EWM21123.1, cds9556 (CDS) Nannochloropsis gaditana

Overview
NameEWM21123.1
Unique Namecds9556
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:236786..237071 -
Alignment locationKK037254.1:236442..236586 -
Alignment locationKK037254.1:235935..236239 -
Alignment locationKK037254.1:235255..235859 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21123.1
ProductSignal transduction histidine kinase, core
Orig transcript idgnl|cribi|Naga_100041g27.3693.mrna
GenePDK1
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:236786..237071 -
KK037254.1supercontigKK037254.1:236442..236586 -
KK037254.1supercontigKK037254.1:235935..236239 -
KK037254.1supercontigKK037254.1:235255..235859 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0065009regulation of molecular function
GO:0006464cellular protein modification process
GO:0016310phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0016772transferase activity, transferring phosphorus-containing groups
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR005467Sig_transdc_His_kinase_core
IPR018955BCDHK/PDK_N
IPR003594HATPase_C
IPR004358Sig_transdc_His_kin-like_C
Homology
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|585101190|gb|EWM21123.1| (Signal transduction histidine kinase, core [Nannochloropsis gaditana])

HSP 1 Score: 923.694 bits (2386), Expect = 0.000e+0
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query:    1 MMAGGVALLSFAVRQAVRRPKCGSGGVLRPLSMLSNSHRQVSQPHGSARPSSSLGSLNYAHVAPDPLADPGVFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            MMAGGVALLSFAVRQAVRRPKCGSGGVLRPLSMLSNSHRQVSQPHGSARPSSSLGSLNYAHVAPDPLADPGVFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP
Sbjct:    1 MMAGGVALLSFAVRQAVRRPKCGSGGVLRPLSMLSNSHRQVSQPHGSARPSSSLGSLNYAHVAPDPLADPGVFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|298708245|emb|CBJ48308.1| (pyruvate dehydrogenase kinase [Ectocarpus siliculosus])

HSP 1 Score: 492.656 bits (1267), Expect = 6.200e-169
Identity = 253/412 (61.41%), Postives = 309/412 (75.00%), Query Frame = 0
Query:   51 SSSLGSLNYAHVAPDPLADPG--VFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKY-FGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSS----------EFYDLE-VHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMP--PIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            SS  G ++Y+ +    +A PG  + DDI   + ++QTGVSLKTL+DTGRG LL  +     +++ +  Q+ML QVA FLHRELPIR AHRVRDL+++P M    S+Q V+ WYV S+ EIR  P P TV +E  FA LLK IY+RHAPVLLTMARG +ELR+ +    +          +FYD E  H FLD FY+SRIGIR+LIG YL L+E     +IG+ C  TSP  +A  AI+DAKF+CTRQ+GDAP+VTLHGRLDLTF+YV  H+HYI+LEL+KNSMRAT +FHG D+M   PIR+VIADGE NEDVVIKV+DEGGGI RS+++RIWSYLFTTADP +Q GF++L    SD    SPLAGLGYGLPISR+YARYFGGDLSI+SMEGYGTDAFVHLSRLG+H EPLP
Sbjct:   78 SSRGGDVDYSSL----MAGPGTALHDDIMESAARKQTGVSLKTLIDTGRGDLLSGEMGLTGQDSLSTKQKMLIQVASFLHRELPIRLAHRVRDLESVPDMLAQKSVQQVREWYVISYEEIRKFPRPVTVDEEVRFAELLKGIYQRHAPVLLTMARGVWELRESFGPKDASRRGAKNRFGDFYDFERTHTFLDGFYMSRIGIRILIGHYLALQEAGADSWIGMVCQETSPAAIAEAAIEDAKFVCTRQYGDAPDVTLHGRLDLTFSYVPSHLHYIMLELIKNSMRATVDFHGLDEMDNNPIRVVIADGEGNEDVVIKVADEGGGIRRSYMTRIWSYLFTTADPAVQEGFINLGEVESDHAKESPLAGLGYGLPISRSYARYFGGDLSIVSMEGYGTDAFVHLSRLGHHSEPLP 485          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|1210516481|dbj|GAX24648.1| (pyruvate dehydrogenase kinase 2/3/4 [Fistulifera solaris])

HSP 1 Score: 444.506 bits (1142), Expect = 5.864e-151
Identity = 221/370 (59.73%), Postives = 277/370 (74.86%), Query Frame = 0
Query:   82 KRQTGVSLKTLLDTGRGHLLQKKYFGKE-ENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTP-NTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQ--KYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            + QT VSL+ L+ TGRG  L K +  +E E   A+Q +L QVA FL RELPIR AHR++DL+A+P++R+M S+  V+  Y+ SF EI +      T  +EA FA++L+NIYERH+ VL+ MARGAYE R+  +   G     + E+H+FLD FYL RIGIR+LIGQYL LR+PP  +Y+G+ C +TSP ++   AIDD+ FMCTR++GDAP+V + G L+LTF Y   H+HYI+LELLKNSMRAT E+HG D D P I++VIADG +NEDVVIKVSDEGGGIPRS+  +IWSYLFTTADP +Q G V       D    +PLAGLGYGLPISR+YARYFGGDLSIMSMEGYGTDAFV+L+RLGN  EPLP
Sbjct:   57 QSQTSVSLQALMRTGRGEYLHKTFAEEEREKHAATQLVLIQVASFLRRELPIRLAHRIQDLEAVPILRDMESVIAVRDLYIKSFLEIMSFDNKIQTAEQEAAFALMLENIYERHSKVLVQMARGAYEFRKAVREEKGPGLELEEEIHHFLDRFYLCRIGIRVLIGQYLALRQPPVENYVGIICSKTSPYEIVKRAIDDSAFMCTRKYGDAPDVIISGSLNLTFPYAPTHLHYIMLELLKNSMRATVEWHGIDSDFPDIKVVIADGAENEDVVIKVSDEGGGIPRSNTKKIWSYLFTTADPSVQEGMVGTPQ-GIDHGRDAPLAGLGYGLPISRSYARYFGGDLSIMSMEGYGTDAFVYLARLGNTKEPLP 425          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|1210513082|dbj|GAX27898.1| (pyruvate dehydrogenase kinase 2/3/4 [Fistulifera solaris])

HSP 1 Score: 443.351 bits (1139), Expect = 1.862e-150
Identity = 220/368 (59.78%), Postives = 275/368 (74.73%), Query Frame = 0
Query:   84 QTGVSLKTLLDTGRGHLLQKKYFGKE-ENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTP-NTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQ--KYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            QT VSL+ L+ TGRG  L K +  +E E   A+Q +L QVA FL RELPIR AHR++DL+ +P++R+M S+  V+  Y+ SF EI +      T  +EA FA++L+NIYERH+ VL+ MARGAYE R+  +   G     + E+H+FLD FYL RIGIR+LIGQYL LR+PP  +Y+G+ C +TSP ++   AIDD+ FMCTR++GDAP+V + G L+LTF Y   H+HYI+LELLKNSMRAT E+HG D D P I++VIADG +NEDVVIKVSDEGGGIPRS+  +IWSYLFTTADP +Q G V       D    +PLAGLGYGLPISR+YARYFGGDLSIMSMEGYGTDAFV+L+RLGN  EPLP
Sbjct:   59 QTSVSLQALMRTGRGEFLHKTFAEEEREKHAATQLVLIQVASFLRRELPIRLAHRIQDLEGVPILRDMESVLAVRDLYIKSFLEIMSFDNKIQTAEQEAAFALMLENIYERHSKVLVQMARGAYEFRKAVREEKGPGLELEEEIHHFLDRFYLCRIGIRVLIGQYLALRQPPVENYVGIICSKTSPYEIVKRAIDDSAFMCTRKYGDAPDVIISGSLNLTFPYAPTHLHYIMLELLKNSMRATVEWHGIDGDFPDIKVVIADGAENEDVVIKVSDEGGGIPRSNTKKIWSYLFTTADPSVQEGMVGTPQ-GIDHGRDAPLAGLGYGLPISRSYARYFGGDLSIMSMEGYGTDAFVYLARLGNTKEPLP 425          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|224010273|ref|XP_002294094.1| (pyruvate dehydrogenase kinase, partial [Thalassiosira pseudonana CCMP1335] >gi|220970111|gb|EED88449.1| pyruvate dehydrogenase kinase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 429.869 bits (1104), Expect = 1.646e-146
Identity = 216/342 (63.16%), Postives = 263/342 (76.90%), Query Frame = 0
Query:  112 TTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEI----RNAPTPNTVAK-EADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLE-VHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            + A+  +L QVA FL RELPIR AHR++DL  +P++++M S+Q VK  Y TSF EI    ++ PT     + E  FA +L+NIYERH+ VL+ MARGA+ELR+  V    EF  +E  H FLD FY+SRIGIR+LIGQYL LR+PP  +Y+G+ C +TSP ++   AIDDA FMCTR++GDAPEV + GRLD+TF YV  H+HYI+LELLKNSMRAT E+HG D D PPI++VIADG+DNEDV+IKVSDEGGGIPRS++ RIWSYLFTTADPEIQ G V  +    D    SPLAGLGYGLPISR+Y RYFGGDLSIMSMEGYGTD FV+L+RLGN  EPLP
Sbjct:    1 SEATPLVLLQVASFLRRELPIRLAHRIQDLSRVPLLQDMKSVQQVKELYTTSFLEIMSVDKHPPTREGQEEWEEHFAKILENIYERHSSVLVQMARGAFELRRDAV----EFELMESTHAFLDRFYISRIGIRVLIGQYLSLRQPPVENYVGIICSKTSPYEIVKRAIDDAAFMCTRKYGDAPEVIITGRLDMTFPYVPTHLHYIMLELLKNSMRATVEYHGVDADYPPIKVVIADGKDNEDVIIKVSDEGGGIPRSNMKRIWSYLFTTADPEIQEGMVAFNENV-DHSIDSPLAGLGYGLPISRSYTRYFGGDLSIMSMEGYGTDCFVYLTRLGNTREPLP 337          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|219119999|ref|XP_002180748.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407464|gb|EEC47400.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 421.009 bits (1081), Expect = 1.095e-142
Identity = 209/345 (60.58%), Postives = 261/345 (75.65%), Query Frame = 0
Query:  112 TTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRN-APTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYE----LRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD--DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHP---ASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            + +++ +L QVA FL RELPIR AHR+RDL+ IP++++M SIQLV+  YV SF E+ +      +  +E  FA L++NIY+RH+ VL+ MA+GAYE    +RQ+  A   E  + E H FLD FYL RIGIR+LIGQYL LR+PP  +Y+G+ C  TSP ++   AIDDA FMCTR++GDAPEV + GRLDLTF YV  H+HYI+LEL+KNSMRAT E+HG D  + PPI+++IADG DNEDVVIKVSDEGGGIPRS++ +IWSYLFTTADP IQ G V  +       D    SPLAGLGYGLPISR+Y RYFGGDLSIMSMEG+GTDAFV+L+RLGN  EP+P
Sbjct:   13 SVSTELVLIQVAGFLRRELPIRLAHRIRDLEGIPLLKDMASIQLVRDLYVKSFLELLSFDKLIQSAEQEEGFAALIENIYDRHSKVLVQMAQGAYEFRSAVRQEKGADGFELQE-ETHRFLDRFYLDRIGIRVLIGQYLALRQPPVENYVGIICSHTSPYEIVKRAIDDAAFMCTRKYGDAPEVIMSGRLDLTFPYVPTHLHYIMLELIKNSMRATVEWHGIDSPEFPPIKVIIADGADNEDVVIKVSDEGGGIPRSNMGKIWSYLFTTADPAIQAGMVGTAGAKGQGQDHGIDSPLAGLGYGLPISRSYCRYFGGDLSIMSMEGFGTDAFVYLTRLGNTSEPVP 356          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|551603504|ref|XP_005783258.1| (putative pyruvate dehydrogenase kinase [Emiliania huxleyi CCMP1516] >gi|485636232|gb|EOD30829.1| putative pyruvate dehydrogenase kinase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 392.119 bits (1006), Expect = 1.464e-131
Identity = 205/341 (60.12%), Postives = 239/341 (70.09%), Query Frame = 0
Query:  113 TASQQMLQQVACFLHRELPIRFAHRVRDLDAIPV-MREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLE----VHNFLDAFYLSRIGIRMLIGQYLELR-EPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            T  Q+ L Q+A FL RELP+R A RV +L  +P  +  MPS+  V+ WY  SF EIR +  P     EA+F  LL NIY+RHAP L+TMARG +ELRQK  A   E YDL     +H FLD+FY+SRIGIR+LIGQYLEL  E     Y+GL    TSP  +A  A+ DA ++C R HGDAPEV + G    TF Y+  H++Y L ELLKNS+RA  E HG D +MPPI++VIA GE NEDVVIKVSDEGGGIPRSH+ RI+SYLFTTA P    G    S  A D  T SPLAGLGYGLPISR YARYFGGDL+IMSMEGYGTDAF+HLSRLGN  EPLP
Sbjct:    2 TRRQRTLIQIATFLKRELPVRLARRVIELKQLPEGLDAMPSVIRVREWYEQSFVEIRRSKKPVDAEGEAEFCELLHNIYQRHAPTLVTMARGVHELRQKLRAERGEKYDLSDAAPIHGFLDSFYMSRIGIRILIGQYLELHHETQPEGYVGLINRSTSPAFIAEQAMADATYLCERTHGDAPEVLIEGATGCTFTYIPSHLYYCLFELLKNSLRAVCETHGVDGEMPPIKVVIASGEQNEDVVIKVSDEGGGIPRSHMPRIFSYLFTTATPAFDSGSSIFSS-AGDHGTDSPLAGLGYGLPISRTYARYFGGDLNIMSMEGYGTDAFLHLSRLGNRSEPLP 341          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|1072229961|gb|OEU14695.1| (alpha-ketoacid dehydrogenase kinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 389.423 bits (999), Expect = 1.632e-130
Identity = 201/346 (58.09%), Postives = 241/346 (69.65%), Query Frame = 0
Query:  119 LQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTPNTVA-KEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDL----------------EVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVD-LSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            L QVA FL RELPIR AHRV+DL+ +P+M++M S++ VK  Y+ SF E+         A +E  F+ L++ IYERH+ VL+ MARGAYE R      S+   +                 E H FLD FYL RIGIR+LIGQYL LR+PP   Y+G+ C  TSP ++   AIDDA FMCTR++GDAPEV + GRLDLTF YV  H+HYI+LELLKNSMRAT             ++IADG DNEDVVIKVSDEGGGIPRS++ +IWSYLFTTADP IQ G V  + + A D    SPLAGLGYGLPISR+Y RYFGGDLSIMSMEGYGTDAFV+L+RLGN  EP+P
Sbjct:    4 LVQVASFLRRELPIRLAHRVQDLEKVPLMKDMQSVKEVKQLYIQSFLELLEFDKKIVSADQEQAFSRLVEGIYERHSRVLVQMARGAYEFRHHIHKKSTSTKNKSKNTNIRRKDVFAKMEETHAFLDRFYLCRIGIRVLIGQYLALRQPPVDHYVGIICGVTSPYEIVKRAIDDAAFMCTRKYGDAPEVIMSGRLDLTFPYVPTHLHYIMLELLKNSMRAT-------------VIIADGSDNEDVVIKVSDEGGGIPRSNVKKIWSYLFTTADPSIQEGMVGVVENEAVDHGIDSPLAGLGYGLPISRSYCRYFGGDLSIMSMEGYGTDAFVYLARLGNTKEPVP 336          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|922859003|gb|KOO27073.1| (pyruvate dehydrogenase kinase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 386.341 bits (991), Expect = 5.293e-128
Identity = 197/344 (57.27%), Postives = 246/344 (71.51%), Query Frame = 0
Query:  113 TASQQMLQQVACFLHRELPIRFAHRVRDLDAIPV-MREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSS--EFYD-LEVHNFLDAFYLSRIGIRMLIGQYLELREPPKAD-YIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGT--DDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEI----QRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPL 445
            T  Q+ L Q+A FL RELP+R A R  +L  +P  +  M S++ V+ WY  SF +IR +  P  VA E  F  LL  IYERHAP L+TMARG +ELR++ +A +   EF D  E+H FLD FY+SRIGIR+LIGQYLEL    + D Y+GL    TSP +V   A++DA ++C R+HGDAPEV L GR DLTF+Y+  H++YI+ ELLKNS+RAT E HG+    +P ++++IADGE+NEDVVIK+SDEGGGIPRSH+ RIWSYLFTTA P        GF        D  T +PLAGLGYGLPISR+YARYFGGDL++MSMEG+GTDAF+HL RLGN DEPL
Sbjct:   93 TKRQRTLIQIATFLKRELPVRLARRAVELQQLPEGLHNMRSVKRVREWYEHSFVDIRRSAMPVDVATEQAFHDLLHTIYERHAPTLVTMARGVHELRKEMLATNEKGEFADKREIHTFLDKFYMSRIGIRILIGQYLELHREDQLDGYVGLINRHTSPAEVFRQAVEDATYLCEREHGDAPEVVLMGRTDLTFSYIPSHLYYIMFELLKNSLRATCEHHGSKRQTLPVVKVIIADGENNEDVVIKISDEGGGIPRSHMQRIWSYLFTTAKPAFGGAEDGGFSSF----GDHTTDTPLAGLGYGLPISRSYARYFGGDLNLMSMEGHGTDAFLHLPRLGNRDEPL 432          
BLAST of EWM21123.1 vs. NCBI_GenBank
Match: gi|675191283|ref|XP_008904526.1| (hypothetical protein PPTG_10819 [Phytophthora parasitica INRA-310] >gi|566025173|gb|ETI48084.1| hypothetical protein F443_07816 [Phytophthora parasitica P1569] >gi|568050876|gb|ETM47803.1| hypothetical protein L914_07562 [Phytophthora parasitica] >gi|568095321|gb|ETN10089.1| hypothetical protein PPTG_10819 [Phytophthora parasitica INRA-310] >gi|570328832|gb|ETO76780.1| hypothetical protein F444_07883 [Phytophthora parasitica P1976] >gi|570987004|gb|ETP45895.1| hypothetical protein F442_07776 [Phytophthora parasitica P10297] >gi|970623946|gb|KUF71909.1| Pyruvate dehydrogenase kinase protein [Phytophthora nicotianae])

HSP 1 Score: 381.333 bits (978), Expect = 2.200e-126
Identity = 202/386 (52.33%), Postives = 260/386 (67.36%), Query Frame = 0
Query:   84 QTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIP-VMREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELR--------------------QKYVAGSSEFYDL-EVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446
            QTGVSL+ LL+ G G                S Q L Q A FLH E+P+R+AHR+++L+ +P  + +MPS++ V+ WYV S  E+ N P   T   E  F  L+++I  RH+  L TMA+G +EL+                    Q+Y+  S EF DL ++H+FLDAFY+SRIGIRML+ Q++ L E  +  ++G  C  TSP ++AL AID A+ MC RQ+GDAPEV LHG  D +  +V  H+H++L E++KNSMRA  EFHG D DMPPI+IVIADGEDNEDV IK+SDEGGGIPRS +SRIWSYL+TTAD E    F  L  P +DF   SPLAGLGYGLPISR +ARYFGGDL ++SMEGYGTDA++HL R+G+  EPLP
Sbjct:   39 QTGVSLQYLLEFGTG---------------ISPQKLIQSARFLHGEMPVRYAHRIKNLENLPHGLSDMPSVKQVREWYVNSAQELLNFPKVETYQDELAFRDLIESIKGRHSGTLYTMAKGVHELKMELFKSFSEKGHGVTRKELGQRYLR-SQEFADLSDLHSFLDAFYMSRIGIRMLMSQHIALHEEEEG-WVGCICESTSPAEIALAAIDTARHMCLRQYGDAPEVELHGHTDFSMPFVPSHLHHMLFEVIKNSMRAVVEFHGVDNDMPPIKIVIADGEDNEDVSIKISDEGGGIPRSSVSRIWSYLYTTADSE---AFERLEAP-NDFGGDSPLAGLGYGLPISRLFARYFGGDLQVISMEGYGTDAYLHLKRVGDASEPLP 403          
The following BLAST results are available for this feature:
BLAST of EWM21123.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101190|gb|EWM21123.1|0.000e+0100.00Signal transduction histidine kinase, core [Nannoc... [more]
gi|298708245|emb|CBJ48308.1|6.200e-16961.41pyruvate dehydrogenase kinase [Ectocarpus siliculo... [more]
gi|1210516481|dbj|GAX24648.1|5.864e-15159.73pyruvate dehydrogenase kinase 2/3/4 [Fistulifera s... [more]
gi|1210513082|dbj|GAX27898.1|1.862e-15059.78pyruvate dehydrogenase kinase 2/3/4 [Fistulifera s... [more]
gi|224010273|ref|XP_002294094.1|1.646e-14663.16pyruvate dehydrogenase kinase, partial [Thalassios... [more]
gi|219119999|ref|XP_002180748.1|1.095e-14260.58predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|551603504|ref|XP_005783258.1|1.464e-13160.12putative pyruvate dehydrogenase kinase [Emiliania ... [more]
gi|1072229961|gb|OEU14695.1|1.632e-13058.09alpha-ketoacid dehydrogenase kinase [Fragilariopsi... [more]
gi|922859003|gb|KOO27073.1|5.293e-12857.27pyruvate dehydrogenase kinase [Chrysochromulina sp... [more]
gi|675191283|ref|XP_008904526.1|2.200e-12652.33hypothetical protein PPTG_10819 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9587rna9587Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications