGGCAAAAGGAGCAGGGGAAGAAAAGG
GCAGCGGCCCGCGCGGGCCCCGCCAGTGCCAACGGCGGCGATGGGGAACT
CTAGGCGATGTGGAGAACGTCCTCCAGGGTGGCAGATTGTGCGGGTTCTC
GTTGTGTCGGGTCGGTTTTGAGGGAGCAAATGTTCCGCAGACAGCGGGTT
GATAGATCATGCGGGGGCCAAAACTGAGAACAAACGGGAAAGACGCCCTG
GT
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Coding sequence (CDS) from alignment at KK037254.1:270886..272237-

>rna9606 ID=rna9606|Name=rna9606|organism=Nannochloropsis gaditana|type=CDS|length=2367bp|location=Sequence derived from alignment at KK037254.1:270886..272237- (Nannochloropsis gaditana)
GTCACGCCCGCCATGGAGGCCTTCACCAAGGAGGTGTTCTCGGGCCCGGG
GCTGCAGGGCCAGGGACAGGGGCCACAGGAGTGGCAGGACCAGCAGGCCC
TCTACTCCTCCAAGGGCACCACTGTCTACATGAACGAGGGAAAGCCCAAG
GGCAGGCAAAAGGAGCAGGGGAAGAAAAGGGCAGCGGCCCGCGCGGGCCC
CGCCAGTGCCAACGGCGGCGATGGGGAACTCTAGGAAATTCGGAAGGCCA
TCCTCGAGTCGGACACTCGGGCCCTGACCCAGGTGATGGAGAAGGCGTAC
GCCGGGACCTTCTCGGCCGAAGAGCTCGCTTTCATCGCCGACTACAGCAA
CTCCGAGGTCGGGAAACGTGTGCAGCGGAAGATGAGCCAGTACGTGGCCA
AGATGGTCATTCCTTCGAAGCGTCGACGAATCCCCTATCTCTTCCTCTTC
CTGTTCTTTTCCATCGTCCTACTGCTTGCCTGGGCTCCTCGAAGTATGGC
GGCGAAAGCTAAGAATGCAAAGACTAAGGACACAATAAAGCAAAAAAAAG
GACAAAAGGAGCAGAAGTCTCCCCAAATGAAGAAGCAGGGTGAGACCGCT
ACGCCAAAAAGGCAGCAAAAACAACAGCAAAGGCCGAGAGAGAAATTGGA
GGACCTCTCTCTCATGGATGACACAAAAGAAAACCGGCAGTACCATGCCG
CGAGGGTGATGAAGGGGACACCTTTGATCGAGATCCTAGAAGGGCTCGTG
CAAGAGGCAGCGCGCTTGAAAGGCAGCGAGGCCGCCGAGGTCACGCCCGC
CATGGAGGCCTTCACCAAGGAGGTGTTCTCGGGCCCGGGGCTGCAGGGCC
AGGGACAGGGGCCACAGGAGTGGCAGGACCAGCAGGCCCTCTACTCCTCC
AAGGGCACCACTGTCTACATGAACGAGGGAAAGCCCAAGGGCAGGCAAAA
GGAGCAGGGGAAGAAAAGGGCAGCGGCCCGCGCGGGCCCCGCCAGTGCCA
ACGGCGGCGATGGGGAACTCTAGGAAATTCGGAAGGCCATCCTCGAGTCG
GACACTCGGGCCCTGACCCAGGTGATGGAGAAGGCGTACGCCGGGACCTT
CTCGGCCGAAGAGCTCGCTTTCATCGCCGACTACAGCAACTCCGAGGTCG
GGAAACGTGTGCAGCGGAAGATGAGCCAGTACGTGGCCAAGATGGTCATT
CCTTCGAAGCGTCGACGAATCCCCTATCTCTTCCTCTTCCTGTTCTTTTC
CATCGTCCTACTGCTTGCCTGGGCTCCTCGAAGTATGGCGGCGAAAGCTA
AGAATGCAAAGACTAAGGACACAATAAAGCAAAAAAAAGGACAAAAGGAG
CAGAAGTCTCCCCAAATGAAGAAGCAGGGTGAGACCGCTACGCCAAAAAG
GCAGCAAAAACAACAGCAAAGGCCGAGAGAGAAATTGGAGGACCTCTCTC
TCATGGATGACACAAAAGAAAACCGGCAGTACCATGCCGCGAGGGTGATG
AAGGGGACACCTTTGATCGAGATCCTAGAAGGGCTCGTGCAAGAGGCAGC
GCGCTTGAAAGGCAGCGAGGCCGCCGAGGTCACGCCCGCCATGGAGGCCT
TCACCAAGGAGGTGTTCTCGGGCCCGGGGCTGCAGGGCCAGGGACAGGGG
CCACAGGAGTGGCAGGACCAGCAGGCCCTCTACTCCTCCAAGGGCACCAC
TGTCTACATGAACGAGGGAAAGCCCAAGGGCAGGCAAAAGGAGCAGGGGA
AGAAAAGGGCAGCGGCCCGCGCGGGCCCCGCCAGTGCCAACGGCGGCGAT
GGGGAACTCTAGGAAATTCGGAAGGCCATCCTCGAGTCGGACACTCGGGC
CCTGACCCAGGTGATGGAGAAGGCGTACGCCGGGACCTTCTCGGCCGAAG
AGCTCGCTTTCATCGCCGACTACAGCAACTCCGAGGTCGGGAAACGTGTG
CAGCGGAAGATGAGCCAGTACGTGGCCAAGATGGTCATTCCTTCGAAGCG
TCGACGAATCCCCTATCTCTTCCTCTTCCTGTTCTTTTCCATCGTCCTAC
TGCTTGCCTGGGCTCCTCGAAGTATGGCGGCGAAAGCTAAGAATGCAAAG
ACTAAGGACACAATAAAGCAAAAAAAAGGACAAAAGGAGCAGAAGTCTCC
CCAAATGAAGAAGCAGGGTGAGACCGCTACGCCAAAAAGGCAGCAAAAAC
AACAGCAAAGGCCGAGAGAGAAATTGGAGGACCTCTCTCTCATGGATGAC
ACAAAAGAAAACCGGCAGTACCATGCCGCGAGGGTGATGAAGGGGACACC
TTTGATCGAGATCCTAGAAGGGCTCGTGCAAGAGGCAGCGCGCTTGAAAG
GCAGCGAGGCCGCCGAG
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Synonyms
Publications