rna9512, rna9512 (mRNA) Nannochloropsis gaditana

Overview
Namerna9512
Unique Namerna9512
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1154
Alignment locationKK037254.1:30300..32067 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100474g4.5243.mrna
Orig protein idgnl|cribi|Naga_100474g4.5243
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:30300..32067 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100474g4gene9233Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9512rna9512-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21193.1cds9481Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9512 ID=rna9512|Name=rna9512|organism=Nannochloropsis gaditana|type=mRNA|length=1154bp
GAGTGACAGAGAGGGGGCCTCATATATTCTTCAGACAGTCGCAGGCATGA
AACCGTACATCTCACGCCGTTAGACTCTGCTTTCTACGTCTAACTTTCTA
TGGCTTTCTTACATCTTCAAGGGAGGAAGGCGCTATGGCTGGTGCTAAAG
ATGAGGACGATGAGAAGCGGGAGGACTGGTTTGAGGTCATGGGGTTATCG
TGGGATGCTACAGCAGAGGAAGTCAAGGACGCTTACAAGAAGCTTGCCCT
CAAGTACCACCCGGACAAAAACCGTGGGGATCCAAAGGCTGCCGACCGAT
TCATGCTGGTGACAAAGGCGAAGAGCTTCCTTTCCGACGAGGGAAAACGA
AGACGGTTGTCGGAAAAGAAACATCGGGAAGCAGCCCGGGAACAACGGCA
TACGCAACGTTTCAAGGAGATGGACGCGCAGCGAAAGCGGTTCAAAGGGG
ATCTCGAAGCCAGGGAGGCCAAAGAACGGGAAGCATCCCGACGGCAGCGG
CCCGGCGGGGGTGGGAGAGGGCCCGGGCAAGGCGCGGGGGAGAGGGAGGG
CGGTGGGATCAACGCGCATGTCCTGGACGAGCTCCGTCGTATGGGCCAGG
CCCAGCGGGAAGCGGAAGCGCGAAGGATGGAGGAACTTTTGCACAAGAGC
AACGCCGCGGCAGAGGCGGCCATGGCGCGGCGGGCGGCGGAAGGAGGGCA
GGGGCCGGGGGAGGCAGGGAAGGAGGGGGAGGGGGAGGGGGAAGGGGAAG
GAAAGAGGGAAGAGAGGGAGGTGGGCGAAGGTCTGAAGGGTGCGCCCTCC
GGGGTTTCCACGCGCACGATGGGCGCTTCGACAGAAGTCCGTGTGAAATG
GAAACGGAGCCAGCTTGAGGAGTCGTTCTCGGACGAAAGCCTTTACCAGC
TCTTGGTCCGGTATGGGCCGATCAAGGCGGTGGAGATGACAGGGGTGAAG
GGAAACACTGCCAAGGTCGTCTTTGAGGAACGCAGCGGGGCAGAGCGGGC
AGTGGCTGCTTACGAGTTTGATGCGGGCATGCGTCTGACCATTCCCGCCG
ACAAGAAATACCGATTTGTGCATACATCGCACATGTACAGTGCGCCAGCA
TTGGTCAGCCGCAAAGCAACGAAAAAGCACCCATGTCAACACCTGCGTGC
ATAA
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protein sequence of rna9512

>rna9512-protein ID=rna9512-protein|Name=rna9512|organism=Nannochloropsis gaditana|type=polypeptide|length=238bp
MKTAFFGLPAAALLFLGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFK
NFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYL
GIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKKVGRCILGQSTV
VGTIDFTDLVTDCVEITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMAP
FLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVPTA
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mRNA from alignment at KK037254.1:30300..32067+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9512 ID=rna9512|Name=rna9512|organism=Nannochloropsis gaditana|type=mRNA|length=1768bp|location=Sequence derived from alignment at KK037254.1:30300..32067+ (Nannochloropsis gaditana)
AGGGCGCTTTGTGGTTTCGACAATACTTCCTCGGCGGCAATCGCAAGCCG
GTTGTATAGGCTTTGACCCGATGCTACCATGACGTAGGTAGGTAAGTTGC
CTTCACACTGTCAGCGAATGGGACTCGAGTGGATCTTTTACTTGACGGGT
ACTCGCTGGGCGCGACCGCCGAGCACGAACCGATCGTGATCAAAGATCAT
AGAAATGGCTTCCAGAGGGTTTTTGAGAGATGGTCATATCTGCGTATGCA
AAGGTAATGCGTACCAAGAATACTTGGGGCAATTTGGGAAGGCAAGATAA
TGACGTGAAACAGACTAGGATAGCGTTCGTTGATCTTGCTCCTGTGCTGA
ATTCTAAGCACTATCATTCGTGTATCGTCTGGCCATGTCAATAATCTTTC
CCGAAAATAATTCAGCGCTTTGCAGACTGTGGTAATTCAATCATGAAAAC
GGCTTTCTTTGGGTTGCCAGCAGCCGCTTTGTTGTTTTTGGGGACGATGC
CCCaagccttctccgccttcgtCAGCTCTGACGTCTATGCCAATAATGAC
CTCACTGGGGACGAGCGAGTCTGTAAAAACAGGCAATTCAAGAATTTTTT
AAAGTGTGCTCATGCTGAAAAGGGCAATGCGAGTACATGGCCCgatcttt
cttcttgtcaaTCCCTGTTAGGGGATTGTCGTGGCTGGGCCTATGATGGA
GTCAACGATGGAGCCATCACAGGAAATACGGAGGCGTACCTAGGGATCGC
TGGCATTTCCAAGAACGCCAGGTACTTCGGGTATTATGCATACGGTAACG
CGGACCCGAAGAAATGTAAGTACCCCCGTCATCTAGTATTCTCCTCGTCT
TATAGCTCACCGCACCTGACGAGCTCGCGCATGCCCTATGTCCATGCCAG
ACGTGCCGTTTGATTGCAACTATGTCTCCAGGCTCTACAAAAAGGTACGT
GCAGAGAGTGTTCCACCGTTTACGCGTGTGGGCTGGCTTTTTGGTCTGCA
TCCTTCCTACTCTTCTACACGTAAATGTTTCGACATCAAGCTGCAGCATT
GTCTTCTCACATATTATGACGTGATTGCTATCTGTGCAAATGGCTACACT
CAGGTCGGGCGCTGTATACTGGGTCAATCGACCGTGGTGGGTACCATTGA
CTTTACTGACTTGGTGACTGACTGTGTGGAGATCACCTTATCCCGAGCCG
AGGCCGCGTTTGTCTTCTCTCAGACCAACTTTGCCTTTGGTATGCCGGTG
CCTGTCGGCGTGGTGAAGTACTTTTATATGGCTCCCTTCTTGAGGTTGAG
TGACGACATAAATTACGAGAATTGCCCCATTTTGGAGGGCCATTTTAAGA
AGGGCTCCCCCATCGTGCGCGCATCGAAGGGCGGTGCGGTTCCGACGGCG
TAGTTGCTGCGTATCGTTACCCCTCCTAGCGTGCACTTCCAGTTTGTCTG
TCCCATATGCATGGGCCTTGGTCTCTGGTATTAGCTGCAGGTATTCAGCT
GTTTGCGCTGTAGTAAATTGTGCTTCTTGGATGACGGGCGGACCGAATGT
GAAATTTAGTTGCTAGCCAGGGGGTTATTGCATGTGCGAGTTTTTAGTGA
ACGTCTTTCCAAGAAGCATTCAAAGCAAGATGACTGGAGAGTCATTATTT
TTGATATCTTTGCACCAGGAAGCAGGTGGGATCTGGTGTGCTGTAGAGAG
ATGTGAATGAAGCGAAAAATAGAGAGCCAACAACGAAGCTACAATTAAAT
TAGATTCGTCCAACCGGT
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Coding sequence (CDS) from alignment at KK037254.1:30300..32067+

>rna9512 ID=rna9512|Name=rna9512|organism=Nannochloropsis gaditana|type=CDS|length=2151bp|location=Sequence derived from alignment at KK037254.1:30300..32067+ (Nannochloropsis gaditana)
ATGAAAACGGCTTTCTTTGGGTTGCCAGCAGCCGCTTTGTTGTTTTTGGG
GACGATGCCCCaagccttctccgccttcgtCAGCTCTGACGTCTATGCCA
ATAATGACCTCACTGGGGACGAGCGAGTCTGTAAAAACAGGCAATTCAAG
AATTTTTTAAAGTGTGCTCATGCTGAAAAGGGCAATGCGAGTACATGGCC
CgatctttcttcttgtcaaTCCCTGTTAGGGGATTGTCGTGGCTGGGCCT
ATGATGGAGTCAACGATGGAGCCATCACAGGAAATACGGAGGCGTACCTA
GGGATCGCTGGCATTTCCAAGAACGCCAGGTACTTCGGGTATTATGCATA
CGGTAACGCGGACCCGAAGAAATACGTGCCGTTTGATTGCAACTATGTCT
CCAGGCTCTACAAAAAGGTCGGGCGCTGTATACTGGGTCAATCGACCGTG
GTGGGTACCATTGACTTTACTGACTTGGTGACTGACTGTGTGGAGATCAC
CTTATCCCGAGCCGAGGCCGCGTTTGTCTTCTCTCAGACCAACTTTGCCT
TTGGTATGCCGGTGCCTGTCGGCGTGGTGAAGTACTTTTATATGGCTCCC
TTCTTGAGGTTGAGTGACGACATAAATTACGAGAATTGCCCCATTTTGGA
GGGCCATTTTAAGAAGGGCTCCCCCATCGTGCGCGCATCGAAGGGCGGTG
CGGTTCCGACGGCGTAGATGAAAACGGCTTTCTTTGGGTTGCCAGCAGCC
GCTTTGTTGTTTTTGGGGACGATGCCCCaagccttctccgccttcgtCAG
CTCTGACGTCTATGCCAATAATGACCTCACTGGGGACGAGCGAGTCTGTA
AAAACAGGCAATTCAAGAATTTTTTAAAGTGTGCTCATGCTGAAAAGGGC
AATGCGAGTACATGGCCCgatctttcttcttgtcaaTCCCTGTTAGGGGA
TTGTCGTGGCTGGGCCTATGATGGAGTCAACGATGGAGCCATCACAGGAA
ATACGGAGGCGTACCTAGGGATCGCTGGCATTTCCAAGAACGCCAGGTAC
TTCGGGTATTATGCATACGGTAACGCGGACCCGAAGAAATACGTGCCGTT
TGATTGCAACTATGTCTCCAGGCTCTACAAAAAGGTCGGGCGCTGTATAC
TGGGTCAATCGACCGTGGTGGGTACCATTGACTTTACTGACTTGGTGACT
GACTGTGTGGAGATCACCTTATCCCGAGCCGAGGCCGCGTTTGTCTTCTC
TCAGACCAACTTTGCCTTTGGTATGCCGGTGCCTGTCGGCGTGGTGAAGT
ACTTTTATATGGCTCCCTTCTTGAGGTTGAGTGACGACATAAATTACGAG
AATTGCCCCATTTTGGAGGGCCATTTTAAGAAGGGCTCCCCCATCGTGCG
CGCATCGAAGGGCGGTGCGGTTCCGACGGCGTAGATGAAAACGGCTTTCT
TTGGGTTGCCAGCAGCCGCTTTGTTGTTTTTGGGGACGATGCCCCaagcc
ttctccgccttcgtCAGCTCTGACGTCTATGCCAATAATGACCTCACTGG
GGACGAGCGAGTCTGTAAAAACAGGCAATTCAAGAATTTTTTAAAGTGTG
CTCATGCTGAAAAGGGCAATGCGAGTACATGGCCCgatctttcttcttgt
caaTCCCTGTTAGGGGATTGTCGTGGCTGGGCCTATGATGGAGTCAACGA
TGGAGCCATCACAGGAAATACGGAGGCGTACCTAGGGATCGCTGGCATTT
CCAAGAACGCCAGGTACTTCGGGTATTATGCATACGGTAACGCGGACCCG
AAGAAATACGTGCCGTTTGATTGCAACTATGTCTCCAGGCTCTACAAAAA
GGTCGGGCGCTGTATACTGGGTCAATCGACCGTGGTGGGTACCATTGACT
TTACTGACTTGGTGACTGACTGTGTGGAGATCACCTTATCCCGAGCCGAG
GCCGCGTTTGTCTTCTCTCAGACCAACTTTGCCTTTGGTATGCCGGTGCC
TGTCGGCGTGGTGAAGTACTTTTATATGGCTCCCTTCTTGAGGTTGAGTG
ACGACATAAATTACGAGAATTGCCCCATTTTGGAGGGCCATTTTAAGAAG
GGCTCCCCCATCGTGCGCGCATCGAAGGGCGGTGCGGTTCCGACGGCGTA
G
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Synonyms
Publications