EWM21390.1, cds9285 (CDS) Nannochloropsis gaditana

Overview
NameEWM21390.1
Unique Namecds9285
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:366543..366565 -
Alignment locationKK037252.1:366221..366385 -
Alignment locationKK037252.1:365326..365794 -

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Properties
Property NameValue
Protein idEWM21390.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100215g10.1632.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:366543..366565 -
KK037252.1supercontigKK037252.1:366221..366385 -
KK037252.1supercontigKK037252.1:365326..365794 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21390.1 vs. NCBI_GenBank
Match: gi|585101607|gb|EWM21390.1| (hypothetical protein Naga_100215g10 [Nannochloropsis gaditana])

HSP 1 Score: 445.277 bits (1144), Expect = 2.666e-158
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 
Query:    1 MSRGGHKRLSHCGVSFPPDMQHHQTSVTWVVFLSCILLLGQVPAFVRCPKPTQIQVGGVSMQRCCTALTSSSSSSSSPRSSSSSPPSTHRNPPSFVLRRTFGLLTSVAAFFLAPTSFPPSSPSSTSITTTSSWSAQAADATDLQDLSAPTPAEKEAARVKAKLKRQQEALIMENAAKGGGDEKNYGDSLKREREKQRMLKKDAKQRRQDLCEQLGRGC 218
            MSRGGHKRLSHCGVSFPPDMQHHQTSVTWVVFLSCILLLGQVPAFVRCPKPTQIQVGGVSMQRCCTALTSSSSSSSSPRSSSSSPPSTHRNPPSFVLRRTFGLLTSVAAFFLAPTSFPPSSPSSTSITTTSSWSAQAADATDLQDLSAPTPAEKEAARVKAKLKRQQEALIMENAAKGGGDEKNYGDSLKREREKQRMLKKDAKQRRQDLCEQLGRGC
Sbjct:    1 MSRGGHKRLSHCGVSFPPDMQHHQTSVTWVVFLSCILLLGQVPAFVRCPKPTQIQVGGVSMQRCCTALTSSSSSSSSPRSSSSSPPSTHRNPPSFVLRRTFGLLTSVAAFFLAPTSFPPSSPSSTSITTTSSWSAQAADATDLQDLSAPTPAEKEAARVKAKLKRQQEALIMENAAKGGGDEKNYGDSLKREREKQRMLKKDAKQRRQDLCEQLGRGC 218
[Close]
BLAST of EWM21390.1 vs. NCBI_GenBank
Match: gi|553187897|ref|XP_005854702.1| (hypothetical protein NGA_0349102 [Nannochloropsis gaditana CCMP526] >gi|422294358|gb|EKU21658.1| hypothetical protein NGA_0349102 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 402.134 bits (1032), Expect = 1.608e-141
Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0 
Query:   20 MQHHQTSVTWVVFLSCILLLGQVPAFVRCPKPTQIQVGGVSMQRCCTALTSSSSSSSSPRSSSSSPPSTHRNPPSFVLRRTFGLLTSVAAFFLAPTSFPPSSPSSTSITTTSSWSAQAADATDLQDLSAPTPAEKEAARVKAKLKRQQEALIMENAAKGGGDEKNYGDSLKREREKQRMLKKDAKQRRQDLCEQLGRGC 218
            MQHHQTSVTWVVFLSCILLLGQVPAFVRCPKPTQI VGGVSMQRCCTALTSSSSSSSSPRSSSSSPPSTHRNPPSFVLRRTFGLLTSVAAFFLAPTSFPPSSPSSTSITTTSSWSAQAADATDLQDLSAPTPAEKEAARVKAKLKRQQEALIMENAAKGGGDEKNYGDSLKREREKQRMLKKDAKQRRQDLCEQLGRGC
Sbjct:    1 MQHHQTSVTWVVFLSCILLLGQVPAFVRCPKPTQIHVGGVSMQRCCTALTSSSSSSSSPRSSSSSPPSTHRNPPSFVLRRTFGLLTSVAAFFLAPTSFPPSSPSSTSITTTSSWSAQAADATDLQDLSAPTPAEKEAARVKAKLKRQQEALIMENAAKGGGDEKNYGDSLKREREKQRMLKKDAKQRRQDLCEQLGRGC 199
The following BLAST results are available for this feature:
BLAST of EWM21390.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101607|gb|EWM21390.1|2.666e-158100.00hypothetical protein Naga_100215g10 [Nannochlorops... [more]
gi|553187897|ref|XP_005854702.1|1.608e-14199.50hypothetical protein NGA_0349102 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9315rna9315Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications