rna9266, rna9266 (mRNA) Nannochloropsis gaditana

Overview
Namerna9266
Unique Namerna9266
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2465
Alignment locationKK037252.1:240052..241557 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100307g6.2282.mrna
Orig protein idgnl|cribi|Naga_100307g6.2282
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:240052..241557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100307g6gene8988Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21437.1cds9236Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9266rna9266-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9266 ID=rna9266|Name=rna9266|organism=Nannochloropsis gaditana|type=mRNA|length=2465bp
AACGCGGGTCAGGAATTTTCCGGGGAGGAGGGGGAGGAGGAGGAGGAGGA
AGAAGAGATGGTGGAGGAGGAGGGCCGGGACAACGGGCGAGGAGAGGATG
GTGACGACGGTGGGGGCAGTCCGGGTGGCGCAAGCAGTCATGAGCAAGGG
GCAGAGGAGGATATGAAGCCGCCGACGGGCTCGTCGGAGGGAGAAGGTCG
GCGCGATGGGCAGCAGGAGGACAAGGGCCAGCGAAAGGGGGAGGGAAAAG
AAGGGGAGAAGGACGGGGAGGAGGACGACGCCCTGGCCGCGGACGCGACA
TTGAGCAAGATGAAGCTTTCCACCAACTTTGGGGCGCCTCTGGGAGCAGC
GGGGGTAGGGGGCGAGGAGGGAGGAAGCGGGGGAGGGAGCCCGGCCACGC
CCGTGGGGCTAGGTTTGAGAAGCCGGGAGGGAATGGGCAGCAACGGCAAA
GTGAACGGAGTGGCCTTCTCCCCCACGCCCGCCACGCCTCAAAATAGGCG
CACGGACATGATGGACTCGACGGCGCTGAGCTCGTTGATCACCAGCACGG
CCTCGGGCTCGGACGGCAACAACCTGATCGAGCTGGCCCGCATCCACCAA
CGCATCGTGGACCTGGAGGCGAAGGCGGAGCAAGTGAGCAGCATGCACCG
ACAGCTTCAGAAGGAACAGGACCGGACCCGCCGGGCGGAAGCGGCCATGC
AAGAACTCTCGCACGAACTCGACGCCCTGCGGCGGGAAAATGCCCACCTG
CGAATGGAGCTGGATGGCTGGCATCACCGCGAGGGTCACGCTCAAATGAT
GGCCGCAGCCCACCACCACCACCACCACCACCACCACCAGCACCAGCAGC
AGCTTCACATGCAGCAGCAGCAGCAACAACAACAACACTCGGCGGCCCCG
GCTCCCGCGGCGGGAGAAGCAATGGAGGCGGGGCCCGCGGCCGGGAAGGA
GGGAGAGGTGGTGGGTACCGAGGGCGAGAAATGCGAAGGGAAGGAGAGGC
AGAGCGGCGAAGGGAAGGAAGCGCATTTGGTGGCGGCCGAGCTCCTTGTG
GAGGCGGCAGCGGCTGAGAAAGACAAGCGGGTGCGATCCGATTCCATAAC
CAAGGGTGCTGAGCTTCTGGGGGGTTTCAAAAAACAGCGAGTAGAGAGCC
CTGGCCTCTCTATCTCCACAGAAGGACGAGAAGGGGTTGGAGATGGAGGA
GAGAAGGAGGGCAGCGGCGTGGCGACTGTGCAAAAAGAGGCTGACAAGGA
GGGAGCAAAGGCGGTGGAGAAGAAGGAGATCCACACGGGGGTCTACGGGG
AGGGTTACGAGACCCCTCGCAACACCATTAAGCAGTCCCCCATCGCCCTG
TAAGGGTTAGATGGCCACCACGATTGTTCTGCAGAGGAGGAGAGGAAGAC
AAGGGTTGGAGTGACCGAGGAGAAGCAGAGGCGCCGGTCGGGCGCTTTGT
CTTTCTTCGGAACGAACATTCTTTATGATCATAATCGAATGGAAAAAGTT
GCGATGTTAAGATATGCGGTCAGATAATTGCCGTACTACGAGGGAAAGAA
CGGGCGTGAAAGACAACATTTTGTGGTTATACTGACTTGAGACGATGTAG
AGGAGGAAGGAAAAGAGACTGAGAATTACCAAGAGCCTGGCGGCAACCGA
CACCAGAGAAAAAGACGACGCTTGGAAGGCAGTGGAAAGGACGCAGTGAT
GACCCTTCACATTCCGGGAAGCAGCAAAAGCGGGTGGTTGAAGTGAAAGC
GCAAATGTAGTCACGGAGGCGCATTCCTCTACCCGGTGTGGCTCAGCCCG
TAATCAACGAAGGTGGGTGAAGAGGTGGCCAATTAGTTGATATCGGGGAG
CGAGGGTTCACGAGAGCAGAGTGGCGTTATTTAACGAGCACCAGAGGAGC
CTGGGTCATGTGCGAGCAGGGAAATTCGGGTCTGGAGGAAACACAGGCAT
AAGCGATGACGACAGAAACGAAGGCCACATGGGGAATCTCCTAGTATCTT
CCGCTCGCCACCACTTTCCAATGTGCGGTAGCATGCGAGGGGCACTACAA
AAAGAGGGCCTAACAACAAGACGCAATAGTGCGAGTGAGTGCGAATTTGT
GTCCGACATTTTTACATAAGTCAAATCAACATCATATCTGCGGTGACGTT
TCCAAAATGATTCTATGATGCGTCCTGTGGTCGTAGCGCGGAATTATCGC
GGGCAGCTGCACGTTGGTTGCACAGCCTCACCCCATTGGGATAGAGACTT
GACGGAGGGGGTCGTGCGATATAGGTTACCAGCCGCTTTGACCTTCAAGA
TTGAGAAGGAAAGGCAGCAGGGACTCGAAACACAGTAAGGCGAAAACAAG
CGTGTCAACGTTAAGCTGGACGTCGCAAAAGTTGAACGGGAGGAAGGGCA
ACACAATTATTTTTCACCGTAAGGAAAAACCACGTGAGACATCCTCTGCT
CTGTACACTATCTTT
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protein sequence of rna9266

>rna9266-protein ID=rna9266-protein|Name=rna9266|organism=Nannochloropsis gaditana|type=polypeptide|length=281bp
MAGRSAKYSMGRRDEAPFLYGSMPPPPHAGAPPPYASGYEGSPGNNFGVP
PDGSGSPPPPSPLAAPRRSPGGDVKSTPPPMPAILNADDQGGVSAASNGI
GADEGGAGLPSPWETLNKHQSHRITNIPPYSSLTKKEAPMYEELINFPRA
KDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCK
GCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDGEDASHHLGHAP
HHRHHHPHPPVPPPHPHMPHHMPPFPHGPPP
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mRNA from alignment at KK037252.1:240052..241557-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9266 ID=rna9266|Name=rna9266|organism=Nannochloropsis gaditana|type=mRNA|length=1506bp|location=Sequence derived from alignment at KK037252.1:240052..241557- (Nannochloropsis gaditana)
GGGATGACAACAGTATCTTTCCTTCCCACCCGCCGCATGTGTGTCTATGG
CCGTAGTGCTCCTTTCTCCACTCGCTCGCTCCCTTTGGAGAGCTGTGTTA
CACTTGAGAAAGCACAGCCATGCCGATCTGAGGGGCCGTGCACGGTGTGG
CTACGCGTGGACGCTGTGATTTTGGGGGACATACACATGCCCGCGGGGCT
CTGAGAGAACTCTGCAGTTGAGACAACCAGTGAATGCTTAGGGAATGCAC
TTTTGCCGGAAAGGACGTGCCCCCCACCTAGCGACGGGACGTGGCACAGG
CGAGGTTGCCGCCGCTTAAAGGAAGCCCTCTCGCTTTCCAGTTGTTGGAG
AAAGCCTCACTGAATGTGTCCCCATGTTTGAGTTGTTACGCTTGTGTGTC
GCGTTTACCGGGACTCCACTGGTCGTCAGGCCCGAAAGAACATCCGATGC
CGCCTCACTTCCCATGGACTTAAACCACCCTCTCCCCTCCCACTCTCCAA
CCCTCCTTCCACCTCTCAGGAGACTACACACACGTCTCAGTGTCAGGTGC
ACGTGGTAAATCCACTTGGAAAGGTGTACATCGAACGACAGGGAGGAAGC
GGCCAGTGAGAGCAGTCCTTCCCCCAGCGTCTACCACCTTACGCGCTGCT
TTTTAAGGTCTCGATGGCCGGACGAAGCGCCAAGTACAGCATGGGGCGAC
GCGACGAGGCCCCCTTCTTGTACGGGAGCATGCCGCCCCCACCGCACGCA
GGTGCACCACCTCCCTACGCGAGTGGCTACGAGGGATCTCCTGGAAACAA
CTTCGGCGTGCCCCCCGACGGGAGCGGGTCTCCCCCCCCTCCCTCCCCTC
TTGCCGCCCCGCGCCGTTCTCCCGGGGGGGATGTCAAGTCCACCCCTCCT
CCAATGCCGGCCATATTGAACGCGGACGACCAGGGCGGTGTGAGTGCCGC
CAGCAATGGGATAGGCGCCGACGAAGGCGGGGCCGGCCTGCCCTCCCCGT
GGGAGACGCTGAACAAGCACCAGTCGCACCGCATCACCAACATCCCCCCT
TACTCCTCCTTGACGAAGAAAGAGGCGCCAATGTACGAAGAACTGATCAA
CTTCCCGAGGGCCAAGGATAAGGACGACATGCGTTGTGTCATGTGCGGGC
TGCCGCCCGGGGAGCACTGCGTCATCCCCCGTCAGAACAAGGACGTCTGC
AAGGACTGCGACAAGGCCACCTGGCAGCACGCCGATACTCAGGTCTACTT
CAAGTGGTGCAAGGGCTGCAAGAAATTTCTGAAGCTCTCCTCCTTCTCTC
AGAAGCTGGACGCGGCGAAGTGCGACAAGTGCCGCGAGCGGGGCCGGCAG
TCGTATCTGGCGAAGAAGGGGAAAGACGGCGAGGATGCCTCCCACCATCT
AGGGCACGCCCCTCACCACCGGCACCACCACCCGCATCCCCCGGTGCCTC
CCCCCCACCCGCACATGCCGCACCACATGCCTCCCTTCCCCCACGGCCCC
CCTCCT
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Coding sequence (CDS) from alignment at KK037252.1:240052..241557-

>rna9266 ID=rna9266|Name=rna9266|organism=Nannochloropsis gaditana|type=CDS|length=843bp|location=Sequence derived from alignment at KK037252.1:240052..241557- (Nannochloropsis gaditana)
ATGGCCGGACGAAGCGCCAAGTACAGCATGGGGCGACGCGACGAGGCCCC
CTTCTTGTACGGGAGCATGCCGCCCCCACCGCACGCAGGTGCACCACCTC
CCTACGCGAGTGGCTACGAGGGATCTCCTGGAAACAACTTCGGCGTGCCC
CCCGACGGGAGCGGGTCTCCCCCCCCTCCCTCCCCTCTTGCCGCCCCGCG
CCGTTCTCCCGGGGGGGATGTCAAGTCCACCCCTCCTCCAATGCCGGCCA
TATTGAACGCGGACGACCAGGGCGGTGTGAGTGCCGCCAGCAATGGGATA
GGCGCCGACGAAGGCGGGGCCGGCCTGCCCTCCCCGTGGGAGACGCTGAA
CAAGCACCAGTCGCACCGCATCACCAACATCCCCCCTTACTCCTCCTTGA
CGAAGAAAGAGGCGCCAATGTACGAAGAACTGATCAACTTCCCGAGGGCC
AAGGATAAGGACGACATGCGTTGTGTCATGTGCGGGCTGCCGCCCGGGGA
GCACTGCGTCATCCCCCGTCAGAACAAGGACGTCTGCAAGGACTGCGACA
AGGCCACCTGGCAGCACGCCGATACTCAGGTCTACTTCAAGTGGTGCAAG
GGCTGCAAGAAATTTCTGAAGCTCTCCTCCTTCTCTCAGAAGCTGGACGC
GGCGAAGTGCGACAAGTGCCGCGAGCGGGGCCGGCAGTCGTATCTGGCGA
AGAAGGGGAAAGACGGCGAGGATGCCTCCCACCATCTAGGGCACGCCCCT
CACCACCGGCACCACCACCCGCATCCCCCGGTGCCTCCCCCCCACCCGCA
CATGCCGCACCACATGCCTCCCTTCCCCCACGGCCCCCCTCCT
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Synonyms
Publications