rna9330, rna9330 (mRNA) Nannochloropsis gaditana

Overview
Namerna9330
Unique Namerna9330
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length354
Alignment locationKK037252.1:405003..406304 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101579g1.6625.mrna
Orig protein idgnl|cribi|Naga_101579g1.6625
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:405003..406304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101579g1gene9046Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9330rna9330-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21373.1cds9300Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9330 ID=rna9330|Name=rna9330|organism=Nannochloropsis gaditana|type=mRNA|length=354bp
ATGTCCACGGATAAGAGCGCTTTACCTGCCGATTACATTGCTGCGGACGA
GCTCTCTGCGGTCCTCCGCCTCGCAACGGCTACCATGGAGGAAAGCATAA
ATCCAGGCAACGGCGCACCGAACAAGACAGAAAATACTTACAAAGACCAA
GCGGGGCTCCCTCAACCGACTGGGGATGCAGACGGGGGCGAAGAAGGAGG
AATCAGCAAGAGAATGCTAAAAAAGATGGCAAAGGGCAAACTGAAGGAGA
AAAAGGAGAAAAAGCTTCCGAACCCTCCAAAGGCTAAGGAGGAAAAAAGT
GGAAAACCTGAGAAGGAGGAGGTTAAGAATGCAAATCGATCACGGGTCTT
GTAA
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protein sequence of rna9330

>rna9330-protein ID=rna9330-protein|Name=rna9330|organism=Nannochloropsis gaditana|type=polypeptide|length=293bp
MKTRDRDCNVGGVGSCCGKRTTSYAIPAKTFKSTKTKKLASLQLLLITGL
ILGLASMLWNRVRALQDPLRVVAPLPPSSSLAMSERPTPISSFPPPTTRT
KTVENESQNPATAILMVDTRDLFPPPEAGNPAFWYGYLTAANNRLYACKH
GYAFVFAHVTGPTFASPPTKESPVEGEMGENREEVEKYGRGCRGKEGMRA
APWCKVYVLARVLRRYLRVVFLDTDAMVANMSMPVEDWLTWGKTTPGGGG
KEGREEEEGEEPLYVSGDLPFRRLRVNTGGGGRRGGREGGREG
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mRNA from alignment at KK037252.1:405003..406304+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9330 ID=rna9330|Name=rna9330|organism=Nannochloropsis gaditana|type=mRNA|length=1302bp|location=Sequence derived from alignment at KK037252.1:405003..406304+ (Nannochloropsis gaditana)
AGTTCACCACCCCCCGAAAAAATAAATTTTGTCCCCATCCTCTGTTCACG
GCCCCTTTACACGACAATTCGCTTTTTTATTTAACATCCATGCCTGCCCT
TCTAGTACGCAAGGGAATTGAGAATGAAGACGAGAGACCGGGATTGTAAC
GTAGGCGGGGTAGGAAGTTGCTGTGGCAAGCGCACAACTTCCTACGCCAT
ACCGGCCAAAACATTCAAGAGCACAAAGACCAAAAAGCTTGCCTCCCTTC
AACTCCTGCTGATCACTGGTTTGATCCTGGGATTAGCCTCTATGCTGTGG
AATCGAGTCCGTGCGCTCCAAGATCCCTTGCGCGTTGTggcacccctccc
cccttcctcctccttggccatgTCTGAGAGGCCAACGCCCAtttcctcat
tccctccaccGACAACACGGACGAAAACTGTCGAAAATGAAAGTCAGAAT
CCAGCCACTGCTATCTTGATGGTGGATACCAGGGatttgtttcctcctcc
agaggcTGGGAACCCAGCCTTTTGGTAAGTGTGCTAGAAGCAGGactaag
ggagggaggcaaggggaaaagggggttCCAAGAAGAACGGCAAAAAAATC
AATTCATTGCCTGAGTCTCTTTCAAACCATGAAAGGGTGCCAAGtctccc
atcttccccccaaccctcccttcctccctcccttcctccctcccttcctc
cctcccttcctccctcccttccttcttccctccctccctcccttactcct
tccctcccgctcgccTCAACCGGACGTGAACAGTTgcctcaccctcttct
tctcctggcACCTTTTTTTTTAGGTACGGCTATCTGACTGCCGCCAATAA
CAGGCTGTATGCTTGCAAACATGGCTATGCCTTCGTCTTCGCACACGTCA
CGGGGCCCAcctttgcctcccccccgacaAAAGAAAGCCctgtggaaggg
gaaatggGGGAAAATCGGGAAGAAGTGGAGAAATATGGGAGAGGGTGTcg
tgggaaagaagggatgCGGGCTGCGCCCTGGTGCAAGGTGTACGTGCTGG
CCCGAGTGCTCCGACGCTACCTCCGGGTAGTTTTCCTGGACACGGACGCC
ATGGTGGCGAACATGAGCATGCCCGTGGAGGACTGGCTCACCTGGGGGAA
AACGacgcctggaggaggagggaaggaggggcgggaggaggaggaggggg
aggagccgcTGTATGTGTCGGGGGATTTGCCCTTTCGAAGGCTCCGGGTG
AAtacaggtgggggagggaggaggggagggagggagggagggagggaggg
ag
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Coding sequence (CDS) from alignment at KK037252.1:405003..406304+

>rna9330 ID=rna9330|Name=rna9330|organism=Nannochloropsis gaditana|type=CDS|length=1760bp|location=Sequence derived from alignment at KK037252.1:405003..406304+ (Nannochloropsis gaditana)
ATGAAGACGAGAGACCGGGATTGTAACGTAGGCGGGGTAGGAAGTTGCTG
TGGCAAGCGCACAACTTCCTACGCCATACCGGCCAAAACATTCAAGAGCA
CAAAGACCAAAAAGCTTGCCTCCCTTCAACTCCTGCTGATCACTGGTTTG
ATCCTGGGATTAGCCTCTATGCTGTGGAATCGAGTCCGTGCGCTCCAAGA
TCCCTTGCGCGTTGTggcacccctccccccttcctcctccttggccatgT
CTGAGAGGCCAACGCCCAtttcctcattccctccaccGACAACACGGACG
AAAACTGTCGAAAATGAAAGTCAGAATCCAGCCACTGCTATCTTGATGGT
GGATACCAGGGatttgtttcctcctccagaggcTGGGAACCCAGCCTTTT
GGTACGGCTATCTGACTGCCGCCAATAACAGGCTGTATGCTTGCAAACAT
GGCTATGCCTTCGTCTTCGCACACGTCACGGGGCCCAcctttgcctcccc
cccgacaAAAGAAAGCCctgtggaaggggaaatggGGGAAAATCGGGAAG
AAGTGGAGAAATATGGGAGAGGGTGTcgtgggaaagaagggatgCGGGCT
GCGCCCTGGTGCAAGGTGTACGTGCTGGCCCGAGTGCTCCGACGCTACCT
CCGGGTAGTTTTCCTGGACACGGACGCCATGGTGGCGAACATGAGCATGC
CCGTGGAGGACTGGCTCACCTGGGGGAAAACGacgcctggaggaggaggg
aaggaggggcgggaggaggaggagggggaggagccgcTGTATGTGTCGGG
GGATTTGCCCTTTCGAAGGCTCCGGGTGAAtacaggtgggggagggagga
ggggagggagggagggagggagggagggagATGAAGACGAGAGACCGGGA
TTGTAACGTAGGCGGGGTAGGAAGTTGCTGTGGCAAGCGCACAACTTCCT
ACGCCATACCGGCCAAAACATTCAAGAGCACAAAGACCAAAAAGCTTGCC
TCCCTTCAACTCCTGCTGATCACTGGTTTGATCCTGGGATTAGCCTCTAT
GCTGTGGAATCGAGTCCGTGCGCTCCAAGATCCCTTGCGCGTTGTggcac
ccctccccccttcctcctccttggccatgTCTGAGAGGCCAACGCCCAtt
tcctcattccctccaccGACAACACGGACGAAAACTGTCGAAAATGAAAG
TCAGAATCCAGCCACTGCTATCTTGATGGTGGATACCAGGGatttgtttc
ctcctccagaggcTGGGAACCCAGCCTTTTGGTACGGCTATCTGACTGCC
GCCAATAACAGGCTGTATGCTTGCAAACATGGCTATGCCTTCGTCTTCGC
ACACGTCACGGGGCCCAcctttgcctcccccccgacaAAAGAAAGCCctg
tggaaggggaaatggGGGAAAATCGGGAAGAAGTGGAGAAATATGGGAGA
GGGTGTcgtgggaaagaagggatgCGGGCTGCGCCCTGGTGCAAGGTGTA
CGTGCTGGCCCGAGTGCTCCGACGCTACCTCCGGGTAGTTTTCCTGGACA
CGGACGCCATGGTGGCGAACATGAGCATGCCCGTGGAGGACTGGCTCACC
TGGGGGAAAACGacgcctggaggaggagggaaggaggggcgggaggagga
ggagggggaggagccgcTGTATGTGTCGGGGGATTTGCCCTTTCGAAGGC
TCCGGGTGAAtacaggtgggggagggaggaggggagggagggagggaggg
agggagggag
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Synonyms
Publications