EWM21161.1, cds9509 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|585101231|gb|EWM21161.1| (ubiquitin-conjugating enzyme e2 j2 isoform 2 [Nannochloropsis gaditana]) HSP 1 Score: 410.994 bits (1055), Expect = 2.782e-145 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 Query: 1 MYTGLKVMATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVRVSGLGQPGKVSRVQMVEECRGRDLEKTEG 199 MYTGLKVMATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVRVSGLGQPGKVSRVQMVEECRGRDLEKTEG Sbjct: 1 MYTGLKVMATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVRVSGLGQPGKVSRVQMVEECRGRDLEKTEG 199
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|298715713|emb|CBJ28210.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 236.498 bits (602), Expect = 4.072e-75 Identity = 100/157 (63.69%), Postives = 132/157 (84.08%), Query Frame = 0 Query: 7 VMATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEI 163 MA+ ++ +RLRKEL+A++R+P++NI A P+++NIL WHYV+ G KGSPYEGG+YHGKLKFPPEYP+KPPS+MM+TP+GRF + RLCLSMSDFHPE+WNPMWSVSTILMGL +FMLD+A TLGS+ +S QKK+ A S+ N +P F ++FP++ Sbjct: 20 TMASDMATRRLRKELMAIKRNPIDNIVATPMDNNILEWHYVITGTKGSPYEGGHYHGKLKFPPEYPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLYSFMLDNAATLGSVTSSTAQKKRFATESLEVNCKNPAFRKLFPDL 176
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|675207859|ref|XP_008912814.1| (hypothetical protein PPTG_16980 [Phytophthora parasitica INRA-310] >gi|566012578|gb|ETI35489.1| hypothetical protein F443_18176 [Phytophthora parasitica P1569] >gi|567950018|gb|ETK75738.1| hypothetical protein L915_17695 [Phytophthora parasitica] >gi|567978693|gb|ETL29180.1| hypothetical protein L916_17583 [Phytophthora parasitica] >gi|568008173|gb|ETL82397.1| hypothetical protein L917_17428 [Phytophthora parasitica] >gi|568038090|gb|ETM35635.1| hypothetical protein L914_17488 [Phytophthora parasitica] >gi|568087035|gb|ETN01913.1| hypothetical protein PPTG_16980 [Phytophthora parasitica INRA-310] >gi|570316279|gb|ETO64227.1| hypothetical protein F444_18199 [Phytophthora parasitica P1976] >gi|570940065|gb|ETP05322.1| hypothetical protein F441_18041 [Phytophthora parasitica CJ01A1] >gi|570970331|gb|ETP33450.1| hypothetical protein F442_18016 [Phytophthora parasitica P10297] >gi|970634327|gb|KUF79616.1| Ubiquitin-conjugating enzyme E2 J2 [Phytophthora nicotianae]) HSP 1 Score: 233.032 bits (593), Expect = 1.342e-74 Identity = 103/163 (63.19%), Postives = 132/163 (80.98%), Query Frame = 0 Query: 8 MATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVR 170 MA+ ++ KRLRKE +A+QR PV+ I A PLE+NIL WHYV+ G KG+PYEGG+YHGKLKFPPEYP+KPPS+MM+TP+GRFK N RLCLSMSDFHPETWNPMWSVS+IL GL +FML++ TLGSI T+ QK+K A +S+ N T+ F ++FP++ ++ R Sbjct: 1 MASVMATKRLRKEYLAMQRKPVDYIQAVPLETNILEWHYVITGTKGTPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKYAVASLETNCTNATFRKLFPDLVALQEER 163
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|695410359|ref|XP_009525163.1| (hypothetical protein PHYSODRAFT_491377 [Phytophthora sojae] >gi|348682630|gb|EGZ22446.1| hypothetical protein PHYSODRAFT_491377 [Phytophthora sojae]) HSP 1 Score: 230.72 bits (587), Expect = 8.893e-74 Identity = 102/159 (64.15%), Postives = 130/159 (81.76%), Query Frame = 0 Query: 12 LSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVR 170 ++ KRLRKE +A+QR PV+ I A P+ESNIL WHYV+ G KG+PYEGG+YHGKLKFPPEYP+KPPS+MM+TP+GRFK N RLCLSMSDFHPETWNPMWSVS+IL GL +FML++ TLGSI T+ QK+K AA+S+ N T+ F ++FP++ ++ R Sbjct: 1 MATKRLRKEYLAMQRKPVDYIQAVPVESNILEWHYVITGTKGTPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKYAAASLETNCTNATFRRLFPDLVALQEER 159
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|301109287|ref|XP_002903724.1| (ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4] >gi|262096727|gb|EEY54779.1| ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4]) HSP 1 Score: 230.335 bits (586), Expect = 1.289e-73 Identity = 102/159 (64.15%), Postives = 130/159 (81.76%), Query Frame = 0 Query: 12 LSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVR 170 ++ KRLRKE +A+QR PV+ I A PLE+NIL WHYV+ G KG+PYEGG+YHGKLKFPPEYP+KPPS+MM+TP+GRFK N RLCLSMSDFHPETWNPMWSVS+IL GL +FML++ TLGSI T+ QK+K AA+S+ N T+ F ++FP++ ++ R Sbjct: 1 MATKRLRKEYLAMQRKPVDYIQAVPLETNILEWHYVITGTKGTPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKYAAASLESNCTNATFRKLFPDLVALQEER 159
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|635372266|emb|CCI39487.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 229.95 bits (585), Expect = 3.143e-73 Identity = 103/156 (66.03%), Postives = 127/156 (81.41%), Query Frame = 0 Query: 8 MATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEI 163 MA+ L+ KRLRKE +A+QR +ENI A PL SNIL WHYV+ G S YEGG+YHG L+FPPEYP+KPPS++MLTP+GRFK N RLCLSMSDFHPETWNPMWSVS+IL GL +FML+S TLGSI TS QK++ AA+S+ FN +SP+F ++FP + Sbjct: 1 MASFLATKRLRKEYMAIQRKSIENIVAAPLHSNILEWHYVIIGTNDSCYEGGFYHGILRFPPEYPMKPPSVLMLTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLESQSTLGSIVTSEAQKRRYAANSLEFNCSSPVFRKLFPNL 156
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|325183119|emb|CCA17577.1| (ubiquitinconjugating enzyme E2 putative [Albugo laibachii Nc14]) HSP 1 Score: 229.95 bits (585), Expect = 3.546e-73 Identity = 103/156 (66.03%), Postives = 128/156 (82.05%), Query Frame = 0 Query: 8 MATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEI 163 MA+ L+ KRLRKE IA+QR +ENI A PL SNIL WHYV+ G S YEGGYYHG L+FPPEYP+KPPS++MLTP+GRFK N RLCLSMSDFHPETWNPMWSVS+IL GL +FML++ TLGSI TS QK++ AA+S+ +N +SP+F ++FP++ Sbjct: 1 MASFLATKRLRKEYIAIQRKSIENIVAAPLHSNILEWHYVIVGTSESCYEGGYYHGILRFPPEYPMKPPSVLMLTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQSTLGSIVTSEAQKRRYAAASLEYNCSSPVFRKLFPDL 156
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|1214698096|gb|OWZ11199.1| (Ubiquitin-conjugating enzyme E2 [Phytophthora megakarya]) HSP 1 Score: 227.639 bits (579), Expect = 1.382e-72 Identity = 100/159 (62.89%), Postives = 130/159 (81.76%), Query Frame = 0 Query: 12 LSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVR 170 ++ KRLRKE +++QR PVE I A P+E+NIL WHYV+ G KG+PYEGG+YHGKLKFPPEYP+KPPS+MM+TP+GRFK N RLCLSMSDFHPETWNPMWSVS+IL GL +FML++ TLGSI T+ QK+K AA+S+ N ++ F ++FP++ ++ R Sbjct: 1 MATKRLRKEYLSMQRKPVEYIQAVPVETNILEWHYVITGTKGTPYEGGFYHGKLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKYAAASLETNCSNATFRKLFPDLVTLQEER 159
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|953492125|emb|CEG45375.1| (ubiquitin-conjugating enzyme e2 [Plasmopara halstedii]) HSP 1 Score: 226.868 bits (577), Expect = 3.571e-72 Identity = 99/159 (62.26%), Postives = 130/159 (81.76%), Query Frame = 0 Query: 12 LSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEIRCMRLVR 170 ++ KRLRKE +++QR PV+ I A PLE+NIL WHYV+ G KG+PYEGG+YHG+LKFPPEYP+KPPS+MM+TP+GRFK N RLCLSMSDFHPETWNPMWSVS+IL GL +FML++ TLGS+ T+ GQK+K AA+S+ N + F ++FP++ ++ R Sbjct: 1 MATKRLRKEYLSMQRKPVDYIQAVPLETNILEWHYVITGTKGTPYEGGFYHGRLKFPPEYPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSMSTTDGQKRKYAATSLETNCANATFRKLFPDLVALQAER 159
BLAST of EWM21161.1 vs. NCBI_GenBank
Match: gi|676380067|ref|XP_009033312.1| (hypothetical protein AURANDRAFT_20698, partial [Aureococcus anophagefferens] >gi|323456375|gb|EGB12242.1| hypothetical protein AURANDRAFT_20698, partial [Aureococcus anophagefferens]) HSP 1 Score: 220.705 bits (561), Expect = 1.227e-70 Identity = 97/156 (62.18%), Postives = 125/156 (80.13%), Query Frame = 0 Query: 8 MATTLSAKRLRKELIALQRDPVENITARPLESNILVWHYVLKGAKGSPYEGGYYHGKLKFPPEYPLKPPSIMMLTPSGRFKPNTRLCLSMSDFHPETWNPMWSVSTILMGLQAFMLDSAPTLGSIETSLGQKKKLAASSMAFNLTSPLFVQMFPEI 163 MA+ L+ +RL +E A+++ P +NI ARPLESN+L WHYV+ G K S YEGG+YHGKLKFP EYPL+PPS++M TPSGRFK N RLCLSMSDFHPE+WNPMWSVSTIL GL +FML+S+PTLGS+E + Q+++ AA S+ FN + F +FP++ Sbjct: 1 MASDLATRRLLREFAAMRKAPPDNIVARPLESNVLEWHYVITGTKDSVYEGGHYHGKLKFPTEYPLRPPSVLMCTPSGRFKTNCRLCLSMSDFHPESWNPMWSVSTILTGLYSFMLESSPTLGSVEATPAQRRRFAAQSLEFNCANETFRGLFPDL 156 The following BLAST results are available for this feature:
BLAST of EWM21161.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|