EWM21115.1, cds9550 (CDS) Nannochloropsis gaditana

Overview
NameEWM21115.1
Unique Namecds9550
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:220740..220873 -
Alignment locationKK037254.1:220534..220663 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21115.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100041g21.3685.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:220740..220873 -
KK037254.1supercontigKK037254.1:220534..220663 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21115.1 vs. NCBI_GenBank
Match: gi|585101182|gb|EWM21115.1| (hypothetical protein Naga_100041g21 [Nannochloropsis gaditana])

HSP 1 Score: 181.03 bits (458), Expect = 8.458e-58
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 
Query:    1 MLTKPRHICSQKHNQTSSKAPSPIVPEASSLLDVPWYTIFARLGIKKGLERPLRASALTVCVASHTQQCVLCWTPWNRKTRSGKRKY 87
            MLTKPRHICSQKHNQTSSKAPSPIVPEASSLLDVPWYTIFARLGIKKGLERPLRASALTVCVASHTQQCVLCWTPWNRKTRSGKRKY
Sbjct:    1 MLTKPRHICSQKHNQTSSKAPSPIVPEASSLLDVPWYTIFARLGIKKGLERPLRASALTVCVASHTQQCVLCWTPWNRKTRSGKRKY 87
The following BLAST results are available for this feature:
BLAST of EWM21115.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101182|gb|EWM21115.1|8.458e-58100.00hypothetical protein Naga_100041g21 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9581rna9581Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications