rna9315, rna9315 (mRNA) Nannochloropsis gaditana

Overview
Namerna9315
Unique Namerna9315
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1239
Alignment locationKK037252.1:364969..366681 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100215g10.1632.mrna
Orig protein idgnl|cribi|Naga_100215g10.1632
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:364969..366681 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100215g10gene9031Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9315rna9315-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21390.1cds9285Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9315 ID=rna9315|Name=rna9315|organism=Nannochloropsis gaditana|type=mRNA|length=1239bp
ATGGCCTGCGTACTTTCCACGGGGCTCGTGCACGTCTTTCAAGAGGGGCA
AGGGGCACTTTTTGGGGACAAGCCTCATGAGGAGCACTGGCTCGTGGACC
CTGTGTGCAGTTTTCACGAACCCGCTCTCTCAGATACCCGGCAGCTGGTT
TTACTTCGGACTGCCCCTGAATTAGGACCGGAGGGAGGAGAGGAAGAAAC
ACCGGAGGAATTTTCTCTGTTGACAGTGCGGTGGGACGAGGAGCGGCAGA
GCGACGTATTGGTGGAGGTGACGTTTGCAATCCCTTCCTCGGCCATCCCA
AGCCTTTCGTCCTCCCGTTCCCCTTCCTCGACGATTGTCATCACCAGTCT
CGATGAGGCGGGAGTGGCGTCCGATGAAGAAAATATAGCACGTGAAGACG
TCAGCACAAGTGCGCAGAGGTCAGGGCATCCTTTGGATTCCTCACGAATT
TTGCGGTTGCAGGCATGGGGAGGTTGGAAGGGGAATGCTGCTTTGATCGA
AACGCACGAGGGAGCCATTTACAAATACACGCGAAGACGAGGATTAAAGA
AAGGAGGAAAGGAAGCGCATCGGTCGATCACATGGATCATGGACATGTTG
GAGCCGTGCCCGTGGGTGGGTGTGGTAAATGTGGGAGGGAAGAAGGAGGG
AGGAGGGGGAGGGGAGGTTGGGCGGGGGGAGGTGGTGGGACTCTCCACGC
GTGCACGTCTCTATTACGGAGAGCACCTTTTGTGCAATGCGGTGGCTTCC
GTGACAGTTAATCCTGCGTTTGGTATGCTCATGTACGTCACTTTGGGCTC
CCAACCGACTTTACGGTTTGTGACCTTTCGGAGCCTTGCCGGCCTTGACG
TGATGGGAGGGAGCGAGGGGGGGGTAGTGGAATGCCCCACGGAGGGCCGA
CCGGTGGAACGAGGGTCCCGCCTGATTATGTCCTCCTTCACGTCTTCCAC
CGTGCTTCTGCAACTCCCTCGCGGCAACCTGGAAGTGGCCGCGCCCCATC
CTTTGGTCTTGCATCAAGCTGCCCGTCTCCTGGAGGTGGGGAGGTACGGG
CAGGCTTTCTCACTCCTTCGGCGGCATCGTTTGGACTTGAATTTTATGAT
CGATTTCGCCCCTCGGAAATTTTTGGAGGAGGTGGAACGGTTGGTAGTGC
CTCAATTTGGGAAGCTGGAGGATTTGAACGTCTTTGTCTCGGCTGTGCGG
GACGGAGATTGTGTTGGGGGAGGTTCCTCCTCGCTTTGA
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protein sequence of rna9315

>rna9315-protein ID=rna9315-protein|Name=rna9315|organism=Nannochloropsis gaditana|type=polypeptide|length=218bp
MSRGGHKRLSHCGVSFPPDMQHHQTSVTWVVFLSCILLLGQVPAFVRCPK
PTQIQVGGVSMQRCCTALTSSSSSSSSPRSSSSSPPSTHRNPPSFVLRRT
FGLLTSVAAFFLAPTSFPPSSPSSTSITTTSSWSAQAADATDLQDLSAPT
PAEKEAARVKAKLKRQQEALIMENAAKGGGDEKNYGDSLKREREKQRMLK
KDAKQRRQDLCEQLGRGC
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mRNA from alignment at KK037252.1:364969..366681-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9315 ID=rna9315|Name=rna9315|organism=Nannochloropsis gaditana|type=mRNA|length=1713bp|location=Sequence derived from alignment at KK037252.1:364969..366681- (Nannochloropsis gaditana)
ATGATGGGACAGAAGGACAGAGGAACACAAAAAGGGAACAAGACGACGCG
GGTAGCCAAGCCGTGTATCGAAGTCTGCGGGATGATCGGTGCGAGTCTTT
CCGCAGGGTACCGTCCATGTCACGTGGAGGTCATAAAAGGTGTTTTGTTT
GCTTGGGTGGGGTGTCGAAACCCGATGCTCACGATGCGACTCTCTTTCCC
AATGGTATTTTGTACTTTAAATTTTAGTTTTGCAAGACATTGAGCTTATA
ATAACTTGGCTTACCTTTTTCATTTTTTTCTCGGATTTCTGGACAGGTTG
TCACATTGTGGGGTTAGTTTTCCTCCAGACATGCAGCATCATCAGACCTC
CGTGACGTGGGTGGTTTTCCTCTCTTGTATACTGCTCTTGGGTCAAGTTC
CGGCCTTTGTGCGGTGTCCAAAGCCCACACAAATCCAAGTTGGTGGCGTT
TCAATGCAAAGGTACGGTTTTTCCTTTTACATATTGTGTTTGGGGTCACT
TTGTGGTCGATTCGTTCGTCCTCAGAATGTAGTCGATTCGTATGAGGAAG
TATAGCTCTTGTCAAAACCTGCGGTGGGAAAGTGCAGCTATGGAGACTTT
GAAGCCCCTCATAATTTCATAAGCATGTGTTGCATTTGAGTCTTCTTTTT
CCCCTATTGAAGGCCAAGCCCTGCTCGAGTGAACCTGATCTCTGCCTTCT
ACAACTTCAACGTGTGCCCTCTCTCCACCCTCCACCTATCGTGTGGCCCT
TGCACCCAGCCTTTGATGCCACTACGAAGCAAATGAGCTCATATATATGA
TCTTTCCTTTCTTGTGTGAACCAGTTCATGTAATATCATATCTTTTATTT
GCAACAAATCAACTCCCTCCTCTCTGGTTCCTTCCAGGTGCTGTACCGCT
CTCACCTCGTCGTCGTCGTCCTCCTCCTCTCCCCGTTCCTCCTCCTCGTC
TCCTCCCTCGACCCATCGCAATCCCCCCTCTTTCGTCCTGCGCCGCACGT
TCGGTCTCCTCACAAGCGTCGCCGCCTTCTTTCTTGCCCCTACCTCCTTC
CCTCCCTCCTCCCCTTCTTCCACTTCCATCACCACAACTTCCTCCTGGTC
GGCGCAGGCGGCCGACGCCACGGACCTGCAAGATCTGTCGGCTCCCACAC
CGGCGGAAAAAGAAGCAGCGAGGGTCAAGGCCAAATTGAAACGACAACAG
GAGGCCCTGATCATGGAGAATGCCGCAAAAGGGGGCGGGGACGAGAAGAA
TTACGGAGATTCATTGAAGAGGGAGAGGGAGAAGCAGCGGATGCTGAAGA
AGGATGCGAAGCAACGTAGGCAGGACTTGTGTGAGCAGCTGGGACGGGGT
TGCTAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGGT
GGCTTAGCGTCCGAAAGGGTTATTGGTGCTCTGCGACAAATGAAAGGGGT
GGGGATGGATGCTGGAGAGGGCAAAGGAAGGAGAGGAAGAGGGAGATGTG
GAAAAGAGGGTCCTGAACAGCCGCAGATTCGGCCGGGAGCGTGGCTTGGT
GGAGGGGAAAAATTACCGAAACGGGAATTCGAAAATTTAAAATTCACATG
GCTGTCTGAGTCCGACCCAGGGCAACACGGAAGTGTTTTTTTTGGATACT
TTTTAAAAATGTTCCTTTTAATGCAAACATCTTCAGCATCCCCTATTCGG
ACGTGCTTTTGCT
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Coding sequence (CDS) from alignment at KK037252.1:364969..366681-

>rna9315 ID=rna9315|Name=rna9315|organism=Nannochloropsis gaditana|type=CDS|length=1971bp|location=Sequence derived from alignment at KK037252.1:364969..366681- (Nannochloropsis gaditana)
GTGCTGTACCGCTCTCACCTCGTCGTCGTCGTCCTCCTCCTCTCCCCGTT
CCTCCTCCTCGTCTCCTCCCTCGACCCATCGCAATCCCCCCTCTTTCGTC
CTGCGCCGCACGTTCGGTCTCCTCACAAGCGTCGCCGCCTTCTTTCTTGC
CCCTACCTCCTTCCCTCCCTCCTCCCCTTCTTCCACTTCCATCACCACAA
CTTCCTCCTGGTCGGCGCAGGCGGCCGACGCCACGGACCTGCAAGATCTG
TCGGCTCCCACACCGGCGGAAAAAGAAGCAGCGAGGGTCAAGGCCAAATT
GAAACGACAACAGGAGGCCCTGATCATGGAGAATGCCGCAAAAGGGGGCG
GGGACGAGAAGAATTACGGAGATTCATTGAAGAGGGAGAGGGAGAAGCAG
CGGATGCTGAAGAAGGATGCGAAGCAACGTAGGCAGGACTTGTGTGAGCA
GCTGGGACGGGGTTGCTAGGTTGTCACATTGTGGGGTTAGTTTTCCTCCA
GACATGCAGCATCATCAGACCTCCGTGACGTGGGTGGTTTTCCTCTCTTG
TATACTGCTCTTGGGTCAAGTTCCGGCCTTTGTGCGGTGTCCAAAGCCCA
CACAAATCCAAGTTGGTGGCGTTTCAATGCAAAGATGTCACGTGGAGGTC
ATAAAAGGTGCTGTACCGCTCTCACCTCGTCGTCGTCGTCCTCCTCCTCT
CCCCGTTCCTCCTCCTCGTCTCCTCCCTCGACCCATCGCAATCCCCCCTC
TTTCGTCCTGCGCCGCACGTTCGGTCTCCTCACAAGCGTCGCCGCCTTCT
TTCTTGCCCCTACCTCCTTCCCTCCCTCCTCCCCTTCTTCCACTTCCATC
ACCACAACTTCCTCCTGGTCGGCGCAGGCGGCCGACGCCACGGACCTGCA
AGATCTGTCGGCTCCCACACCGGCGGAAAAAGAAGCAGCGAGGGTCAAGG
CCAAATTGAAACGACAACAGGAGGCCCTGATCATGGAGAATGCCGCAAAA
GGGGGCGGGGACGAGAAGAATTACGGAGATTCATTGAAGAGGGAGAGGGA
GAAGCAGCGGATGCTGAAGAAGGATGCGAAGCAACGTAGGCAGGACTTGT
GTGAGCAGCTGGGACGGGGTTGCTAGGTTGTCACATTGTGGGGTTAGTTT
TCCTCCAGACATGCAGCATCATCAGACCTCCGTGACGTGGGTGGTTTTCC
TCTCTTGTATACTGCTCTTGGGTCAAGTTCCGGCCTTTGTGCGGTGTCCA
AAGCCCACACAAATCCAAGTTGGTGGCGTTTCAATGCAAAGATGTCACGT
GGAGGTCATAAAAGGTGCTGTACCGCTCTCACCTCGTCGTCGTCGTCCTC
CTCCTCTCCCCGTTCCTCCTCCTCGTCTCCTCCCTCGACCCATCGCAATC
CCCCCTCTTTCGTCCTGCGCCGCACGTTCGGTCTCCTCACAAGCGTCGCC
GCCTTCTTTCTTGCCCCTACCTCCTTCCCTCCCTCCTCCCCTTCTTCCAC
TTCCATCACCACAACTTCCTCCTGGTCGGCGCAGGCGGCCGACGCCACGG
ACCTGCAAGATCTGTCGGCTCCCACACCGGCGGAAAAAGAAGCAGCGAGG
GTCAAGGCCAAATTGAAACGACAACAGGAGGCCCTGATCATGGAGAATGC
CGCAAAAGGGGGCGGGGACGAGAAGAATTACGGAGATTCATTGAAGAGGG
AGAGGGAGAAGCAGCGGATGCTGAAGAAGGATGCGAAGCAACGTAGGCAG
GACTTGTGTGAGCAGCTGGGACGGGGTTGCTAGGTTGTCACATTGTGGGG
TTAGTTTTCCTCCAGACATGCAGCATCATCAGACCTCCGTGACGTGGGTG
GTTTTCCTCTCTTGTATACTGCTCTTGGGTCAAGTTCCGGCCTTTGTGCG
GTGTCCAAAGCCCACACAAATCCAAGTTGGTGGCGTTTCAATGCAAAGAT
GTCACGTGGAGGTCATAAAAG
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Synonyms
Publications