PDK1, gene9306 (gene) Nannochloropsis gaditana

Overview
NamePDK1
Unique Namegene9306
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:234884..237428 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100041g27
Gene biotypeprotein_coding
GenePDK1
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:234884..237428 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0065009regulation of molecular function
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL083ngnoL083Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL082ngnoL082Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00570NO24G00570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9587rna9587-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9587rna9587Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9587

>rna9587-protein ID=rna9587-protein|Name=rna9587|organism=Nannochloropsis gaditana|type=polypeptide|length=446bp
MMAGGVALLSFAVRQAVRRPKCGSGGVLRPLSMLSNSHRQVSQPHGSARP
SSSLGSLNYAHVAPDPLADPGVFDDINTYSCKRQTGVSLKTLLDTGRGHL
LQKKYFGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREM
PSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTM
ARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREP
PKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTF
AYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIK
VSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAG
LGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP
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Synonyms
Publications