EWM21378.1, cds9294 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|585101592|gb|EWM21378.1| (3-dehydroquinate synthase [Nannochloropsis gaditana]) HSP 1 Score: 868.226 bits (2242), Expect = 0.000e+0 Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query: 1 MPPLLRLLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
MPPLLRLLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC
Sbjct: 1 MPPLLRLLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|76782192|gb|ABA54866.1| (putative 3-dehydroquinate synthase [Fagus sylvatica]) HSP 1 Score: 509.99 bits (1312), Expect = 1.346e-176 Identity = 245/386 (63.47%), Postives = 307/386 (79.53%), Query Frame = 0
Query: 38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYL-STAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAY 422
S QV+ + + S T+ V V+LG+RSYPIYIGPGLL QP+LL +HV GKR +VVTND+VGPLYL E + +P++ +S++LPDGE YKDM TL + D A+ ++LDR+ T VALGGGVIGDM G+AAA Y RGINFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDTDTL+TLPDRELASG+AE++KYGLIRD E F W E N++ L+AR+P AL +AIKRSCENKAE+V+LDE+ E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV++GMVMAVDMS RLGW+D + R +LQ+A LP PE M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT YD + L ET+RA+
Sbjct: 78 SSAQVMDQSVTKSDPTAPTI--VDVNLGNRSYPIYIGPGLLDQPHLLQKHVHGKRVLVVTNDKVGPLYLDKVVEALTKGNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGINFIQIPTTVMAQVDSSVGGKTGINHHLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNIQALMARDPNALAYAIKRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTFPPEI--MTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRAF 456
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|1149742603|ref|XP_020194831.1| (3-dehydroquinate synthase, chloroplastic [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 509.22 bits (1310), Expect = 1.636e-176 Identity = 250/393 (63.61%), Postives = 304/393 (77.35%), Query Frame = 0
Query: 33 PTHAFSRGQVITMASSTSTSAVSTMETV-HVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILA-QSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
P A V + A + AVS + TV V LGDRSYPIYIGPGLL +P+LL +HV GKR +VVTN V PLYL + L Q+P++ +S++LPDGE YKDM TL + D A+ ++LDR+ T VALGGGVIGDM GFAAA + RG+NFIQ+PTTLMA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDT+TL+TLPDRELASG+AE+VKYGLIRD F W E NM +LAREP+AL +AIKRSCENKAE+VA DE+ E+G+RATLNLGHTFGHA+ETGLGYG+WLHGEAV+ G VMA DMS RLGW+D + RT +L +A LPV P+ GM +EKF+ M++DKKV+DG+LRLILLKG LG CVFT YD + L ET+RA+C
Sbjct: 54 PARALRSRVVASAAPAMEPPAVSRVSTVVDVDLGDRSYPIYIGPGLLDEPDLLQRHVIGKRVLVVTNTTVAPLYLEKVTWALTHQNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAVESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTETLNTLPDRELASGVAEVVKYGLIRDAPFFEWQEKNMAAILAREPSALTYAIKRSCENKAEVVAQDEK--ESGLRATLNLGHTFGHAIETGLGYGEWLHGEAVAAGTVMAADMSYRLGWIDESIKKRTFDILDQAKLPVTPPK--GMTVEKFKNIMAVDKKVADGLLRLILLKGPLGGCVFTGEYDRKALDETLRAFC 441
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|1117445726|ref|XP_019420885.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Lupinus angustifolius]) HSP 1 Score: 507.294 bits (1305), Expect = 5.279e-176 Identity = 249/412 (60.44%), Postives = 312/412 (75.73%), Query Frame = 0
Query: 20 FLLPSRTFLTCSPPTHAFS--------RGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
F P++ L +P +FS QV+ + S + SAV T TV+V LGDRSYPIYIG GLL QP+LL +HV G+R +VVTN V PLYL + L S +S++LPDGE YKDM TL + D A+ ++LDR+ST VALGGGVIGDM GFAAA + RGINFIQ+PTT+MA VDS+VGGKT +NH+LGKN+IGAFYQPQCV+IDTDTL+TLP+RELASG AE++KYGLIRD E F W E NM L+AR+P AL +AIKRSCENKAE+V+LDE+ E+G+RATLNLGHTFGHA+ETG+GYG+WLHGEAV+ G VMAVDMS RLGW+D + R +L++ LP + PE MD+ F++ M++DKKV+DG+LRLILLKG LG+CVFT YD + L +T+RA+C
Sbjct: 23 FHYPTKYNLHFNPKFVSFSTTRKIYATSSQVMNPSLSETHSAVPT--TVNVDLGDRSYPIYIGSGLLDQPHLLQRHVHGRRVLVVTNTTVAPLYLDKVVHALTTENSNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRSTFVALGGGVIGDMCGFAAASFLRGINFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPERELASGFAEVIKYGLIRDAEFFEWQEKNMHALMARDPNALAYAIKRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVGDILKQTKLPTSPPETVTMDM--FKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLRAFC 428
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|326519210|dbj|BAJ96604.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 507.679 bits (1306), Expect = 6.106e-176 Identity = 249/393 (63.36%), Postives = 303/393 (77.10%), Query Frame = 0
Query: 33 PTHAFSRGQVITMASSTSTSAVSTMETV-HVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILA-QSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
P A V + A + AVS + TV V LGDRSYPIYIGPGLL +P+LL +HV GKR +VVTN V PLYL + L Q+P++ +S++LPDGE YKDM TL + D A+ ++LDR+ T VALGGGVIGDM GFAA+ + RG+NFIQ+PTTLMA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDT+TL+TLPDRELASG+AE+VKYGLIRD F W E NM +LAREP+AL +AIKRSCENKAE+VA DE+ E+G+RATLNLGHTFGHA+ETGLGYG+WLHGEAV+ G VMA DMS RLGW+D + RT +L +A LPV P+ GM +EKF M++DKKV+DG+LRLILLKG LG CVFT YD + L ET+RA+C
Sbjct: 52 PARALRSRVVASAAPAMQPPAVSRVSTVVDVDLGDRSYPIYIGPGLLNEPDLLQRHVIGKRVLVVTNTTVAPLYLEKVTWALTHQNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAVESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTETLNTLPDRELASGVAEVVKYGLIRDAPFFEWQEKNMAAILAREPSALTYAIKRSCENKAEVVAQDEK--ESGLRATLNLGHTFGHAIETGLGYGEWLHGEAVAAGTVMAADMSYRLGWIDESIKKRTFDILDQAKLPVTPPK--GMTVEKFRNIMAVDKKVADGLLRLILLKGPLGGCVFTGEYDRKALDETLRAFC 439
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|302817748|ref|XP_002990549.1| (hypothetical protein SELMODRAFT_131934 [Selaginella moellendorffii] >gi|300141717|gb|EFJ08426.1| hypothetical protein SELMODRAFT_131934 [Selaginella moellendorffii]) HSP 1 Score: 504.597 bits (1298), Expect = 7.470e-176 Identity = 243/367 (66.21%), Postives = 292/367 (79.56%), Query Frame = 0
Query: 57 METVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
ME V V L DR+YPIYIG GLL +P LL +HV GK +VVTN V PLYL +L + S +S++LPDGE YKDM TL + D A+ T++DR+ T VALGGGVIGDM GFAAA + RG+NFIQ+PTTLMA VDS+VGGKT VNH LGKN+IGAFYQPQCV+IDTDTLSTLP+REL SGIAE+VKYGLIRD + F W E+NM+KLLAR+P AL +AIKRSCENKAE+V+LDE+ EAG+RATLNLGHTFGHA+ETG+GYG WLHGEAV+ G VMA D+S RLGW+D + SR + LL+RA +PVA P S M +EKF+ M++DKKV DG LRLILLKG LG+CVFTSAYD + L ET+ ++C
Sbjct: 1 MEVVDVDLSDRTYPIYIGSGLLDKPELLQKHVKGKNVLVVTNTTVAPLYLEKVVGLLKANGSKINVESVILPDGEKYKDMGTLMKVFDKAVETRMDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGVNHPLGKNLIGAFYQPQCVVIDTDTLSTLPERELCSGIAEVVKYGLIRDAKFFEWQEENMDKLLARDPDALAYAIKRSCENKAEVVSLDEK--EAGLRATLNLGHTFGHAIETGIGYGGWLHGEAVAAGTVMAADLSFRLGWIDASLQSRILNLLERAKVPVAPP--STMTVEKFQNIMAVDKKVVDGDLRLILLKGELGNCVFTSAYDTKALEETLHSFC 363
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|1098845566|ref|XP_018829584.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Juglans regia]) HSP 1 Score: 507.679 bits (1306), Expect = 9.067e-176 Identity = 241/386 (62.44%), Postives = 302/386 (78.24%), Query Frame = 0
Query: 38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
S QV+ + + + + T+ V V LG+RSYPIYIG GLL QP+LL +HV GKR +VVTN+ V PLYL L Q +S++LPDGE YK M TL I D A+ ++LDR+ST VALGGGVIGDM GFAAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH+LGKN+IGAFYQPQCV+IDTDTL+TLPDRELASG+AE++KYGLIRD E F W E NM+ L+AR+P+AL +AI+RSCENKAE+V+LDE+ E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV+ GMVMAVDMS RLGW+D + R +LQRA LP PE M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT YD ++L ET+ ++C
Sbjct: 71 SSAQVMDQSVAKTDARAPTV--VEVDLGNRSYPIYIGSGLLDQPHLLQRHVHGKRVLVVTNNTVAPLYLDKVVEALTQGNPNVSVESVILPDGEKYKQMDTLMKIFDKAIESRLDRRSTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMQALMARDPSALAYAIRRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVDNILQRAKLPSTPPE--AMTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKILDETLHSFC 450
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|720046114|ref|XP_010270402.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Nelumbo nucifera]) HSP 1 Score: 508.064 bits (1307), Expect = 9.262e-176 Identity = 249/414 (60.14%), Postives = 309/414 (74.64%), Query Frame = 0
Query: 10 FTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
+ LS +C P L R P S V+ + ++S +ST+ V V LGDRSYPIYIG GLL++PNLL +HV GKR +VVTN + PLYL L S +S++LPDGE YKDM TL + D A+ ++ DR+ST VALGGGVIGDM GFAAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTL+TLPDRELASG AE+VKYGLIRD E F W E NM+ LLAR+P+AL +AIKRSCENKA++VALDE+ E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV+ G VMAVDMS RLGW+D + R +LQ+A LP A P+ M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT YD + L ET+ A+C
Sbjct: 53 LSGLSRTCAPVLKSGRI-----PTKIEASSAPVMDQSQRKASSRLSTI--VDVDLGDRSYPIYIGSGLLEEPNLLQRHVHGKRVLVVTNTTIAPLYLDKVINALTYGSSNVLVESVILPDGEKYKDMDTLMKVFDKAIESRFDRRSTFVALGGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGFAEVVKYGLIRDAEFFEWQEKNMQALLARDPSALVYAIKRSCENKAQVVALDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGTVMAVDMSYRLGWIDESIVRRVYNILQQAKLPTAPPDM--MTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLHAFC 455
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|449456829|ref|XP_004146151.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic [Cucumis sativus] >gi|700200515|gb|KGN55648.1| hypothetical protein Csa_3G002680 [Cucumis sativus]) HSP 1 Score: 507.679 bits (1306), Expect = 9.369e-176 Identity = 240/387 (62.02%), Postives = 308/387 (79.59%), Query Frame = 0
Query: 38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYL-STAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
S Q++ ++ + S+ T+ V V LGDRSYPIYIG GLL QP +L +HV GKR ++VTN+ V PLYL E + +P++ +S+VLPDGE YKDM TL + D A+ ++LDR+ T VALGGGVIGDM G+AAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH+LGKN+IGAFYQPQCV++DTDTL+TLPDRELASG AE++KYGLIRD E F W E NM L+AR+PAAL +AIKRSCENKAE+V+LDE+ E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV++G VMAVDMS RLGW+D + SR + +L++A LP+A PE M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT YD + L ET+R++C
Sbjct: 71 SSAQIMDQSAIKTDSSAPTI--VEVDLGDRSYPIYIGSGLLDQPEILQRHVHGKRVLIVTNETVAPLYLDKVTEALTIGNPNVSV-ESVVLPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEKNMPSLMARDPAALAYAIKRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGTVMAVDMSYRLGWIDDTIVSRVLAILKQAKLPIAPPES--MTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRSFC 450
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|658033821|ref|XP_008352428.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Malus domestica]) HSP 1 Score: 507.679 bits (1306), Expect = 9.909e-176 Identity = 242/387 (62.53%), Postives = 304/387 (78.55%), Query Frame = 0
Query: 38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYL-STAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
S QV+ SS + T+ V V LG+RSYPIYIG GLL QP LL +HV GKR +VVTN +V PLYL E + +P++ +S++LPDGE YKDM TL + D A+ ++LDR+ T VALGGGVIGDM G+AAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDTDTL+TLPDRELASG+AE++KYGLIRD + F W E N++ L+AR+PAA+ +AIKRSCENKAE+V+LDE+EG G+RATLNLGHTFGHA+ETGLGYG WLHGEAV+ GMVMAVDMS RLGW+D + RT +L++A LP+A PE + +E F + M++DKKV+DG+LRLILLKG LG+CVFT YD + L ET+ A+C
Sbjct: 77 SSAQVVDQPSSKTGPVAPTV--VDVDLGNRSYPIYIGSGLLDQPELLQRHVHGKRVLVVTNTKVAPLYLDKVVEALTRDNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDADFFEWQERNIQALMARDPAAMAYAIKRSCENKAEVVSLDEKEG--GLRATLNLGHTFGHAIETGLGYGNWLHGEAVAAGMVMAVDMSYRLGWIDDALVKRTTNILKQAKLPIAPPES--VTIETFRSVMAVDKKVADGLLRLILLKGPLGNCVFTGEYDRKALDETLHAFC 456 The following BLAST results are available for this feature:
BLAST of EWM21378.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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