EWM21293.1, cds9379 (CDS) Nannochloropsis gaditana

Overview
NameEWM21293.1
Unique Namecds9379
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:200001..200337 -
Alignment locationKK037253.1:199786..199925 -
Alignment locationKK037253.1:199479..199649 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21293.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101345g1.7066.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:200001..200337 -
KK037253.1supercontigKK037253.1:199786..199925 -
KK037253.1supercontigKK037253.1:199479..199649 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM21293.1 vs. NCBI_GenBank
Match: gi|585101464|gb|EWM21293.1| (hypothetical protein Naga_101345g1 [Nannochloropsis gaditana])

HSP 1 Score: 429.483 bits (1103), Expect = 3.865e-152
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 
Query:    1 MNGGRHPRPSGVIAPDQDLNDIPEATVLSGPPTGGNSHASTSHQSTIPAAQMAYTIAQPTHPPSHPTAPSPMVMYPTQGGGYPPRQGPVVVDDSVMAQYLAQQGGSVPPPPPGGGSCDERRFITYQAQQSDAPSGAWRDHVIFYFLSSPPFAPPPSLPTVRLLYGRGQYLHAYLASRRTRALALLSIFTGSSLLIMYFLMSRRRGKAAGALGHDG 215
            MNGGRHPRPSGVIAPDQDLNDIPEATVLSGPPTGGNSHASTSHQSTIPAAQMAYTIAQPTHPPSHPTAPSPMVMYPTQGGGYPPRQGPVVVDDSVMAQYLAQQGGSVPPPPPGGGSCDERRFITYQAQQSDAPSGAWRDHVIFYFLSSPPFAPPPSLPTVRLLYGRGQYLHAYLASRRTRALALLSIFTGSSLLIMYFLMSRRRGKAAGALGHDG
Sbjct:    1 MNGGRHPRPSGVIAPDQDLNDIPEATVLSGPPTGGNSHASTSHQSTIPAAQMAYTIAQPTHPPSHPTAPSPMVMYPTQGGGYPPRQGPVVVDDSVMAQYLAQQGGSVPPPPPGGGSCDERRFITYQAQQSDAPSGAWRDHVIFYFLSSPPFAPPPSLPTVRLLYGRGQYLHAYLASRRTRALALLSIFTGSSLLIMYFLMSRRRGKAAGALGHDG 215
The following BLAST results are available for this feature:
BLAST of EWM21293.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101464|gb|EWM21293.1|3.865e-152100.00hypothetical protein Naga_101345g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9409rna9409Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications