EWM21211.1, cds9460 (CDS) Nannochloropsis gaditana

Overview
NameEWM21211.1
Unique Namecds9460
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:418062..418826 +
Alignment locationKK037253.1:419078..419533 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21211.1
Productnudix
Orig transcript idgnl|cribi|Naga_100429g3.5113.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:418062..418826 +
KK037253.1supercontigKK037253.1:419078..419533 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
Homology
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|585101312|gb|EWM21211.1| (nudix [Nannochloropsis gaditana])

HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0
Query:    1 MSVSPPHTAKTDCSMRANTGCCIFSLLHHILGVLLLALLFITATMATSPTLRRAKSCTSWSRSFFPPVKAPAMGFMAANGGMARRYWTTKGLGVGRRLLMWSDASTSGFSGAGSTANNEKRNAGSIQGPAEAGDEVFRTGLPPLHWPSPDAETVSGNRGADQSSAPAPTVNLGKNNKRKGAASLPPIKGALPNKSKSTGPPASNVNTGTGEGAYAGDVSRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA 406
            MSVSPPHTAKTDCSMRANTGCCIFSLLHHILGVLLLALLFITATMATSPTLRRAKSCTSWSRSFFPPVKAPAMGFMAANGGMARRYWTTKGLGVGRRLLMWSDASTSGFSGAGSTANNEKRNAGSIQGPAEAGDEVFRTGLPPLHWPSPDAETVSGNRGADQSSAPAPTVNLGKNNKRKGAASLPPIKGALPNKSKSTGPPASNVNTGTGEGAYAGDVSRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA
Sbjct:    1 MSVSPPHTAKTDCSMRANTGCCIFSLLHHILGVLLLALLFITATMATSPTLRRAKSCTSWSRSFFPPVKAPAMGFMAANGGMARRYWTTKGLGVGRRLLMWSDASTSGFSGAGSTANNEKRNAGSIQGPAEAGDEVFRTGLPPLHWPSPDAETVSGNRGADQSSAPAPTVNLGKNNKRKGAASLPPIKGALPNKSKSTGPPASNVNTGTGEGAYAGDVSRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA 406          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|553181763|ref|XP_005853620.1| (hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526] >gi|422295440|gb|EKU22739.1| hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 307.76 bits (787), Expect = 1.141e-100
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0
Query:  255 KTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA 406
            +TTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARG LFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINI+FDLVRLEA
Sbjct:   85 ETTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGFLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIEFDLVRLEA 236          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|585103480|gb|EWM22841.1| (nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 128.257 bits (321), Expect = 1.175e-29
Identity = 83/186 (44.62%), Postives = 107/186 (57.53%), Query Frame = 0
Query:  219 SRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRL 404
            S GS +  E+  IN YP+  RAAV + +  +         Y  V+RSKEPG  +W+LPGGSVE+GEE L AAARE  EET+L    L+FYP    TTDAIY  + GA  V +H+VI+H   W    A     A DDA ++ + TL +L+ +  E +  G V  VV  VERLV  G I    DLVR+
Sbjct:  181 SPGSVAPPEQPIINQYPVFPRAAVNIVV-VRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGA--VKYHFVISHMVCWAAPEAA--PVAADDAKDIRWMTLPQLRTLDPEAIFRGVVE-VVETVERLVDVGCIT-KADLVRV 359          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|873218398|emb|CEM39482.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 114.39 bits (285), Expect = 2.725e-25
Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 0
Query:  225 SREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVIN 396
            +RE ++   YP +ARAAV+V +  +     +   Y +++R KEP KGKWSLPGG ++LGE TL AAARE +EET+L+  D++ YP +  ++DAI    D      +HY+I+    W +  A  + R  DDA E  + T   L  +   G++   V   + R E+L   G ++
Sbjct:   48 ARESLTKGMYPSYARAAVSVAVCKETGVVGRRPEYLLIRRGKEPSKGKWSLPGGKIDLGETTLEAAARELKEETALNSTDVKLYPDSFYSSDAIC--FDSRHRCKYHYLISTFYGWASRDA--KPRPMDDALEAAWFTKAALDDLHKHGMVDEAVIHAIERGEKLRQSGCLD 215          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|1072237566|gb|OEU22293.1| (hypothetical protein FRACYDRAFT_179351 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 100.523 bits (249), Expect = 1.520e-21
Identity = 61/167 (36.53%), Postives = 91/167 (54.49%), Query Frame = 0
Query:  236 LHARAAVAVTIA-TKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARA---GDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINID 398
            ++ RAAVA T+  T P+       Y +VKR   P + KWS+PGG +ELGEETL AA RE  EET +   D  ++ ++  TTD+I   E  +    FHYVI H  A I   + + + A    DDA +  + +LEE+K++     L   V +V+ + E L   G++ + 
Sbjct:    2 IYPRAAVAATVQWTNPNT--NLYHYLLVKRKNPPAQNKWSIPGGKIELGEETLTAAKREIEEETQI--RDCLWHSNSFLTTDSIVLDEMNSSSYAFHYVIAHCFAKIPPTSENESPALTPSDDALDAKWLSLEEIKSLECSEHLSKGVIEVITKAEALSTLGILPVQ 164          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|551669247|ref|XP_005837382.1| (hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712] >gi|428181539|gb|EKX50402.1| hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712])

HSP 1 Score: 99.3673 bits (246), Expect = 1.751e-20
Identity = 73/178 (41.01%), Postives = 97/178 (54.49%), Query Frame = 0
Query:  223 SSSREEISINAYPLHARAAVAVT-IATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGV-LFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINID 398
            S +R E    A  +  R+AVAV      PS     T + ++KR K P  G+WSLPGGSVELGE T+ AA RE  EET LS  D++F+  +  T+DAI +  D    V LFHYVI    A I   A  +  AGDDA ++ + T E+++  S  G +   V  VV R E L   G + +D
Sbjct:   66 SQNRIEPESQAENMKPRSAVAVAGCRLLPSG---ETEWLLIKRGKPPSYGEWSLPGGSVELGESTIAAARRELCEETRLSSNDVKFFEDSFMTSDAIVK--DARSDVTLFHYVIAQLFAEIKPEA--QVVAGDDALDVGWFTKEKIRESSF-GAVSPGVLRVVERAEELRRAGCLKLD 235          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|676378587|ref|XP_009032572.1| (hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens] >gi|323457090|gb|EGB12956.1| hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens])

HSP 1 Score: 96.2857 bits (238), Expect = 8.881e-20
Identity = 70/175 (40.00%), Postives = 95/175 (54.29%), Query Frame = 0
Query:  222 SSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITH------------------QAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGN 378
            SSSSRE      Y L  RAAVAVT+  +P++      YC+++R K PG+G+WS+PGG++ELGEETL  A RE  EET L ++ + ++     T+DAIYR +DG   V FHY+I                     A W T    D A AG D A   ++ L   +A+   GLL G+
Sbjct:   29 SSSSRE------YALTPRAAVAVTV-RRPTS---PPSYCLIQRGKPPGEGRWSIPGGALELGEETLAGARRELAEETGL-RDGVSWHGAPFTTSDAIYRDDDGR--VRFHYLIAQCFCEAAPTAALAAGDDALDAKWFTLD--DVANAGGDVAGNCWRILARAEALFAAGLLPGD 188          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|224000990|ref|XP_002290167.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973589|gb|EED91919.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 95.5153 bits (236), Expect = 2.859e-19
Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 0
Query:  239 RAAVAVTIATKPSA-----FEKTT-RYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKED------LRFYPHA-VCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVIN 396
            RAAV+V +   PS        KT+ +Y +V+R K P KG WSLPGG +E+GE TL AA RE  EET LS         L++YPH     +D+I+  +D   GV FHYVI+   A I      +  A DDA +  + +  E++    +G +   V  VV R E L + G++ 
Sbjct:   39 RAAVSVVVRCAPSPSSTSDINKTSPKYLLVQRGKAPNKGMWSLPGGKIEVGEGTLDAAKRELWEETGLSTGHEPKAGVLKWYPHGPFACSDSIHHTKDS--GVSFHYVISQCFAVIEVPIPPKVEASDDAMDARWWSSSEMRRGEDDGAVTKGVLRVVERSEVLYSSGLLE 207          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|955173590|emb|CUG73042.1| (Hypothetical protein, putative [Bodo saltans])

HSP 1 Score: 93.5893 bits (231), Expect = 6.574e-17
Identity = 61/148 (41.22%), Postives = 80/148 (54.05%), Query Frame = 0
Query:  256 TTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKE----DLRFYPHAVCTTDAIYRREDG-----------ARGVLFHYVITHQAAWI-TTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVE 387
            TT Y +V+R K P KG W  PGGSVE GE +L AA RE +EET L  +     L      V T+D I   E+             R V  H+V+ H AA +   G++   +AGDDAA + +K+ EE+ AM+ EGL V  V DV+  VE
Sbjct:  456 TTEYLLVQRGKAPSKGLWGCPGGSVEWGEGSLAAAVRELKEETGLEVDGQSLSLPLGRSPVHTSDVIVPSEEQQANNLANEQEPVRPVEHHFVLMHFAAQLHQEGSLATLKAGDDAAAVAWKSKEEITAMTSEGLCVAGVLDVISAVE 603          
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|1056095585|ref|WP_067619389.1| (hypothetical protein [Dissulfuribacter thermophilus])

HSP 1 Score: 83.1889 bits (204), Expect = 1.568e-15
Identity = 55/143 (38.46%), Postives = 73/143 (51.05%), Query Frame = 0
Query:  230 SINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLE 372
            SI+ YP + R AV+  +        K  R  +VKR   P KG W+ PGGSV+LGE    A  RE  EET ++   +R   H     DAIY+  DG   + +HYVI +  A   +G       GDDA +  + TLEEL  M +E
Sbjct:    6 SIHKYPDYPRVAVSCVVW-------KGDRVLMVKRKNPPAKGTWAPPGGSVKLGETCFDAVKREVLEETGINVSPIRTMTHV----DAIYK--DGDSAIRYHYVILYIEAKYISGT---PVPGDDAEDAGWFTLEELSNMKVE 132          
The following BLAST results are available for this feature:
BLAST of EWM21211.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101312|gb|EWM21211.1|0.000e+0100.00nudix [Nannochloropsis gaditana][more]
gi|553181763|ref|XP_005853620.1|1.141e-10098.03hypothetical protein NGA_0502900, partial [Nannoch... [more]
gi|585103480|gb|EWM22841.1|1.175e-2944.62nudix hydrolase [Nannochloropsis gaditana][more]
gi|873218398|emb|CEM39482.1|2.725e-2536.63unnamed protein product [Vitrella brassicaformis C... [more]
gi|1072237566|gb|OEU22293.1|1.520e-2136.53hypothetical protein FRACYDRAFT_179351 [Fragilario... [more]
gi|551669247|ref|XP_005837382.1|1.751e-2041.01hypothetical protein GUITHDRAFT_151143 [Guillardia... [more]
gi|676378587|ref|XP_009032572.1|8.881e-2040.00hypothetical protein AURANDRAFT_60840 [Aureococcus... [more]
gi|224000990|ref|XP_002290167.1|2.859e-1938.01predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|955173590|emb|CUG73042.1|6.574e-1741.22Hypothetical protein, putative [Bodo saltans][more]
gi|1056095585|ref|WP_067619389.1|1.568e-1538.46hypothetical protein [Dissulfuribacter thermophilu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9491rna9491Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications