EWM21373.1, cds9300 (CDS) Nannochloropsis gaditana

Overview
NameEWM21373.1
Unique Namecds9300
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:405126..405526 +
Alignment locationKK037252.1:405826..406304 +

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Properties
Property NameValue
End range.
End range406304
Protein idEWM21373.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101579g1.6625.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:405126..405526 +
KK037252.1supercontigKK037252.1:405826..406304 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM21373.1 vs. NCBI_GenBank
Match: gi|585101577|gb|EWM21373.1| (hypothetical protein Naga_101579g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 
Query:    1 MKTRDRDCNVGGVGSCCGKRTTSYAIPAKTFKSTKTKKLASLQLLLITGLILGLASMLWNRVRALQDPLRVVAPLPPSSSLAMSERPTPISSFPPPTTRTKTVENESQNPATAILMVDTRDLFPPPEAGNPAFWYGYLTAANNRLYACKHGYAFVFAHVTGPTFASPPTKESPVEGEMGENREEVEKYGRGCRGKEGMRAAPWCKVYVLARVLRRYLRVVFLDTDAMVANMSMPVEDWLTWGKTTPGGGGKEGREEEEGEEPLYVSGDLPFRRLRVNTGGGGRRGGREGGREG 293
            MKTRDRDCNVGGVGSCCGKRTTSYAIPAKTFKSTKTKKLASLQLLLITGLILGLASMLWNRVRALQDPLRVVAPLPPSSSLAMSERPTPISSFPPPTTRTKTVENESQNPATAILMVDTRDLFPPPEAGNPAFWYGYLTAANNRLYACKHGYAFVFAHVTGPTFASPPTKESPVEGEMGENREEVEKYGRGCRGKEGMRAAPWCKVYVLARVLRRYLRVVFLDTDAMVANMSMPVEDWLTWGKTTPGGGGKEGREEEEGEEPLYVSGDLPFRRLRVNTGGGGRRGGREGGREG
Sbjct:    1 MKTRDRDCNVGGVGSCCGKRTTSYAIPAKTFKSTKTKKLASLQLLLITGLILGLASMLWNRVRALQDPLRVVAPLPPSSSLAMSERPTPISSFPPPTTRTKTVENESQNPATAILMVDTRDLFPPPEAGNPAFWYGYLTAANNRLYACKHGYAFVFAHVTGPTFASPPTKESPVEGEMGENREEVEKYGRGCRGKEGMRAAPWCKVYVLARVLRRYLRVVFLDTDAMVANMSMPVEDWLTWGKTTPGGGGKEGREEEEGEEPLYVSGDLPFRRLRVNTGGGGRRGGREGGREG 293
The following BLAST results are available for this feature:
BLAST of EWM21373.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101577|gb|EWM21373.1|0.000e+0100.00hypothetical protein Naga_101579g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9330rna9330Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications