EWM21378.1, cds9294 (CDS) Nannochloropsis gaditana

Overview
NameEWM21378.1
Unique Namecds9294
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:392160..392456 -
Alignment locationKK037252.1:391741..392047 -
Alignment locationKK037252.1:391407..391551 -
Alignment locationKK037252.1:390306..390828 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21378.1
Product3-dehydroquinate synthase
Orig transcript idgnl|cribi|Naga_100424g3.4520.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:392160..392456 -
KK037252.1supercontigKK037252.1:391741..392047 -
KK037252.1supercontigKK037252.1:391407..391551 -
KK037252.1supercontigKK037252.1:390306..390828 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0009073aromatic amino acid family biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0005768endosome
GO:0009507chloroplast
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038563-dehydroquinate synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR016037DHQ_synth_AroB
IPR030960DHQS/DOIS
Homology
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|585101592|gb|EWM21378.1| (3-dehydroquinate synthase [Nannochloropsis gaditana])

HSP 1 Score: 868.226 bits (2242), Expect = 0.000e+0
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query:    1 MPPLLRLLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            MPPLLRLLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC
Sbjct:    1 MPPLLRLLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|76782192|gb|ABA54866.1| (putative 3-dehydroquinate synthase [Fagus sylvatica])

HSP 1 Score: 509.99 bits (1312), Expect = 1.346e-176
Identity = 245/386 (63.47%), Postives = 307/386 (79.53%), Query Frame = 0
Query:   38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYL-STAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAY 422
            S  QV+  + + S     T+  V V+LG+RSYPIYIGPGLL QP+LL +HV GKR +VVTND+VGPLYL    E +   +P++   +S++LPDGE YKDM TL  + D A+ ++LDR+ T VALGGGVIGDM G+AAA Y RGINFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDTDTL+TLPDRELASG+AE++KYGLIRD E F W E N++ L+AR+P AL +AIKRSCENKAE+V+LDE+  E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV++GMVMAVDMS RLGW+D  +  R   +LQ+A LP   PE   M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT  YD + L ET+RA+
Sbjct:   78 SSAQVMDQSVTKSDPTAPTI--VDVNLGNRSYPIYIGPGLLDQPHLLQKHVHGKRVLVVTNDKVGPLYLDKVVEALTKGNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGINFIQIPTTVMAQVDSSVGGKTGINHHLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNIQALMARDPNALAYAIKRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTFPPEI--MTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRAF 456          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|1149742603|ref|XP_020194831.1| (3-dehydroquinate synthase, chloroplastic [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 509.22 bits (1310), Expect = 1.636e-176
Identity = 250/393 (63.61%), Postives = 304/393 (77.35%), Query Frame = 0
Query:   33 PTHAFSRGQVITMASSTSTSAVSTMETV-HVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILA-QSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            P  A     V + A +    AVS + TV  V LGDRSYPIYIGPGLL +P+LL +HV GKR +VVTN  V PLYL    + L  Q+P++   +S++LPDGE YKDM TL  + D A+ ++LDR+ T VALGGGVIGDM GFAAA + RG+NFIQ+PTTLMA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDT+TL+TLPDRELASG+AE+VKYGLIRD   F W E NM  +LAREP+AL +AIKRSCENKAE+VA DE+  E+G+RATLNLGHTFGHA+ETGLGYG+WLHGEAV+ G VMA DMS RLGW+D  +  RT  +L +A LPV  P+  GM +EKF+  M++DKKV+DG+LRLILLKG LG CVFT  YD + L ET+RA+C
Sbjct:   54 PARALRSRVVASAAPAMEPPAVSRVSTVVDVDLGDRSYPIYIGPGLLDEPDLLQRHVIGKRVLVVTNTTVAPLYLEKVTWALTHQNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAVESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTETLNTLPDRELASGVAEVVKYGLIRDAPFFEWQEKNMAAILAREPSALTYAIKRSCENKAEVVAQDEK--ESGLRATLNLGHTFGHAIETGLGYGEWLHGEAVAAGTVMAADMSYRLGWIDESIKKRTFDILDQAKLPVTPPK--GMTVEKFKNIMAVDKKVADGLLRLILLKGPLGGCVFTGEYDRKALDETLRAFC 441          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|1117445726|ref|XP_019420885.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Lupinus angustifolius])

HSP 1 Score: 507.294 bits (1305), Expect = 5.279e-176
Identity = 249/412 (60.44%), Postives = 312/412 (75.73%), Query Frame = 0
Query:   20 FLLPSRTFLTCSPPTHAFS--------RGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            F  P++  L  +P   +FS          QV+  + S + SAV T  TV+V LGDRSYPIYIG GLL QP+LL +HV G+R +VVTN  V PLYL    + L    S    +S++LPDGE YKDM TL  + D A+ ++LDR+ST VALGGGVIGDM GFAAA + RGINFIQ+PTT+MA VDS+VGGKT +NH+LGKN+IGAFYQPQCV+IDTDTL+TLP+RELASG AE++KYGLIRD E F W E NM  L+AR+P AL +AIKRSCENKAE+V+LDE+  E+G+RATLNLGHTFGHA+ETG+GYG+WLHGEAV+ G VMAVDMS RLGW+D  +  R   +L++  LP + PE   MD+  F++ M++DKKV+DG+LRLILLKG LG+CVFT  YD + L +T+RA+C
Sbjct:   23 FHYPTKYNLHFNPKFVSFSTTRKIYATSSQVMNPSLSETHSAVPT--TVNVDLGDRSYPIYIGSGLLDQPHLLQRHVHGRRVLVVTNTTVAPLYLDKVVHALTTENSNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRSTFVALGGGVIGDMCGFAAASFLRGINFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPERELASGFAEVIKYGLIRDAEFFEWQEKNMHALMARDPNALAYAIKRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVGDILKQTKLPTSPPETVTMDM--FKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLRAFC 428          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|326519210|dbj|BAJ96604.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 507.679 bits (1306), Expect = 6.106e-176
Identity = 249/393 (63.36%), Postives = 303/393 (77.10%), Query Frame = 0
Query:   33 PTHAFSRGQVITMASSTSTSAVSTMETV-HVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILA-QSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            P  A     V + A +    AVS + TV  V LGDRSYPIYIGPGLL +P+LL +HV GKR +VVTN  V PLYL    + L  Q+P++   +S++LPDGE YKDM TL  + D A+ ++LDR+ T VALGGGVIGDM GFAA+ + RG+NFIQ+PTTLMA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDT+TL+TLPDRELASG+AE+VKYGLIRD   F W E NM  +LAREP+AL +AIKRSCENKAE+VA DE+  E+G+RATLNLGHTFGHA+ETGLGYG+WLHGEAV+ G VMA DMS RLGW+D  +  RT  +L +A LPV  P+  GM +EKF   M++DKKV+DG+LRLILLKG LG CVFT  YD + L ET+RA+C
Sbjct:   52 PARALRSRVVASAAPAMQPPAVSRVSTVVDVDLGDRSYPIYIGPGLLNEPDLLQRHVIGKRVLVVTNTTVAPLYLEKVTWALTHQNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAVESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTETLNTLPDRELASGVAEVVKYGLIRDAPFFEWQEKNMAAILAREPSALTYAIKRSCENKAEVVAQDEK--ESGLRATLNLGHTFGHAIETGLGYGEWLHGEAVAAGTVMAADMSYRLGWIDESIKKRTFDILDQAKLPVTPPK--GMTVEKFRNIMAVDKKVADGLLRLILLKGPLGGCVFTGEYDRKALDETLRAFC 439          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|302817748|ref|XP_002990549.1| (hypothetical protein SELMODRAFT_131934 [Selaginella moellendorffii] >gi|300141717|gb|EFJ08426.1| hypothetical protein SELMODRAFT_131934 [Selaginella moellendorffii])

HSP 1 Score: 504.597 bits (1298), Expect = 7.470e-176
Identity = 243/367 (66.21%), Postives = 292/367 (79.56%), Query Frame = 0
Query:   57 METVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            ME V V L DR+YPIYIG GLL +P LL +HV GK  +VVTN  V PLYL     +L  + S    +S++LPDGE YKDM TL  + D A+ T++DR+ T VALGGGVIGDM GFAAA + RG+NFIQ+PTTLMA VDS+VGGKT VNH LGKN+IGAFYQPQCV+IDTDTLSTLP+REL SGIAE+VKYGLIRD + F W E+NM+KLLAR+P AL +AIKRSCENKAE+V+LDE+  EAG+RATLNLGHTFGHA+ETG+GYG WLHGEAV+ G VMA D+S RLGW+D  + SR + LL+RA +PVA P  S M +EKF+  M++DKKV DG LRLILLKG LG+CVFTSAYD + L ET+ ++C
Sbjct:    1 MEVVDVDLSDRTYPIYIGSGLLDKPELLQKHVKGKNVLVVTNTTVAPLYLEKVVGLLKANGSKINVESVILPDGEKYKDMGTLMKVFDKAVETRMDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGVNHPLGKNLIGAFYQPQCVVIDTDTLSTLPERELCSGIAEVVKYGLIRDAKFFEWQEENMDKLLARDPDALAYAIKRSCENKAEVVSLDEK--EAGLRATLNLGHTFGHAIETGIGYGGWLHGEAVAAGTVMAADLSFRLGWIDASLQSRILNLLERAKVPVAPP--STMTVEKFQNIMAVDKKVVDGDLRLILLKGELGNCVFTSAYDTKALEETLHSFC 363          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|1098845566|ref|XP_018829584.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Juglans regia])

HSP 1 Score: 507.679 bits (1306), Expect = 9.067e-176
Identity = 241/386 (62.44%), Postives = 302/386 (78.24%), Query Frame = 0
Query:   38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            S  QV+  + + + +   T+  V V LG+RSYPIYIG GLL QP+LL +HV GKR +VVTN+ V PLYL      L Q       +S++LPDGE YK M TL  I D A+ ++LDR+ST VALGGGVIGDM GFAAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH+LGKN+IGAFYQPQCV+IDTDTL+TLPDRELASG+AE++KYGLIRD E F W E NM+ L+AR+P+AL +AI+RSCENKAE+V+LDE+  E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV+ GMVMAVDMS RLGW+D  +  R   +LQRA LP   PE   M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT  YD ++L ET+ ++C
Sbjct:   71 SSAQVMDQSVAKTDARAPTV--VEVDLGNRSYPIYIGSGLLDQPHLLQRHVHGKRVLVVTNNTVAPLYLDKVVEALTQGNPNVSVESVILPDGEKYKQMDTLMKIFDKAIESRLDRRSTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMQALMARDPSALAYAIRRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVDNILQRAKLPSTPPE--AMTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKILDETLHSFC 450          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|720046114|ref|XP_010270402.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Nelumbo nucifera])

HSP 1 Score: 508.064 bits (1307), Expect = 9.262e-176
Identity = 249/414 (60.14%), Postives = 309/414 (74.64%), Query Frame = 0
Query:   10 FTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
             + LS +C P L   R      P     S   V+  +   ++S +ST+  V V LGDRSYPIYIG GLL++PNLL +HV GKR +VVTN  + PLYL      L    S    +S++LPDGE YKDM TL  + D A+ ++ DR+ST VALGGGVIGDM GFAAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTL+TLPDRELASG AE+VKYGLIRD E F W E NM+ LLAR+P+AL +AIKRSCENKA++VALDE+  E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV+ G VMAVDMS RLGW+D  +  R   +LQ+A LP A P+   M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT  YD + L ET+ A+C
Sbjct:   53 LSGLSRTCAPVLKSGRI-----PTKIEASSAPVMDQSQRKASSRLSTI--VDVDLGDRSYPIYIGSGLLEEPNLLQRHVHGKRVLVVTNTTIAPLYLDKVINALTYGSSNVLVESVILPDGEKYKDMDTLMKVFDKAIESRFDRRSTFVALGGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGFAEVVKYGLIRDAEFFEWQEKNMQALLARDPSALVYAIKRSCENKAQVVALDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGTVMAVDMSYRLGWIDESIVRRVYNILQQAKLPTAPPDM--MTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLHAFC 455          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|449456829|ref|XP_004146151.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic [Cucumis sativus] >gi|700200515|gb|KGN55648.1| hypothetical protein Csa_3G002680 [Cucumis sativus])

HSP 1 Score: 507.679 bits (1306), Expect = 9.369e-176
Identity = 240/387 (62.02%), Postives = 308/387 (79.59%), Query Frame = 0
Query:   38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYL-STAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            S  Q++  ++  + S+  T+  V V LGDRSYPIYIG GLL QP +L +HV GKR ++VTN+ V PLYL    E +   +P++   +S+VLPDGE YKDM TL  + D A+ ++LDR+ T VALGGGVIGDM G+AAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH+LGKN+IGAFYQPQCV++DTDTL+TLPDRELASG AE++KYGLIRD E F W E NM  L+AR+PAAL +AIKRSCENKAE+V+LDE+  E+G+RATLNLGHTFGHA+ETG GYG+WLHGEAV++G VMAVDMS RLGW+D  + SR + +L++A LP+A PE   M +E F++ M++DKKV+DG+LRLILLKG LG+CVFT  YD + L ET+R++C
Sbjct:   71 SSAQIMDQSAIKTDSSAPTI--VEVDLGDRSYPIYIGSGLLDQPEILQRHVHGKRVLIVTNETVAPLYLDKVTEALTIGNPNVSV-ESVVLPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEKNMPSLMARDPAALAYAIKRSCENKAEVVSLDEK--ESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGTVMAVDMSYRLGWIDDTIVSRVLAILKQAKLPIAPPES--MTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRSFC 450          
BLAST of EWM21378.1 vs. NCBI_GenBank
Match: gi|658033821|ref|XP_008352428.1| (PREDICTED: 3-dehydroquinate synthase, chloroplastic-like [Malus domestica])

HSP 1 Score: 507.679 bits (1306), Expect = 9.909e-176
Identity = 242/387 (62.53%), Postives = 304/387 (78.55%), Query Frame = 0
Query:   38 SRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYL-STAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
            S  QV+   SS +     T+  V V LG+RSYPIYIG GLL QP LL +HV GKR +VVTN +V PLYL    E +   +P++   +S++LPDGE YKDM TL  + D A+ ++LDR+ T VALGGGVIGDM G+AAA + RG+NFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDTDTL+TLPDRELASG+AE++KYGLIRD + F W E N++ L+AR+PAA+ +AIKRSCENKAE+V+LDE+EG  G+RATLNLGHTFGHA+ETGLGYG WLHGEAV+ GMVMAVDMS RLGW+D  +  RT  +L++A LP+A PE   + +E F + M++DKKV+DG+LRLILLKG LG+CVFT  YD + L ET+ A+C
Sbjct:   77 SSAQVVDQPSSKTGPVAPTV--VDVDLGNRSYPIYIGSGLLDQPELLQRHVHGKRVLVVTNTKVAPLYLDKVVEALTRDNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDADFFEWQERNIQALMARDPAAMAYAIKRSCENKAEVVSLDEKEG--GLRATLNLGHTFGHAIETGLGYGNWLHGEAVAAGMVMAVDMSYRLGWIDDALVKRTTNILKQAKLPIAPPES--VTIETFRSVMAVDKKVADGLLRLILLKGPLGNCVFTGEYDRKALDETLHAFC 456          
The following BLAST results are available for this feature:
BLAST of EWM21378.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101592|gb|EWM21378.1|0.000e+0100.003-dehydroquinate synthase [Nannochloropsis gaditan... [more]
gi|76782192|gb|ABA54866.1|1.346e-17663.47putative 3-dehydroquinate synthase [Fagus sylvatic... [more]
gi|1149742603|ref|XP_020194831.1|1.636e-17663.613-dehydroquinate synthase, chloroplastic [Aegilops... [more]
gi|1117445726|ref|XP_019420885.1|5.279e-17660.44PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
gi|326519210|dbj|BAJ96604.1|6.106e-17663.36predicted protein [Hordeum vulgare subsp. vulgare][more]
gi|302817748|ref|XP_002990549.1|7.470e-17666.21hypothetical protein SELMODRAFT_131934 [Selaginell... [more]
gi|1098845566|ref|XP_018829584.1|9.067e-17662.44PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
gi|720046114|ref|XP_010270402.1|9.262e-17660.14PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
gi|449456829|ref|XP_004146151.1|9.369e-17662.02PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
gi|658033821|ref|XP_008352428.1|9.909e-17662.53PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9324rna9324Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications