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Properties
| Property Name | Value |
|---|
| Product | 3-dehydroquinate synthase |
| Orig transcript id | gnl|cribi|Naga_100424g3.4520.mrna |
| Orig protein id | gnl|cribi|Naga_100424g3.4520 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:390080..392569 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9324 ID=rna9324|Name=rna9324|organism=Nannochloropsis gaditana|type=mRNA|length=2004bp
ATGGATTCAGCGCAGAGGTCAACGAAAGGAGAGAAGAGCTCGCAGAACGA
ACGTGCCCGCAATCTCCGCATCCTTAAAACGCTGGGAAGGCATTTGTGGC
CTTCCACCAGTCTTCATCCCGATGCCGCCTCTCTCAAAGCCCGCGTCGTG
CTCTCCATGGGTCTTCTTGTTTCCTCTAAGCTCATCACCATCCAAGTCCC
CTTTTTGTTCAAGGACATCGTGGACAAATTGAACGTGCCTCCCGACGCAT
TCTTGACCGGGGCGGTCGCGCTCCCCCTATCCTTGCTGGTGGGCTATGGG
GTGGCACGAACAACGGCCACCGCTTTCCAAGAGCTCCGAAACGCCGTCTT
TGCCACCGTGGCCCAAAAAGCGATCCGGAAAGTGTCCCGGGATGCATTCG
TTCACTTGCACGACTTGGAGTTGGACTTTCATTTGAACCGGAGCACGGGG
GCGGTTTCTCGGGTGATAGACCGAGGCGGGCGGTCCATCAATTTTGTCCT
GTCTGCCCTGCTTTTCAACATCGTCCCCACCGCCTTGGAAATGGGTTTGG
TGGCCTACATCCTGTCGGTGCAATGCGGGTGGAAGCACGCGGGTGTGGCT
CTGGGCACGGTGGGTGCCTACACCGTCTTCACCATCCTTATCACCCAGTG
GCGGACCCAGTTTCGGAAGGACATGGTTAGGATCGAGAACGAGGCCTCCG
GGAAGGCGGTGGATTCCTTGTTGAACTACGAAACGGTCAAGTACTTCGGG
AACGAGGAGCACGAGGCGGACAGGTACGACCAGTCCCTCCGAGACTTCCA
GGAAGCAGGGTTGAAGACCCAAACCTCCCTCTCCCTTCTGAACGCGGGCC
AAAACGCGATTTTCTCCCTGGGGTTGTCGTCCATCATGGTCTTGACCGCC
CTCGACATCCAGGCCGGGCTGGCCTCGGTGGGCGACCTGGTGCTTGTCAA
CGGCTTGCTCTTCCAGCTGAGCATCCCTCTTTTTTTCATCGGGTCGATTT
ACCGGGAGGTGCGCCAGGCCCTGGTGGACATGGAAGCCATGTTCGACCTG
AAAGACCTGCAGCCCAAGGTCACGAGCCCGCCCCACGCCCTCCCTCTCGT
CCTCCCCCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGGGC
CGGAAGGGATCGTCTTCGAGGATGTCTCCTTTGCGTACGGCCCGCACCAA
ATTTTGAGAGAGTGCTCGTTTAAAGTACCTTACGGGCAGACGGTGGCGGT
GGTAGGGCCCTCAGGATGTGGGAAATCGACACTCTTGCGCCTGTTGTACC
GCTTCTATGACGTGGACGGCGGAAGCATTCAGATCAATCACCAGGACATC
CGTGACGTCCCCCTTCCCTCCCTCCGCCGGGCTCTGGGCGTGGTTCCTCA
AGATACTCTCCTCTTCAACGACACCATCTACTACAACATCCACTACGGCA
ACTTACTTGCCAGTCGGGCGGCCGTAGAAACAGCGGCGCGCAAGGCCCAG
ATCCACGAAAGCATTCTACGGATGCCGCAAGGTTATGAGACAAGGGTGGG
AGAACGAGGGTTGAAGTTGAGCGGGGGGGAACGACAACGGGTGGCGATCG
CCCGGGCCATTCTGAAGGACGCACCCATGCTCCTCTGTGACGAGGCAACG
AGTGCCTTGGATGCGGCCACGGAGGGGGAAATCATGCACCACGTCAAGGT
GTTGGGGCAGGGAAAGACGACGCTGATGATCGCGCATCGGCTCAGCACGA
TTCAGGACGCGGACAAAATCGTCGTGCTCGACCAAGGACGGGTGGTGGAG
GAAGGAAGCCATCAGGAGCTTCTCGCCAGGGGGGAGGGAGGGAGGTACGC
AGAGCTCTGGGAGATGCAACAGAAGCACCATGCCGTGCGGGGAGGGGGAG
AGGAAGAAGAAGCGGAGGAGGAGGAGGAGGAGGAGGCGAGGCGGTTGAAG
CGAAAGGCGGCGTATGACGTCAGATTGAGGGGCAATGATGGCAGGAAAAT
ATAA back to topprotein sequence of rna9324 >rna9324-protein ID=rna9324-protein|Name=rna9324|organism=Nannochloropsis gaditana|type=polypeptide|length=423bp
MPPLLRLLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTS
TSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDR
VGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTK
LDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGK
TAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIR
DPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIR
ATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVY
SRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGA
LGHCVFTSAYDVEVLRETIRAYC back to topmRNA from alignment at KK037252.1:390080..392569- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9324 ID=rna9324|Name=rna9324|organism=Nannochloropsis gaditana|type=mRNA|length=2490bp|location=Sequence derived from alignment at KK037252.1:390080..392569- (Nannochloropsis gaditana)
TCCGACGTAGACTTTCCAAACGAATACATTCACGTTGTCATCCTTCATTG
CGTACATATTTCTCCATTGCATGGCACAGGAGATCCCACGCTGACGCGTC
GGTGGCGGTACGGATGCCTCCTCTCCTCCGCCTCCTCCTCTTCACCTCCC
TCAGTGCCTCATGTCAACCTTTCCTCCTCCCTTCAAGAACATTCCTTACG
TGCTCGCCACCGACCCACGCCTTCTCCCGAGGCCAAGTTATCACGATGGC
AAGCTCTACGAGTACATCGGCCGTGTCGACGATGGAAACGGTGCACGTCA
GCCTGGGTGATAGGTCTTACCCAATTTACATCGGACCTGGCTTGCTAAAA
CAACCCAATCTACTCACGCAGCACGTGACCGGCAAACGCTGCATGGTGGT
GACCAATGACGTACGTGAATGGGTAGTCCCATAAATTTTCGTCCCAATAT
CGAGTCTTCTGAAAGCATGCTTGACATGCCCTTCATCGCTCCCTCCTTCC
TTCCCTTCTACTCTTTTTCCAGCGCGTAGGTCCCCTCTACCTGAGCACGG
CCGAATATATCCTCGCCCAGTCCCCTTCCATCCAACCAGGGGACTCCCTT
GTCCTGCCCGACGGGGAAGCTTACAAAGACATGCCCACGCTAAATTTGAT
CATGGACGCCGCCCTCTCTACCAAATTGGACCGGAAAAGCACCCTCGTAG
CTCTTGGGGGGGGCGTAATTGGGGATATGGTTGGATTTGCCGCAGCGATT
TACCAGCGGGGGATTAATTTTATCCAAGTCCCCACGACCTTGATGGCCAT
GGTGGACTCCGCGGTGGGGGGCAAGACTGGTGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGGGGGGGGAGCATGGGCGATGGATTGTCATAGC
CTGGATCTTTTTCTCTGATGAGGCACTGTCGTGATCCTGCAAGGCTTCTT
CCTTAACCTGTCCTTCTCTTTCTCCCTCCCCTCCTTCCCTCCCTCCCTCC
TTCCTTGCCCAAATCCAGCCGTGAACCACAAGCTAGGTAAGAACATGATC
GGAGCCTTCTATCAGCCTCAGTGCGTCATCATCGACACCGATACCCTCAG
CACCCTACCTGACCGGGAACTAGCCTCGGGCATCGCCGAAATCGTCAAAT
ACGGGCTGATTCGGTGCGTCCTCCCTCCCTTTCCTTGTATTGTGCTTCCT
CTTTCTTCACTTCATTTGTTGTTTTTATTCGGCCGCGCTCTTTGTTAAGC
ATCTTCCTTGGCTTCTCCCCCCTGTGCGGCCTCTGTCTCTTCCCGAACAT
CCCTCGTCTCTTCCCGTACGCTGTCGCATTGAGAAAGCTATTTAGCTATT
TCTCCTCTGGCCTCATGCCTCCTTTTTCGCTCCTCTGCACCTTTATACCG
AGCTCGTCCGCGTATTTGCACTGTCTTGTCATGACAGAGAACGTGGTGTG
AATGCATGGACCGAGGGGCGGGCATTGGATGGGAACGTCCCAGCCCTCCC
TCTCCCTTTCCCTACCCACCCCCTGATGTCGTCCACAAAGCATCCGAGAA
AGGGTGCAACCCGACCCCCCTGGTTGCCATACCTAGGAAGGGCTCCGCTG
TCAAATTAATCATATTTCTTCCTTTTTATTTCGATCCTTCGTTTGCATAA
ATATGGACCATGCATCTCGTGGAGCTGACGTGTACTATTCTCTCCCCACC
CCGCTGCTCCGCCTCTTTTTTTCTCTCCCTTTCTTTCTCAGCGATCCCGA
GCTCTTCTGCTGGCTGGAAGACAACATGGAGAAACTCCTGGCCCGCGAAC
CGGCTGCCCTCGGCCACGCGATCAAGCGTTCCTGTGAAAATAAGGCGGAG
ATCGTGGCCTTGGACGAGCGGGAAGGCGAGGCCGGCATTCGTGCCACGTT
GAATCTGGGGCATACATTTGGGCACGCGGTGGAAACCGGCTTGGGCTACG
GCAAGTGGTTGCACGGGGAAGCGGTCAGTCTGGGGATGGTGATGGCGGTC
GACATGTCCGTGCGGCTCGGGTGGGTGGACCGGGAGGTGTATAGCCGTAC
GGTCGGCCTTTTACAACGGGCGGGGTTGCCGGTGGCCTTGCCGGAAGAAA
GTGGGATGGATTTGGAAAAATTCGAGGCGACGATGAGTTTGGACAAGAAA
GTGAGCGACGGGGTGTTACGCTTGATATTGTTGAAAGGCGCGTTGGGTCA
TTGTGTTTTTACGAGCGCGTATGATGTGGAAGTGTTGCGGGAGACGATAC
GTGCGTATTGTTGAAGAAGGAAGGGAGGGAGGGAGGGAATAAAAAAGGAA
CAAATCAGCGGATGTGAAGAAAAAATAGCCCCAAGTGGCGCATATACATG
AGACGTTCACCACGACACGTTGTCTCTCGTAATGCTCGTGGACAAGCATC
AAGCCTTTGCTGCAGATCTTCATGACCAAAGCCAATCCCCTTGGTTAGCG
TTTCCTTCCTTCGACGTGGTGCCTCCCTTCCCTCCTCTCC back to topCoding sequence (CDS) from alignment at KK037252.1:390080..392569- >rna9324 ID=rna9324|Name=rna9324|organism=Nannochloropsis gaditana|type=CDS|length=5088bp|location=Sequence derived from alignment at KK037252.1:390080..392569- (Nannochloropsis gaditana)
CGATCCCGAGCTCTTCTGCTGGCTGGAAGACAACATGGAGAAACTCCTGG
CCCGCGAACCGGCTGCCCTCGGCCACGCGATCAAGCGTTCCTGTGAAAAT
AAGGCGGAGATCGTGGCCTTGGACGAGCGGGAAGGCGAGGCCGGCATTCG
TGCCACGTTGAATCTGGGGCATACATTTGGGCACGCGGTGGAAACCGGCT
TGGGCTACGGCAAGTGGTTGCACGGGGAAGCGGTCAGTCTGGGGATGGTG
ATGGCGGTCGACATGTCCGTGCGGCTCGGGTGGGTGGACCGGGAGGTGTA
TAGCCGTACGGTCGGCCTTTTACAACGGGCGGGGTTGCCGGTGGCCTTGC
CGGAAGAAAGTGGGATGGATTTGGAAAAATTCGAGGCGACGATGAGTTTG
GACAAGAAAGTGAGCGACGGGGTGTTACGCTTGATATTGTTGAAAGGCGC
GTTGGGTCATTGTGTTTTTACGAGCGCGTATGATGTGGAAGTGTTGCGGG
AGACGATACGTGCGTATTGTTGACCGTGAACCACAAGCTAGGTAAGAACA
TGATCGGAGCCTTCTATCAGCCTCAGTGCGTCATCATCGACACCGATACC
CTCAGCACCCTACCTGACCGGGAACTAGCCTCGGGCATCGCCGAAATCGT
CAAATACGGGCTGATTCGCGCGTAGGTCCCCTCTACCTGAGCACGGCCGA
ATATATCCTCGCCCAGTCCCCTTCCATCCAACCAGGGGACTCCCTTGTCC
TGCCCGACGGGGAAGCTTACAAAGACATGCCCACGCTAAATTTGATCATG
GACGCCGCCCTCTCTACCAAATTGGACCGGAAAAGCACCCTCGTAGCTCT
TGGGGGGGGCGTAATTGGGGATATGGTTGGATTTGCCGCAGCGATTTACC
AGCGGGGGATTAATTTTATCCAAGTCCCCACGACCTTGATGGCCATGGTG
GACTCCGCGGTGGGGGGCAAGACTGATGCCTCCTCTCCTCCGCCTCCTCC
TCTTCACCTCCCTCAGTGCCTCATGTCAACCTTTCCTCCTCCCTTCAAGA
ACATTCCTTACGTGCTCGCCACCGACCCACGCCTTCTCCCGAGGCCAAGT
TATCACGATGGCAAGCTCTACGAGTACATCGGCCGTGTCGACGATGGAAA
CGGTGCACGTCAGCCTGGGTGATAGGTCTTACCCAATTTACATCGGACCT
GGCTTGCTAAAACAACCCAATCTACTCACGCAGCACGTGACCGGCAAACG
CTGCATGGTGGTGACCAATGACCGATCCCGAGCTCTTCTGCTGGCTGGAA
GACAACATGGAGAAACTCCTGGCCCGCGAACCGGCTGCCCTCGGCCACGC
GATCAAGCGTTCCTGTGAAAATAAGGCGGAGATCGTGGCCTTGGACGAGC
GGGAAGGCGAGGCCGGCATTCGTGCCACGTTGAATCTGGGGCATACATTT
GGGCACGCGGTGGAAACCGGCTTGGGCTACGGCAAGTGGTTGCACGGGGA
AGCGGTCAGTCTGGGGATGGTGATGGCGGTCGACATGTCCGTGCGGCTCG
GGTGGGTGGACCGGGAGGTGTATAGCCGTACGGTCGGCCTTTTACAACGG
GCGGGGTTGCCGGTGGCCTTGCCGGAAGAAAGTGGGATGGATTTGGAAAA
ATTCGAGGCGACGATGAGTTTGGACAAGAAAGTGAGCGACGGGGTGTTAC
GCTTGATATTGTTGAAAGGCGCGTTGGGTCATTGTGTTTTTACGAGCGCG
TATGATGTGGAAGTGTTGCGGGAGACGATACGTGCGTATTGTTGACCGTG
AACCACAAGCTAGGTAAGAACATGATCGGAGCCTTCTATCAGCCTCAGTG
CGTCATCATCGACACCGATACCCTCAGCACCCTACCTGACCGGGAACTAG
CCTCGGGCATCGCCGAAATCGTCAAATACGGGCTGATTCGCGCGTAGGTC
CCCTCTACCTGAGCACGGCCGAATATATCCTCGCCCAGTCCCCTTCCATC
CAACCAGGGGACTCCCTTGTCCTGCCCGACGGGGAAGCTTACAAAGACAT
GCCCACGCTAAATTTGATCATGGACGCCGCCCTCTCTACCAAATTGGACC
GGAAAAGCACCCTCGTAGCTCTTGGGGGGGGCGTAATTGGGGATATGGTT
GGATTTGCCGCAGCGATTTACCAGCGGGGGATTAATTTTATCCAAGTCCC
CACGACCTTGATGGCCATGGTGGACTCCGCGGTGGGGGGCAAGACTGATG
CCTCCTCTCCTCCGCCTCCTCCTCTTCACCTCCCTCAGTGCCTCATGTCA
ACCTTTCCTCCTCCCTTCAAGAACATTCCTTACGTGCTCGCCACCGACCC
ACGCCTTCTCCCGAGGCCAAGTTATCACGATGGCAAGCTCTACGAGTACA
TCGGCCGTGTCGACGATGGAAACGGTGCACGTCAGCCTGGGTGATAGGTC
TTACCCAATTTACATCGGACCTGGCTTGCTAAAACAACCCAATCTACTCA
CGCAGCACGTGACCGGCAAACGCTGCATGGTGGTGACCAATGACCGATCC
CGAGCTCTTCTGCTGGCTGGAAGACAACATGGAGAAACTCCTGGCCCGCG
AACCGGCTGCCCTCGGCCACGCGATCAAGCGTTCCTGTGAAAATAAGGCG
GAGATCGTGGCCTTGGACGAGCGGGAAGGCGAGGCCGGCATTCGTGCCAC
GTTGAATCTGGGGCATACATTTGGGCACGCGGTGGAAACCGGCTTGGGCT
ACGGCAAGTGGTTGCACGGGGAAGCGGTCAGTCTGGGGATGGTGATGGCG
GTCGACATGTCCGTGCGGCTCGGGTGGGTGGACCGGGAGGTGTATAGCCG
TACGGTCGGCCTTTTACAACGGGCGGGGTTGCCGGTGGCCTTGCCGGAAG
AAAGTGGGATGGATTTGGAAAAATTCGAGGCGACGATGAGTTTGGACAAG
AAAGTGAGCGACGGGGTGTTACGCTTGATATTGTTGAAAGGCGCGTTGGG
TCATTGTGTTTTTACGAGCGCGTATGATGTGGAAGTGTTGCGGGAGACGA
TACGTGCGTATTGTTGACCGTGAACCACAAGCTAGGTAAGAACATGATCG
GAGCCTTCTATCAGCCTCAGTGCGTCATCATCGACACCGATACCCTCAGC
ACCCTACCTGACCGGGAACTAGCCTCGGGCATCGCCGAAATCGTCAAATA
CGGGCTGATTCGCGCGTAGGTCCCCTCTACCTGAGCACGGCCGAATATAT
CCTCGCCCAGTCCCCTTCCATCCAACCAGGGGACTCCCTTGTCCTGCCCG
ACGGGGAAGCTTACAAAGACATGCCCACGCTAAATTTGATCATGGACGCC
GCCCTCTCTACCAAATTGGACCGGAAAAGCACCCTCGTAGCTCTTGGGGG
GGGCGTAATTGGGGATATGGTTGGATTTGCCGCAGCGATTTACCAGCGGG
GGATTAATTTTATCCAAGTCCCCACGACCTTGATGGCCATGGTGGACTCC
GCGGTGGGGGGCAAGACTGATGCCTCCTCTCCTCCGCCTCCTCCTCTTCA
CCTCCCTCAGTGCCTCATGTCAACCTTTCCTCCTCCCTTCAAGAACATTC
CTTACGTGCTCGCCACCGACCCACGCCTTCTCCCGAGGCCAAGTTATCAC
GATGGCAAGCTCTACGAGTACATCGGCCGTGTCGACGATGGAAACGGTGC
ACGTCAGCCTGGGTGATAGGTCTTACCCAATTTACATCGGACCTGGCTTG
CTAAAACAACCCAATCTACTCACGCAGCACGTGACCGGCAAACGCTGCAT
GGTGGTGACCAATGACCGATCCCGAGCTCTTCTGCTGGCTGGAAGACAAC
ATGGAGAAACTCCTGGCCCGCGAACCGGCTGCCCTCGGCCACGCGATCAA
GCGTTCCTGTGAAAATAAGGCGGAGATCGTGGCCTTGGACGAGCGGGAAG
GCGAGGCCGGCATTCGTGCCACGTTGAATCTGGGGCATACATTTGGGCAC
GCGGTGGAAACCGGCTTGGGCTACGGCAAGTGGTTGCACGGGGAAGCGGT
CAGTCTGGGGATGGTGATGGCGGTCGACATGTCCGTGCGGCTCGGGTGGG
TGGACCGGGAGGTGTATAGCCGTACGGTCGGCCTTTTACAACGGGCGGGG
TTGCCGGTGGCCTTGCCGGAAGAAAGTGGGATGGATTTGGAAAAATTCGA
GGCGACGATGAGTTTGGACAAGAAAGTGAGCGACGGGGTGTTACGCTTGA
TATTGTTGAAAGGCGCGTTGGGTCATTGTGTTTTTACGAGCGCGTATGAT
GTGGAAGTGTTGCGGGAGACGATACGTGCGTATTGTTGACCGTGAACCAC
AAGCTAGGTAAGAACATGATCGGAGCCTTCTATCAGCCTCAGTGCGTCAT
CATCGACACCGATACCCTCAGCACCCTACCTGACCGGGAACTAGCCTCGG
GCATCGCCGAAATCGTCAAATACGGGCTGATTCGCGCGTAGGTCCCCTCT
ACCTGAGCACGGCCGAATATATCCTCGCCCAGTCCCCTTCCATCCAACCA
GGGGACTCCCTTGTCCTGCCCGACGGGGAAGCTTACAAAGACATGCCCAC
GCTAAATTTGATCATGGACGCCGCCCTCTCTACCAAATTGGACCGGAAAA
GCACCCTCGTAGCTCTTGGGGGGGGCGTAATTGGGGATATGGTTGGATTT
GCCGCAGCGATTTACCAGCGGGGGATTAATTTTATCCAAGTCCCCACGAC
CTTGATGGCCATGGTGGACTCCGCGGTGGGGGGCAAGACTGATGCCTCCT
CTCCTCCGCCTCCTCCTCTTCACCTCCCTCAGTGCCTCATGTCAACCTTT
CCTCCTCCCTTCAAGAACATTCCTTACGTGCTCGCCACCGACCCACGCCT
TCTCCCGAGGCCAAGTTATCACGATGGCAAGCTCTACGAGTACATCGGCC
GTGTCGACGATGGAAACGGTGCACGTCAGCCTGGGTGATAGGTCTTACCC
AATTTACATCGGACCTGGCTTGCTAAAACAACCCAATCTACTCACGCAGC
ACGTGACCGGCAAACGCTGCATGGTGGTGACCAATGAC back to top
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