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Properties
| Property Name | Value |
|---|
| Product | ubiquitin-conjugating enzyme e2 j2 isoform 2 |
| Orig transcript id | gnl|cribi|Naga_100108g8.7746.mrna |
| Orig protein id | gnl|cribi|Naga_100108g8.7746 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037254.1 | supercontig | KK037254.1:121308..122717 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9540 ID=rna9540|Name=rna9540|organism=Nannochloropsis gaditana|type=mRNA|length=2819bp
CGTGAACGGAGAAGTCCCCCTTTCTTTGAACGCAAAGCGCACACAGCACG
CACAGCGCCCGAGTCGTTCAATTATTTACCAATCATGTTTGTAGAGTTTG
TTTGCCCTGATTTTGATTGACCGTTGGCAGACAAAAATATATTTCCATGT
GTTAGGTAGTTTGACTTGGAAATGGCATGATCCCTTGCGACCATCATCAT
CATCTTCGTCACTTGTCTTGAGAGAGAACCATCCTGGAAAGAGTCATTTC
GCTTACACGTAATCGACACCAAAGTCCTACACTCTGGTTGAGATAGATTC
TAAACCTCTTGACATGCATGTATGGGGTGCCAAGGCTGAACGACTGTCAG
CGTCTGCGTTCTTTGTGCTTCATACCTCTTACATCCGGGTATCGCAGACT
TCAAATGTTTTCTTCGAATGCCCTTTTGCAAAAAACAGTACGATAGAAAC
CTTATATTCATGCCAACATTCCTGACAGGAGCCCCTTACACGTCATAATT
GAGGAACTGACGAGGATTCGAACGAATAGGCTGTTCCAAACCGACCTATT
GTGGCCTTCGGGCCACTCCACCGCCGGGGCAAGGTCTTCGTTGTCAGAAG
GCAGACTTCGCAAAAGCAGGAGTAGGAGTGTTATTCGTCTACCAACTTAT
ATTTAAGTTTATTCACGAGAGGAAGGAAACAGGAACAAAGGGCGGTCGCA
CATTTTTGGGAGCACATAAGTGTCAAGACTAGCAGCGAAGTTGGTGGTGA
AGCATGAAGCGCGAAGTAAAAACCCGTACGGTTGACATTTGGAGAGCCCT
TCCCGTCGTTCGCTCTCTTGAAGATACCGAATGTCGCGGAAGCAATGGAG
GAGTGGGCGGTATGGAGGAGGACGATGAGAATGGCATGTCCCAACAAGCC
CCTCCTACCCGCACACGAGGACTTGAGCGATCGTCGAGCACCAGTGCAGT
AAAGTCTGGGACAGGAGGGAGCATGAGCAGCAGCAACTTGGATCAAGAGA
AGGATAAAATCCTGACAAGCAAAATCCCTGAGATCAAGGCCAAGGAAATT
CCAGTCCCTCAGATCGAAACATCAGCAGACTACGACACTGTAGTGGCGGA
GGCCTCTTTCAAGCTGCCCGACTCTTACATCCGCACGAAGAAGCTACCAC
TTTTGCCACCGGGAGTAGAAATAGAGGGTCTCGAGTACAATTTGGAGCTG
GAGGATGAGGAGTGGTTGAAGGGACACAAAATTATCGGGCCGAGGGGGGA
AATGGCCGGTGCGGCGGATGCGGACAAATTAGAGAAAATGATAGACGAGC
TTGAGAAAGCCACAGGGGCCGGAGAAGCTATCACTCTGATGGATGCTGAA
TCCGTATTGGAAGCGCGTTTGGGTATGCAGCCGATTGGGTCGAACAAAAC
GGTTATCGCCGAGGTGTGGGCGTACTGGTCAGGAAAACGGGCACGATTGA
AAAAACCCTTACTTCGACGGTTTTGGCCCATCACTTCCATCAACGATAGC
AACCCGCACCTAGTCTTCCGGCCCCGAGAAAAAGAGCGCTACAAACTTCG
CAAACATCGAAAGAACGACGGAGAAGCCTATCGACGGTTGCAGCTCCTTC
GCCGGGACTTCGGTCAGGTGGAGCAGTTGCTGAACATGGTCAGGCGGCGC
GAGCAAATCAAGCTGGCCAGGTTGAAGCTGCAGGAGGAGATGTATCTTCA
AACACTGGCCGAGATGTGCGGACAGGCGCGCAAGCCGAAGATTCCAAAGG
AGGCGGTCTACGCCGGGAGTGGAGGAGGAGGGGAGTTGAAGTTGAAGATA
CGCCTGCCCTCGATGGGTTTGGGCGAAGATGGCCGCCCTCGGAAGAAGCG
GCTACGGGATGAGATGGAGAGGATGGAGCCCGGTGGACGGCGGGGGGGGC
CTCCGCAGGATGCAAACCCCGAGCAGGAACGGCTACGGAGGGCGGTGGCC
TGCGGGTTTCGAGAGAGAGAAGGGGCGCTGGCCACCCCGGACTACCTCCC
GTCTTTCATGGAGGCGTTCGGGTTCCGGCACCACGGACAAGCGGTGCCGC
CACCACCGCATGGCATGTCCAGGTCCTGGTTGCCCTTTTCGGACGAGGCG
TCGACTACCTATGGTTGGCGGGGCTTGAGGGAGGGCTCCGGCGGAAAGGT
GGGCCACGTCCGGAGTGGCTTATTGACGGCACCGCGTTGTCCGCCCATTG
ACTACGACGGGGAAGATACGAGCATTCGGTACCGGTGTCGGGCCAGGATG
GGCCGGGGGGGTAGGATGGTCTTTGACCGTGTGCCCATCGCGCCCAGGCT
GCCCAAGCCCTTGATGTTGATGGAGACAGGCAAGCCGGGAGAGGAAGTGG
AGGAAGGCGGAGGGGAAAGCGGGAGGGATGCGGGCGTAGAGGAGCAAGAA
AACGTGGCTCCCGAGCAATGTGCCCCTCGGGCACTGACGTCTTCCGTCTT
GCTGAGCGCAGGCCTCGAGGTTCCCCAGCTGGACCGGTACCCGGATGTGG
ACTTACTTGGAGGGTCTCTTTTCAAGTACCCCACACGCTTCCGGGAAATT
AGTCACCTGCTGGACGACACGGAGGAGGAGGTGCTGGAGATCAACCCCGC
GGCCCCCTCGGATCCTGATCCATTGCTTGTGATCCCCTCCAAGCCGGCGC
CGCCTGAGACTGACGCGCTGGCCGTGTTGAGGTTTGCCTTGCCTGTCTAA
GCGGACTCTTTTGAGGGAGAGGGGAGGAAGAAGGTTGGCAGGGAGAGTGT
TGAGGGAAAGCGACTGATTAATGACGAAGAGCGACGGCGTCAAAAGAAAA
TCAACGCGTGGCTCTGTAT back to topprotein sequence of rna9540 >rna9540-protein ID=rna9540-protein|Name=rna9540|organism=Nannochloropsis gaditana|type=polypeptide|length=199bp
MYTGLKVMATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKG
AKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDF
HPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFN
LTSPLFVQMFPEIRCMRLVRVSGLGQPGKVSRVQMVEECRGRDLEKTEG back to topmRNA from alignment at KK037254.1:121308..122717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9540 ID=rna9540|Name=rna9540|organism=Nannochloropsis gaditana|type=mRNA|length=1410bp|location=Sequence derived from alignment at KK037254.1:121308..122717- (Nannochloropsis gaditana)
ATGTACACAGGCTTGAAAGTCATGGCAACAACCTTGTCCGCCAAGCGTTT
GCGGAAGGAGCTCATTGCTTTGCAGCGGGACCCCGTCGAAAATATCACGG
CACGTCCTCTGGAAAGGTAGGATGGCTGCACACAGGATCCTCACACATGT
TGAAGGCAATTAAAACATTGAGGTGAAGAGCGTGTCAATGCAGCGGAAGA
CATTTAGATTTACAATGTATCTCATCACCTGGCCTCGAAGGTCTACCGCC
TCTAATGTAGACGTATTGAACCTTTGTTTTACACCAAACTACGCCCCCCC
CCCCCAGTAACATCCTCGTATGGCACTACGTCTTAAAAGGCGCTAAGGGA
AGCCCGTACGAAGGCGGCTACTACCATGGCAAACTTAAGTTTCCTCCTGA
ATACCCACTAAAGCCGCCATCCATCATGATGCTGACTCCCTCTGGGCGCT
TCAAGCCTAACACACGTTTATGTCTGTCCATGTGAGTGGCACGCCGCTTT
GCTGCTTCCTGCTGTCGCAATCCTCCCACCGGTCATTTTCCTTGTCCACA
AGTTTGCAACACCTCATAAGCCATGCTTTCTTCACATCCCTTGCCTCCCG
CCTGGTCGTTGTGCACTGAATTGTCTCCTCCCCTGCCTCCCTTCCTCCCT
CCCTCCCTCCCCACCTCGCTCCCTCCCCCGCAGGTCTGACTTCCACCCAG
AGACCTGGAACCCCATGTGGTCGGTGAGCACGATTCTGATGGGCCTCCAA
GCCTTCATGCTCGACTCGGCGCCGACCTTGGGCAGCATCGAGACCTCCCT
GGGGCAGAAGAAGAAGCTGGCTGCGTCCAGCATGGCCTTCAACCTGACCA
GCCCTCTCTTCGTGCAGATGTTCCCCGAGGTGGTGGCGGAGGAGGAGGAG
AGGCGGAGAAGGAGACAGGAGGAGGGTGGACGGGAGCCACGGGGGGAGGG
CGGGGAAGGGATGGCGGGGAAGGGCGTGCTGGGGGGGCTGTTGGGGGTGG
TGGGGGGAAAAGGAGGCGGAAGGGGGCCGGGGGGGGGGGGCGGTAGGAGA
AGGTGGAAGCGTGAATGGGGAGGGGCACAGACGAAGGCTGAGGCAGGAGG
ATGCGGAGACGAGCCTGTCGGTGCTTGTGCTCTTGGTGAGCGTGGCCCTG
GGCCTGCTGGCCGTGCTCCTCCGCCTGTCCGTCTGAGGGCGGGAGGAAGG
ACGGGGGGAGGGAGGTGGTGGTGGAGAGACTGTGGGGGAGTAAGGGAAAG
GGAGGCATGGAGTAGAGGAGTACAATCAAAGCAATCATGTGCATAGATCA
GATGTATGCGGCTGGTAAGGGTGTCGGGGCTTGGACAGCCGGGAAAGGTC
TCTCGTGTTCAAATGGTAGAAGAGTGCAGGGGCCGCGACCTTGAGAAGAC
GGAGGGATAG back to topCoding sequence (CDS) from alignment at KK037254.1:121308..122717- >rna9540 ID=rna9540|Name=rna9540|organism=Nannochloropsis gaditana|type=CDS|length=2400bp|location=Sequence derived from alignment at KK037254.1:121308..122717- (Nannochloropsis gaditana)
ATCAGATGTATGCGGCTGGTAAGGGTGTCGGGGCTTGGACAGCCGGGAAA
GGTCTCTCGTGTTCAAATGGTAGAAGAGTGCAGGGGCCGCGACCTTGAGA
AGACGGAGGGATAGGTCTGACTTCCACCCAGAGACCTGGAACCCCATGTG
GTCGGTGAGCACGATTCTGATGGGCCTCCAAGCCTTCATGCTCGACTCGG
CGCCGACCTTGGGCAGCATCGAGACCTCCCTGGGGCAGAAGAAGAAGCTG
GCTGCGTCCAGCATGGCCTTCAACCTGACCAGCCCTCTCTTCGTGCAGAT
GTTCCCCGAGTAACATCCTCGTATGGCACTACGTCTTAAAAGGCGCTAAG
GGAAGCCCGTACGAAGGCGGCTACTACCATGGCAAACTTAAGTTTCCTCC
TGAATACCCACTAAAGCCGCCATCCATCATGATGCTGACTCCCTCTGGGC
GCTTCAAGCCTAACACACGTTTATGTCTGTCCATATGTACACAGGCTTGA
AAGTCATGGCAACAACCTTGTCCGCCAAGCGTTTGCGGAAGGAGCTCATT
GCTTTGCAGCGGGACCCCGTCGAAAATATCACGGCACGTCCTCTGGAAAG
ATCAGATGTATGCGGCTGGTAAGGGTGTCGGGGCTTGGACAGCCGGGAAA
GGTCTCTCGTGTTCAAATGGTAGAAGAGTGCAGGGGCCGCGACCTTGAGA
AGACGGAGGGATAGGTCTGACTTCCACCCAGAGACCTGGAACCCCATGTG
GTCGGTGAGCACGATTCTGATGGGCCTCCAAGCCTTCATGCTCGACTCGG
CGCCGACCTTGGGCAGCATCGAGACCTCCCTGGGGCAGAAGAAGAAGCTG
GCTGCGTCCAGCATGGCCTTCAACCTGACCAGCCCTCTCTTCGTGCAGAT
GTTCCCCGAGTAACATCCTCGTATGGCACTACGTCTTAAAAGGCGCTAAG
GGAAGCCCGTACGAAGGCGGCTACTACCATGGCAAACTTAAGTTTCCTCC
TGAATACCCACTAAAGCCGCCATCCATCATGATGCTGACTCCCTCTGGGC
GCTTCAAGCCTAACACACGTTTATGTCTGTCCATATGTACACAGGCTTGA
AAGTCATGGCAACAACCTTGTCCGCCAAGCGTTTGCGGAAGGAGCTCATT
GCTTTGCAGCGGGACCCCGTCGAAAATATCACGGCACGTCCTCTGGAAAG
ATCAGATGTATGCGGCTGGTAAGGGTGTCGGGGCTTGGACAGCCGGGAAA
GGTCTCTCGTGTTCAAATGGTAGAAGAGTGCAGGGGCCGCGACCTTGAGA
AGACGGAGGGATAGGTCTGACTTCCACCCAGAGACCTGGAACCCCATGTG
GTCGGTGAGCACGATTCTGATGGGCCTCCAAGCCTTCATGCTCGACTCGG
CGCCGACCTTGGGCAGCATCGAGACCTCCCTGGGGCAGAAGAAGAAGCTG
GCTGCGTCCAGCATGGCCTTCAACCTGACCAGCCCTCTCTTCGTGCAGAT
GTTCCCCGAGTAACATCCTCGTATGGCACTACGTCTTAAAAGGCGCTAAG
GGAAGCCCGTACGAAGGCGGCTACTACCATGGCAAACTTAAGTTTCCTCC
TGAATACCCACTAAAGCCGCCATCCATCATGATGCTGACTCCCTCTGGGC
GCTTCAAGCCTAACACACGTTTATGTCTGTCCATATGTACACAGGCTTGA
AAGTCATGGCAACAACCTTGTCCGCCAAGCGTTTGCGGAAGGAGCTCATT
GCTTTGCAGCGGGACCCCGTCGAAAATATCACGGCACGTCCTCTGGAAAG
ATCAGATGTATGCGGCTGGTAAGGGTGTCGGGGCTTGGACAGCCGGGAAA
GGTCTCTCGTGTTCAAATGGTAGAAGAGTGCAGGGGCCGCGACCTTGAGA
AGACGGAGGGATAGGTCTGACTTCCACCCAGAGACCTGGAACCCCATGTG
GTCGGTGAGCACGATTCTGATGGGCCTCCAAGCCTTCATGCTCGACTCGG
CGCCGACCTTGGGCAGCATCGAGACCTCCCTGGGGCAGAAGAAGAAGCTG
GCTGCGTCCAGCATGGCCTTCAACCTGACCAGCCCTCTCTTCGTGCAGAT
GTTCCCCGAGTAACATCCTCGTATGGCACTACGTCTTAAAAGGCGCTAAG
GGAAGCCCGTACGAAGGCGGCTACTACCATGGCAAACTTAAGTTTCCTCC
TGAATACCCACTAAAGCCGCCATCCATCATGATGCTGACTCCCTCTGGGC
GCTTCAAGCCTAACACACGTTTATGTCTGTCCATATGTACACAGGCTTGA
AAGTCATGGCAACAACCTTGTCCGCCAAGCGTTTGCGGAAGGAGCTCATT
GCTTTGCAGCGGGACCCCGTCGAAAATATCACGGCACGTCCTCTGGAAAG back to top
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