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Properties
| Property Name | Value |
|---|
| Product | Signal transduction histidine kinase, core |
| Orig transcript id | gnl|cribi|Naga_100041g27.3693.mrna |
| Orig protein id | gnl|cribi|Naga_100041g27.3693 |
| Gene | PDK1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:234884..237428 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9587 ID=rna9587|Name=rna9587|organism=Nannochloropsis gaditana|type=mRNA|length=1755bp
AGCAATGGTGTTGTCCATTGCGGGGCTGAGTCTTCAATGGGCTTGTTTCC
ACCCTTTGCACCAACTGGGGGCCATTGGAGGATATTATGCCGGATTAGAG
GCTCGCGAGCGACGTTGTCGGACCCAGGAGGTGGACTGAAGGTGACTCAC
TGCACTCTACCAACCCGAACAGAAAAGAAAGAGGGCGTGCGCTGGTGCTC
AAAAGATGAAGCTGGGTCAGACTCTGGCCTTTGCTTTCATTGTGTGTCTT
CAAATGGCTTGGAGCTTCGCCTTTCTTCGCCTAGACCTCTGTCGGCAACC
TGCTTCCCCTCCTTCCTCTGTAGCGCGACGGCGCGCGCTCTCCTTCTCTT
TCGGGGGACGAGACCGATGCCAGTATTTCATGAGCACAGATAATGACAAT
AGTGTCTCCAGCGATAGCGAGCCTTCACCGAATTCCTCCCCTTTTCCAGA
TGATCGTCCTCTCAATTCAGTCGAGCAACGACGTGTGACCCGCGCAGCCA
AGACGGATAAAGCCCGTAAGCTCTCCAAAAACGCACGTCTCATGGATGAC
TTTTTCGGGAAGCGCCTTGGTCAGGGATCAGTTTTCTACGGTGAGCGACT
GTCAGACTTGGACGATGAGGAGTACGCGAGAAAGGTGGAGGCCAGCAACG
ACAACGACGAGCGTCTGGAGGTGCGGGCGCTACGTGACAACCCAGTGCTG
GTGGTGGGGGCCACGGGGAAGACCGGTCAATGGGTAGTCACGGACCTCCT
CTCCAAAGGTTTTAGTGTACGAGCGTTCGTACGTAACCTGGACAAAGCCG
AAGATCTGTTCGGTTGGGACGGGTCGAACCTGGACGTCTTTGAGGGGAAC
GTGAAAGACTTGGCGTCCCTGACCGAGGCGACACGAGGGGCGCTGGCCGT
CATCTACTGTGCGGGGTCTCGAGAGATAATAGGCCCTAATGCCTTCCAAC
AGGTGGACGGGCTTGGCGTGGAGAACGCGGTGAAAGCTGCGCAGCTCTCT
GGAGGGGAGGAGCCAGGCTCAGAGCCGTCGGTGCGCAAGTTTATTTTGCT
CTCAAGCATCGGCGTATCTCGGCCAGAGGAGTACGGATTTCTCGGTAAGC
TCCTAGGAGACCCCTTGAGAGCCAAGGCACGTGGGGAGGCGGCGGTGCGA
AGGAGCGGGCTCGAGTCGTACTGCATCGTCCGGGGGGGGGGGTTGAGGGA
CGGTGACGGGACGAAACGAGCGATCGAGATCGCCCAAGGCGACGTGTTCG
GGAAGTGCGGCGTCTCCCGACTTGACCTGGCGCAGGTGCTGGTCCAAGTT
CTGGTGCAAGACGTGAACAACGTGACCTTCGAGGTGAAGAACGATGACTC
GCGGAGGGAAGATCAGGCCCGTCTGAACGAGATCCTCTCCACTGCTGACC
AACGGCAGATCGTGGAGTACTTCTTGAGGGAGGACGCTAAAGAGGAGGAG
ATGTGGGCTCGGCGGTTGCAAGCACTAAAGCCTGACATTATTTAGGAAAT
CTCGTGGGGAACTGACTGATTGTCGCTGGTAAAGTAGGAAAGAAAATTCA
AGCGATTTTGAAATGCAAGCGCATAAGATGGACAATTTGAAAAAGGTAAC
CAGTTTGCATTGGCTTTGACTTATCAGAAAGGGCGCCGAGCTAAAGAGCT
ATCAGCGGTGGCTTCTTTAGCATGTCGGCCTGCCTTTCCTGCTTGCTGCT
TGACTAGAAGTGACTTTCCAAGGTGATAAGCAGCGCCAATTCATTTTCTT
AGACG back to topprotein sequence of rna9587 >rna9587-protein ID=rna9587-protein|Name=rna9587|organism=Nannochloropsis gaditana|type=polypeptide|length=446bp
MMAGGVALLSFAVRQAVRRPKCGSGGVLRPLSMLSNSHRQVSQPHGSARP
SSSLGSLNYAHVAPDPLADPGVFDDINTYSCKRQTGVSLKTLLDTGRGHL
LQKKYFGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREM
PSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTM
ARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREP
PKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTF
AYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIK
VSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAG
LGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP back to topmRNA from alignment at KK037254.1:234884..237428- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9587 ID=rna9587|Name=rna9587|organism=Nannochloropsis gaditana|type=mRNA|length=2545bp|location=Sequence derived from alignment at KK037254.1:234884..237428- (Nannochloropsis gaditana)
AACATCGAAATCTGAGAAGGTTTTCCCCAAATGCCGGGCGGCTCAGTCAG
CAACGCGGTCTGGCACCACCGCCCGGCATAGCGGGAGGGAGACGGGCCTG
GGAGGCTCTTCGAGGCCCGCCCACTTGACTGCCACGCTCCTTCAGGCGTT
TCCGGTAAATGTACATCGACCTCATCACTATACTGCGCGATTCGTCTCGC
CCCTTGTAAAGAGGGCGTGGGGATAGGAGCACAGAAAACTCGGAATTACT
GATAGTACGGCAGCGCCCCGACCCGCTCGACCTCAACCTCAATCCCTCAG
ACCGCCTTTTTCTTGCATTTCTGCAACGCTCTTTCTAAACGCACTACAGT
TCATCTTATGATGGCCGGTGGCGTAGCTTTACTGTCTTTTGCGGTGAGGC
AGGCCGTAAGGAGACCAAAATGCGGCAGTGGAGGTGTGCTGCGGCCTTTG
TCGATGCTGTCGAATAGCCATCGTCAAGTTTCACAGCCCCATGGTAGCGC
CCGGCCATCTTCTAGTCTCGGCTCTCTTAACTACGCCCACGTGGCACCAG
ATCCACTAGCGGACCCAGGCGTCTTTGATGACATCAACACGTACTCGTGC
AAACGCCAGACAGGCGTGTCTCTCAAGACATTGCTGGACACGGGTGAGTA
GGGGGGCATGCACTGAAGGCGGCAGGTCTCCTGAGAGAAGAGGACAAAAA
CCCATGAGACCATGCCATTTGGAGATAAAAAGAGATACGATTTAAAGAAA
ATGAGTATCTATGCGAACCGAAATGCGGAAGGCAGACCGGTTCTGAGCGC
TTCTTCATTTGATTGGCCCTTCCCCACACACACACCACACAGGGCGAGGC
CATTTACTGCAAAAGAAATATTTTGGCAAAGAGGAAAACACGACGGCTAG
CCAACAAATGCTGCAGCAGGTGGCTTGCTTCCTGCACCGGGAGCTGCCAA
TTCGCTTCGCGCACCGTGTCCGGGACCTCGACGCTATGTACGTGCTCGCT
CTGCCTGCTTCAACGGCCCTCTAGCGTCCCACCTGCTCCTTGCCGGGTCA
TTTCCATTTCTAATGGCGTTTCTCCGACATACTAACATGTCTCTTGATTG
TCCATTGTTTATCGCTTCTGTTAATCATATTCTCTCCTACTTTCTCATCC
CACATCCGCCTCTATCCACATCTGCCTCTTTCCCTCCAGCCCGGTCATGA
GGGAGATGCCCTCGATTCAGCTCGTCAAGACTTGGTACGTCACCTCCTTC
CACGAAATCCGAAATGCGCCGACGCCTAACACTGTGGCGAAGGAGGCAGA
CTTCGCTGTCTTGCTGAAGAATATCTACGAGCGGCATGCCCCCGTCCTCC
TGACCATGGCCAGGGGCGCCTACGAGCTCCGCCAGAAATACGTGGCGGGC
TCGAGCGAGTTCTACGACTTGGAGGTGCACAACTTCCTCGACGCTTTCTA
CTTGAGTCGCATTGGGATTCGTATGCTGATTGGCCAGTATCTAGGTAAGG
AGGAAAGGGACAAGAGGGTCTCTCTTGGCATAAGCCTCATACATATTCGC
TTCTGTCTTACACTCACAGAGCTGCGCGAGCCCCCCAAAGCCGACTATAT
TGGCCTCTGCTGTCTACGAACGTCTCCCCGCGATGTCGCCCTGACCGCCA
TAGACGACGCCAAGTTCATGTGCACGCGCCAGCACGGCGACGCCCCTGAG
GTGACGCTCCACGGGCGCTTGGACCTGACCTTCGCCTACGTGTCCGAGCA
CGTTCATTACATCCTGCTGGAGCTCCTGAAGAATAGCATGCGGGCGACGG
CTGAGTTTCATGGGACCGATGACATGCCTCCCATCCGCATTGTCATCGCA
GACGGGGAGGACAATGAGGACGTGGTTATCAAGGTCTCGGACGAAGGGGG
AGGGATCCCGCGCTCGCACATAAGTCGGATATGGAGCTATCTTTTTACAA
CCGCGGACCCGGAGATACAGAGAGGCTTCGTAGACCTTTCGCATCCGGCA
TCGGACTTTGACACGGCCTCGCCGTTGGCAGGCCTGGGCTACGGACTGCC
GATCAGCAGGGCGTACGCACGCTACTTTGGAGGCGACCTGTCGATCATGT
CCATGGAAGGGTATGGCACCGATGCCTTCGTGCATTTGAGTCGACTTGGG
AACCATGACGAGCCTTTGCCTTGAGCGCATCCACACGGACAGCGGAGGCT
AGAGTTTACGATTTTGGAAGACAAGCGTGCCTGGGTAGAGGTCGTGGAAA
GCTTGGGAGTGGCGGGCTTCCCACAGGGCCGAGTACGTGAGGAATGGGTT
GTATGGGCGCCTTGACGAGTTAAGAAAGAAGTAAAATTGAAATATCAACC
ACGCGTCATAACTGCACGTCTAAGAAAATGAATTGGCGCTGCTTATCACC
TTGGAAAGTCACTTCTAGTCAAGCAGCAAGCAGGAAAGGCAGGCCGACAT
GCTAAAGAAGCCACCGCTGATAGCTCTTTAGCTCGGCGCCCTTTCTGATA
AGTCAAAGCCAATGCAAACTGGTTACCTTTTTCAAATTGTCCATC back to topCoding sequence (CDS) from alignment at KK037254.1:234884..237428- >rna9587 ID=rna9587|Name=rna9587|organism=Nannochloropsis gaditana|type=CDS|length=5364bp|location=Sequence derived from alignment at KK037254.1:234884..237428- (Nannochloropsis gaditana)
AGCTGCGCGAGCCCCCCAAAGCCGACTATATTGGCCTCTGCTGTCTACGA
ACGTCTCCCCGCGATGTCGCCCTGACCGCCATAGACGACGCCAAGTTCAT
GTGCACGCGCCAGCACGGCGACGCCCCTGAGGTGACGCTCCACGGGCGCT
TGGACCTGACCTTCGCCTACGTGTCCGAGCACGTTCATTACATCCTGCTG
GAGCTCCTGAAGAATAGCATGCGGGCGACGGCTGAGTTTCATGGGACCGA
TGACATGCCTCCCATCCGCATTGTCATCGCAGACGGGGAGGACAATGAGG
ACGTGGTTATCAAGGTCTCGGACGAAGGGGGAGGGATCCCGCGCTCGCAC
ATAAGTCGGATATGGAGCTATCTTTTTACAACCGCGGACCCGGAGATACA
GAGAGGCTTCGTAGACCTTTCGCATCCGGCATCGGACTTTGACACGGCCT
CGCCGTTGGCAGGCCTGGGCTACGGACTGCCGATCAGCAGGGCGTACGCA
CGCTACTTTGGAGGCGACCTGTCGATCATGTCCATGGAAGGGTATGGCAC
CGATGCCTTCGTGCATTTGAGTCGACTTGGGAACCATGACGAGCCTTTGC
CTTGACCCGGTCATGAGGGAGATGCCCTCGATTCAGCTCGTCAAGACTTG
GTACGTCACCTCCTTCCACGAAATCCGAAATGCGCCGACGCCTAACACTG
TGGCGAAGGAGGCAGACTTCGCTGTCTTGCTGAAGAATATCTACGAGCGG
CATGCCCCCGTCCTCCTGACCATGGCCAGGGGCGCCTACGAGCTCCGCCA
GAAATACGTGGCGGGCTCGAGCGAGTTCTACGACTTGGAGGTGCACAACT
TCCTCGACGCTTTCTACTTGAGTCGCATTGGGATTCGTATGCTGATTGGC
CAGTATCTAGGGCGAGGCCATTTACTGCAAAAGAAATATTTTGGCAAAGA
GGAAAACACGACGGCTAGCCAACAAATGCTGCAGCAGGTGGCTTGCTTCC
TGCACCGGGAGCTGCCAATTCGCTTCGCGCACCGTGTCCGGGACCTCGAC
GCTATATGATGGCCGGTGGCGTAGCTTTACTGTCTTTTGCGGTGAGGCAG
GCCGTAAGGAGACCAAAATGCGGCAGTGGAGGTGTGCTGCGGCCTTTGTC
GATGCTGTCGAATAGCCATCGTCAAGTTTCACAGCCCCATGGTAGCGCCC
GGCCATCTTCTAGTCTCGGCTCTCTTAACTACGCCCACGTGGCACCAGAT
CCACTAGCGGACCCAGGCGTCTTTGATGACATCAACACGTACTCGTGCAA
ACGCCAGACAGGCGTGTCTCTCAAGACATTGCTGGACACGGAGCTGCGCG
AGCCCCCCAAAGCCGACTATATTGGCCTCTGCTGTCTACGAACGTCTCCC
CGCGATGTCGCCCTGACCGCCATAGACGACGCCAAGTTCATGTGCACGCG
CCAGCACGGCGACGCCCCTGAGGTGACGCTCCACGGGCGCTTGGACCTGA
CCTTCGCCTACGTGTCCGAGCACGTTCATTACATCCTGCTGGAGCTCCTG
AAGAATAGCATGCGGGCGACGGCTGAGTTTCATGGGACCGATGACATGCC
TCCCATCCGCATTGTCATCGCAGACGGGGAGGACAATGAGGACGTGGTTA
TCAAGGTCTCGGACGAAGGGGGAGGGATCCCGCGCTCGCACATAAGTCGG
ATATGGAGCTATCTTTTTACAACCGCGGACCCGGAGATACAGAGAGGCTT
CGTAGACCTTTCGCATCCGGCATCGGACTTTGACACGGCCTCGCCGTTGG
CAGGCCTGGGCTACGGACTGCCGATCAGCAGGGCGTACGCACGCTACTTT
GGAGGCGACCTGTCGATCATGTCCATGGAAGGGTATGGCACCGATGCCTT
CGTGCATTTGAGTCGACTTGGGAACCATGACGAGCCTTTGCCTTGACCCG
GTCATGAGGGAGATGCCCTCGATTCAGCTCGTCAAGACTTGGTACGTCAC
CTCCTTCCACGAAATCCGAAATGCGCCGACGCCTAACACTGTGGCGAAGG
AGGCAGACTTCGCTGTCTTGCTGAAGAATATCTACGAGCGGCATGCCCCC
GTCCTCCTGACCATGGCCAGGGGCGCCTACGAGCTCCGCCAGAAATACGT
GGCGGGCTCGAGCGAGTTCTACGACTTGGAGGTGCACAACTTCCTCGACG
CTTTCTACTTGAGTCGCATTGGGATTCGTATGCTGATTGGCCAGTATCTA
GGGCGAGGCCATTTACTGCAAAAGAAATATTTTGGCAAAGAGGAAAACAC
GACGGCTAGCCAACAAATGCTGCAGCAGGTGGCTTGCTTCCTGCACCGGG
AGCTGCCAATTCGCTTCGCGCACCGTGTCCGGGACCTCGACGCTATATGA
TGGCCGGTGGCGTAGCTTTACTGTCTTTTGCGGTGAGGCAGGCCGTAAGG
AGACCAAAATGCGGCAGTGGAGGTGTGCTGCGGCCTTTGTCGATGCTGTC
GAATAGCCATCGTCAAGTTTCACAGCCCCATGGTAGCGCCCGGCCATCTT
CTAGTCTCGGCTCTCTTAACTACGCCCACGTGGCACCAGATCCACTAGCG
GACCCAGGCGTCTTTGATGACATCAACACGTACTCGTGCAAACGCCAGAC
AGGCGTGTCTCTCAAGACATTGCTGGACACGGAGCTGCGCGAGCCCCCCA
AAGCCGACTATATTGGCCTCTGCTGTCTACGAACGTCTCCCCGCGATGTC
GCCCTGACCGCCATAGACGACGCCAAGTTCATGTGCACGCGCCAGCACGG
CGACGCCCCTGAGGTGACGCTCCACGGGCGCTTGGACCTGACCTTCGCCT
ACGTGTCCGAGCACGTTCATTACATCCTGCTGGAGCTCCTGAAGAATAGC
ATGCGGGCGACGGCTGAGTTTCATGGGACCGATGACATGCCTCCCATCCG
CATTGTCATCGCAGACGGGGAGGACAATGAGGACGTGGTTATCAAGGTCT
CGGACGAAGGGGGAGGGATCCCGCGCTCGCACATAAGTCGGATATGGAGC
TATCTTTTTACAACCGCGGACCCGGAGATACAGAGAGGCTTCGTAGACCT
TTCGCATCCGGCATCGGACTTTGACACGGCCTCGCCGTTGGCAGGCCTGG
GCTACGGACTGCCGATCAGCAGGGCGTACGCACGCTACTTTGGAGGCGAC
CTGTCGATCATGTCCATGGAAGGGTATGGCACCGATGCCTTCGTGCATTT
GAGTCGACTTGGGAACCATGACGAGCCTTTGCCTTGACCCGGTCATGAGG
GAGATGCCCTCGATTCAGCTCGTCAAGACTTGGTACGTCACCTCCTTCCA
CGAAATCCGAAATGCGCCGACGCCTAACACTGTGGCGAAGGAGGCAGACT
TCGCTGTCTTGCTGAAGAATATCTACGAGCGGCATGCCCCCGTCCTCCTG
ACCATGGCCAGGGGCGCCTACGAGCTCCGCCAGAAATACGTGGCGGGCTC
GAGCGAGTTCTACGACTTGGAGGTGCACAACTTCCTCGACGCTTTCTACT
TGAGTCGCATTGGGATTCGTATGCTGATTGGCCAGTATCTAGGGCGAGGC
CATTTACTGCAAAAGAAATATTTTGGCAAAGAGGAAAACACGACGGCTAG
CCAACAAATGCTGCAGCAGGTGGCTTGCTTCCTGCACCGGGAGCTGCCAA
TTCGCTTCGCGCACCGTGTCCGGGACCTCGACGCTATATGATGGCCGGTG
GCGTAGCTTTACTGTCTTTTGCGGTGAGGCAGGCCGTAAGGAGACCAAAA
TGCGGCAGTGGAGGTGTGCTGCGGCCTTTGTCGATGCTGTCGAATAGCCA
TCGTCAAGTTTCACAGCCCCATGGTAGCGCCCGGCCATCTTCTAGTCTCG
GCTCTCTTAACTACGCCCACGTGGCACCAGATCCACTAGCGGACCCAGGC
GTCTTTGATGACATCAACACGTACTCGTGCAAACGCCAGACAGGCGTGTC
TCTCAAGACATTGCTGGACACGGAGCTGCGCGAGCCCCCCAAAGCCGACT
ATATTGGCCTCTGCTGTCTACGAACGTCTCCCCGCGATGTCGCCCTGACC
GCCATAGACGACGCCAAGTTCATGTGCACGCGCCAGCACGGCGACGCCCC
TGAGGTGACGCTCCACGGGCGCTTGGACCTGACCTTCGCCTACGTGTCCG
AGCACGTTCATTACATCCTGCTGGAGCTCCTGAAGAATAGCATGCGGGCG
ACGGCTGAGTTTCATGGGACCGATGACATGCCTCCCATCCGCATTGTCAT
CGCAGACGGGGAGGACAATGAGGACGTGGTTATCAAGGTCTCGGACGAAG
GGGGAGGGATCCCGCGCTCGCACATAAGTCGGATATGGAGCTATCTTTTT
ACAACCGCGGACCCGGAGATACAGAGAGGCTTCGTAGACCTTTCGCATCC
GGCATCGGACTTTGACACGGCCTCGCCGTTGGCAGGCCTGGGCTACGGAC
TGCCGATCAGCAGGGCGTACGCACGCTACTTTGGAGGCGACCTGTCGATC
ATGTCCATGGAAGGGTATGGCACCGATGCCTTCGTGCATTTGAGTCGACT
TGGGAACCATGACGAGCCTTTGCCTTGACCCGGTCATGAGGGAGATGCCC
TCGATTCAGCTCGTCAAGACTTGGTACGTCACCTCCTTCCACGAAATCCG
AAATGCGCCGACGCCTAACACTGTGGCGAAGGAGGCAGACTTCGCTGTCT
TGCTGAAGAATATCTACGAGCGGCATGCCCCCGTCCTCCTGACCATGGCC
AGGGGCGCCTACGAGCTCCGCCAGAAATACGTGGCGGGCTCGAGCGAGTT
CTACGACTTGGAGGTGCACAACTTCCTCGACGCTTTCTACTTGAGTCGCA
TTGGGATTCGTATGCTGATTGGCCAGTATCTAGGGCGAGGCCATTTACTG
CAAAAGAAATATTTTGGCAAAGAGGAAAACACGACGGCTAGCCAACAAAT
GCTGCAGCAGGTGGCTTGCTTCCTGCACCGGGAGCTGCCAATTCGCTTCG
CGCACCGTGTCCGGGACCTCGACGCTATATGATGGCCGGTGGCGTAGCTT
TACTGTCTTTTGCGGTGAGGCAGGCCGTAAGGAGACCAAAATGCGGCAGT
GGAGGTGTGCTGCGGCCTTTGTCGATGCTGTCGAATAGCCATCGTCAAGT
TTCACAGCCCCATGGTAGCGCCCGGCCATCTTCTAGTCTCGGCTCTCTTA
ACTACGCCCACGTGGCACCAGATCCACTAGCGGACCCAGGCGTCTTTGAT
GACATCAACACGTACTCGTGCAAACGCCAGACAGGCGTGTCTCTCAAGAC
ATTGCTGGACACGG back to top
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