EWM21211.1, cds9460 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|585101312|gb|EWM21211.1| (nudix [Nannochloropsis gaditana]) HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0 Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0
Query: 1 MSVSPPHTAKTDCSMRANTGCCIFSLLHHILGVLLLALLFITATMATSPTLRRAKSCTSWSRSFFPPVKAPAMGFMAANGGMARRYWTTKGLGVGRRLLMWSDASTSGFSGAGSTANNEKRNAGSIQGPAEAGDEVFRTGLPPLHWPSPDAETVSGNRGADQSSAPAPTVNLGKNNKRKGAASLPPIKGALPNKSKSTGPPASNVNTGTGEGAYAGDVSRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA 406
MSVSPPHTAKTDCSMRANTGCCIFSLLHHILGVLLLALLFITATMATSPTLRRAKSCTSWSRSFFPPVKAPAMGFMAANGGMARRYWTTKGLGVGRRLLMWSDASTSGFSGAGSTANNEKRNAGSIQGPAEAGDEVFRTGLPPLHWPSPDAETVSGNRGADQSSAPAPTVNLGKNNKRKGAASLPPIKGALPNKSKSTGPPASNVNTGTGEGAYAGDVSRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA
Sbjct: 1 MSVSPPHTAKTDCSMRANTGCCIFSLLHHILGVLLLALLFITATMATSPTLRRAKSCTSWSRSFFPPVKAPAMGFMAANGGMARRYWTTKGLGVGRRLLMWSDASTSGFSGAGSTANNEKRNAGSIQGPAEAGDEVFRTGLPPLHWPSPDAETVSGNRGADQSSAPAPTVNLGKNNKRKGAASLPPIKGALPNKSKSTGPPASNVNTGTGEGAYAGDVSRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA 406
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|553181763|ref|XP_005853620.1| (hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526] >gi|422295440|gb|EKU22739.1| hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 307.76 bits (787), Expect = 1.141e-100 Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0
Query: 255 KTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA 406
+TTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARG LFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINI+FDLVRLEA
Sbjct: 85 ETTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGFLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIEFDLVRLEA 236
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|585103480|gb|EWM22841.1| (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 128.257 bits (321), Expect = 1.175e-29 Identity = 83/186 (44.62%), Postives = 107/186 (57.53%), Query Frame = 0
Query: 219 SRGSSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRL 404
S GS + E+ IN YP+ RAAV + + + Y V+RSKEPG +W+LPGGSVE+GEE L AAARE EET+L L+FYP TTDAIY + GA V +H+VI+H W A A DDA ++ + TL +L+ + E + G V VV VERLV G I DLVR+
Sbjct: 181 SPGSVAPPEQPIINQYPVFPRAAVNIVV-VRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGA--VKYHFVISHMVCWAAPEAA--PVAADDAKDIRWMTLPQLRTLDPEAIFRGVVE-VVETVERLVDVGCIT-KADLVRV 359
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|873218398|emb|CEM39482.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 114.39 bits (285), Expect = 2.725e-25 Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 0
Query: 225 SREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVIN 396
+RE ++ YP +ARAAV+V + + + Y +++R KEP KGKWSLPGG ++LGE TL AAARE +EET+L+ D++ YP + ++DAI D +HY+I+ W + A + R DDA E + T L + G++ V + R E+L G ++
Sbjct: 48 ARESLTKGMYPSYARAAVSVAVCKETGVVGRRPEYLLIRRGKEPSKGKWSLPGGKIDLGETTLEAAARELKEETALNSTDVKLYPDSFYSSDAIC--FDSRHRCKYHYLISTFYGWASRDA--KPRPMDDALEAAWFTKAALDDLHKHGMVDEAVIHAIERGEKLRQSGCLD 215
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|1072237566|gb|OEU22293.1| (hypothetical protein FRACYDRAFT_179351 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 100.523 bits (249), Expect = 1.520e-21 Identity = 61/167 (36.53%), Postives = 91/167 (54.49%), Query Frame = 0
Query: 236 LHARAAVAVTIA-TKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARA---GDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINID 398
++ RAAVA T+ T P+ Y +VKR P + KWS+PGG +ELGEETL AA RE EET + D ++ ++ TTD+I E + FHYVI H A I + + + A DDA + + +LEE+K++ L V +V+ + E L G++ +
Sbjct: 2 IYPRAAVAATVQWTNPNT--NLYHYLLVKRKNPPAQNKWSIPGGKIELGEETLTAAKREIEEETQI--RDCLWHSNSFLTTDSIVLDEMNSSSYAFHYVIAHCFAKIPPTSENESPALTPSDDALDAKWLSLEEIKSLECSEHLSKGVIEVITKAEALSTLGILPVQ 164
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|551669247|ref|XP_005837382.1| (hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712] >gi|428181539|gb|EKX50402.1| hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712]) HSP 1 Score: 99.3673 bits (246), Expect = 1.751e-20 Identity = 73/178 (41.01%), Postives = 97/178 (54.49%), Query Frame = 0
Query: 223 SSSREEISINAYPLHARAAVAVT-IATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGV-LFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINID 398
S +R E A + R+AVAV PS T + ++KR K P G+WSLPGGSVELGE T+ AA RE EET LS D++F+ + T+DAI + D V LFHYVI A I A + AGDDA ++ + T E+++ S G + V VV R E L G + +D
Sbjct: 66 SQNRIEPESQAENMKPRSAVAVAGCRLLPSG---ETEWLLIKRGKPPSYGEWSLPGGSVELGESTIAAARRELCEETRLSSNDVKFFEDSFMTSDAIVK--DARSDVTLFHYVIAQLFAEIKPEA--QVVAGDDALDVGWFTKEKIRESSF-GAVSPGVLRVVERAEELRRAGCLKLD 235
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|676378587|ref|XP_009032572.1| (hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens] >gi|323457090|gb|EGB12956.1| hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens]) HSP 1 Score: 96.2857 bits (238), Expect = 8.881e-20 Identity = 70/175 (40.00%), Postives = 95/175 (54.29%), Query Frame = 0
Query: 222 SSSSREEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITH------------------QAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGN 378
SSSSRE Y L RAAVAVT+ +P++ YC+++R K PG+G+WS+PGG++ELGEETL A RE EET L ++ + ++ T+DAIYR +DG V FHY+I A W T D A AG D A ++ L +A+ GLL G+
Sbjct: 29 SSSSRE------YALTPRAAVAVTV-RRPTS---PPSYCLIQRGKPPGEGRWSIPGGALELGEETLAGARRELAEETGL-RDGVSWHGAPFTTSDAIYRDDDGR--VRFHYLIAQCFCEAAPTAALAAGDDALDAKWFTLD--DVANAGGDVAGNCWRILARAEALFAAGLLPGD 188
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|224000990|ref|XP_002290167.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973589|gb|EED91919.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 95.5153 bits (236), Expect = 2.859e-19 Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 0
Query: 239 RAAVAVTIATKPSA-----FEKTT-RYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKED------LRFYPHA-VCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVIN 396
RAAV+V + PS KT+ +Y +V+R K P KG WSLPGG +E+GE TL AA RE EET LS L++YPH +D+I+ +D GV FHYVI+ A I + A DDA + + + E++ +G + V VV R E L + G++
Sbjct: 39 RAAVSVVVRCAPSPSSTSDINKTSPKYLLVQRGKAPNKGMWSLPGGKIEVGEGTLDAAKRELWEETGLSTGHEPKAGVLKWYPHGPFACSDSIHHTKDS--GVSFHYVISQCFAVIEVPIPPKVEASDDAMDARWWSSSEMRRGEDDGAVTKGVLRVVERSEVLYSSGLLE 207
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|955173590|emb|CUG73042.1| (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 93.5893 bits (231), Expect = 6.574e-17 Identity = 61/148 (41.22%), Postives = 80/148 (54.05%), Query Frame = 0
Query: 256 TTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKE----DLRFYPHAVCTTDAIYRREDG-----------ARGVLFHYVITHQAAWI-TTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVE 387
TT Y +V+R K P KG W PGGSVE GE +L AA RE +EET L + L V T+D I E+ R V H+V+ H AA + G++ +AGDDAA + +K+ EE+ AM+ EGL V V DV+ VE
Sbjct: 456 TTEYLLVQRGKAPSKGLWGCPGGSVEWGEGSLAAAVRELKEETGLEVDGQSLSLPLGRSPVHTSDVIVPSEEQQANNLANEQEPVRPVEHHFVLMHFAAQLHQEGSLATLKAGDDAAAVAWKSKEEITAMTSEGLCVAGVLDVISAVE 603
BLAST of EWM21211.1 vs. NCBI_GenBank
Match: gi|1056095585|ref|WP_067619389.1| (hypothetical protein [Dissulfuribacter thermophilus]) HSP 1 Score: 83.1889 bits (204), Expect = 1.568e-15 Identity = 55/143 (38.46%), Postives = 73/143 (51.05%), Query Frame = 0
Query: 230 SINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLE 372
SI+ YP + R AV+ + K R +VKR P KG W+ PGGSV+LGE A RE EET ++ +R H DAIY+ DG + +HYVI + A +G GDDA + + TLEEL M +E
Sbjct: 6 SIHKYPDYPRVAVSCVVW-------KGDRVLMVKRKNPPAKGTWAPPGGSVKLGETCFDAVKREVLEETGINVSPIRTMTHV----DAIYK--DGDSAIRYHYVILYIEAKYISGT---PVPGDDAEDAGWFTLEELSNMKVE 132 The following BLAST results are available for this feature:
BLAST of EWM21211.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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