EWM21437.1, cds9236 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|585101666|gb|EWM21437.1| (hypothetical protein Naga_100307g6, partial [Nannochloropsis gaditana]) HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 Query: 1 MAGRSAKYSMGRRDEAPFLYGSMPPPPHAGAPPPYASGYEGSPGNNFGVPPDGSGSPPPPSPLAAPRRSPGGDVKSTPPPMPAILNADDQGGVSAASNGIGADEGGAGLPSPWETLNKHQSHRITNIPPYSSLTKKEAPMYEELINFPRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDGEDASHHLGHAPHHRHHHPHPPVPPPHPHMPHHMPPFPHGPPP 281 MAGRSAKYSMGRRDEAPFLYGSMPPPPHAGAPPPYASGYEGSPGNNFGVPPDGSGSPPPPSPLAAPRRSPGGDVKSTPPPMPAILNADDQGGVSAASNGIGADEGGAGLPSPWETLNKHQSHRITNIPPYSSLTKKEAPMYEELINFPRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDGEDASHHLGHAPHHRHHHPHPPVPPPHPHMPHHMPPFPHGPPP Sbjct: 1 MAGRSAKYSMGRRDEAPFLYGSMPPPPHAGAPPPYASGYEGSPGNNFGVPPDGSGSPPPPSPLAAPRRSPGGDVKSTPPPMPAILNADDQGGVSAASNGIGADEGGAGLPSPWETLNKHQSHRITNIPPYSSLTKKEAPMYEELINFPRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDGEDASHHLGHAPHHRHHHPHPPVPPPHPHMPHHMPPFPHGPPP 281
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|553180988|ref|XP_005853494.1| (hypothetical protein NGA_0434100, partial [Nannochloropsis gaditana CCMP526] >gi|422295568|gb|EKU22867.1| hypothetical protein NGA_0434100, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 479.559 bits (1233), Expect = 2.549e-170 Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0 Query: 10 MGRRDEAPFLYGSMPPPPHAGAPPPYASGYEGSPGNNFGVPPDGSGSPPPPSPLAAPRRSPGGDVKSTPPPMPAILNADDQGGVSAASNGIGADEGGAGLPSPWETLNKHQSHRITNIPPYSSLTKKEAPMYEELINFPRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDGEDASH 244 MGRRDEAPFLYGSMPPPPHAGAPPPYASGYEGSPGNNFGVPPDGSGSPPPPSPLAAPRRSPGGDVKSTPPPMPAILNADDQGGVSAASNGIGADEGGAGLPSPWETLNKHQSHRITNIPPYSSLTKKEAPMYEELINFPRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDGEDAS Sbjct: 1 MGRRDEAPFLYGSMPPPPHAGAPPPYASGYEGSPGNNFGVPPDGSGSPPPPSPLAAPRRSPGGDVKSTPPPMPAILNADDQGGVSAASNGIGADEGGAGLPSPWETLNKHQSHRITNIPPYSSLTKKEAPMYEELINFPRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDGEDASR 235
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|1200678304|gb|OUX73164.1| (hypothetical protein CBC49_12220, partial [Alphaproteobacteria bacterium TMED89]) HSP 1 Score: 126.331 bits (316), Expect = 1.708e-32 Identity = 64/106 (60.38%), Postives = 72/106 (67.92%), Query Frame = 0 Query: 141 YEELINFPRAKDKDDMR-CVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDA----------AKCDKCRERGRQSYLAKK 235 Y+EL+NF RAKDK +R CVMCG GE C IP QNKDVCKDCD W+HA T YF+WCKGCKKFL + SF+ KL AKCD CR RGRQSYL K+ Sbjct: 43 YDELVNFDRAKDKKSVRRCVMCGKHSGE-CCIPLQNKDVCKDCDSECWRHAPTGTYFRWCKGCKKFLHVVSFAAKLHEVGLSALDKAPAKCDSCRARGRQSYLMKR 147
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|676387311|ref|XP_009036934.1| (hypothetical protein AURANDRAFT_71640 [Aureococcus anophagefferens] >gi|323452327|gb|EGB08201.1| hypothetical protein AURANDRAFT_71640 [Aureococcus anophagefferens]) HSP 1 Score: 108.612 bits (270), Expect = 8.039e-23 Identity = 55/107 (51.40%), Postives = 70/107 (65.42%), Query Frame = 0 Query: 138 APMYEELINF-PRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKL----DAAKCDKCRERGRQSYLAKKGKDG 239 P Y L+NF PRA + CVMCG E ++P+QNKDVC++CDKATW+HA T YFKWCKGCK F + +F++ +A+KCDKCR R R Y K+GKD Sbjct: 262 VPSYCALVNFGPRALPRVGAHCVMCGR---EGVLMPKQNKDVCRECDKATWKHAATGCYFKWCKGCKNFHAIDAFAEAFADMRNASKCDKCRRRSRNCY--KRGKDA 363
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|223999067|ref|XP_002289206.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974414|gb|EED92743.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 85.5001 bits (210), Expect = 4.497e-15 Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0 Query: 170 VIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGK 237 +IPRQNK++C CD W D + KWCKGCK F + +SF +K A KC KCRER ++ Y ++KG+ Sbjct: 667 IIPRQNKELCTSCDVKVWLVRDLNLTIKWCKGCKNFRQWASFGEKSRATKCTKCRERQKEKYASQKGE 734
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|397617822|gb|EJK64626.1| (hypothetical protein THAOC_14623 [Thalassiosira oceanica]) HSP 1 Score: 80.8777 bits (198), Expect = 1.148e-13 Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 0 Query: 137 EAPMYEELINFPRAKDKDDMRCVMCGLPPGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKK 235 E P ++ L NFP ++ + RCVMC IP+QNK VC +CD A W H + + KWCKGCK F K S F K ++K ++CR++ + Y K Sbjct: 271 EMPPFKALENFPSSRAQG--RCVMCD---SAEFNIPKQNKGVCNNCDIAIWVHNPSGLLLKWCKGCKNFRKWSDFGLKGHSSKTERCRQQQAERYARSK 364
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|1210529266|dbj|GAX12108.1| (hypothetical protein FisN_15Lh199 [Fistulifera solaris]) HSP 1 Score: 75.8702 bits (185), Expect = 8.354e-12 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 0 Query: 138 APMYEELINFPRAKDK-------DDMRC-VMCG--------------------LP-PGEHC--------VIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSY-LAKKGKD 238 P + L+NFP + D MRC VMCG LP EH +IP QNK +C CD W + + KWCKGCK F ++F K A KC +CRER R+ Y L K+ KD Sbjct: 705 VPEFTSLVNFPSHMSQKQAVNLPDGMRCCVMCGQACPCSTGNKGKKGKSKEGGLPNQNEHLSDKNSGYAIIPSQNKGLCTHCDVNVWVVVTSGLEIKWCKGCKNFRPWAAFGDKGLATKCLRCRERQREKYALQKEEKD 843
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|1210528523|dbj|GAX12720.1| (hypothetical protein FisN_15Hh199 [Fistulifera solaris]) HSP 1 Score: 75.8702 bits (185), Expect = 8.396e-12 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 0 Query: 138 APMYEELINFPRAKDK-------DDMRC-VMCG--------------------LP-PGEHC--------VIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSY-LAKKGKD 238 P + L+NFP + D MRC VMCG LP EH +IP QNK +C CD W + + KWCKGCK F ++F K A KC +CRER R+ Y L K+ KD Sbjct: 720 VPEFTSLVNFPSHMSQKQAVNLPDGMRCCVMCGQACPCSTGNKGKKGKSKEGGLPNQNEHLSDKNSGYAIIPSQNKGLCTHCDVNVWVVVTSGLEIKWCKGCKNFRPWAAFGDKGLATKCLRCRERQREKYALQKEEKD 858
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|1072234272|gb|OEU19002.1| (hypothetical protein FRACYDRAFT_237294 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 74.7146 bits (182), Expect = 2.400e-11 Identity = 44/143 (30.77%), Postives = 59/143 (41.26%), Query Frame = 0 Query: 133 LTKKEAPMYEELINFPRAKDK-------DDMRC-VMCGLP--------------------------------PGEHCVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKK 235 L P + L+NFP + + MRC VMCG G + +IP QNK +C CD W A++ + KWCKGCK F ++F K A KC +CRER R+ Y +K Sbjct: 887 LKGATVPEFTSLVNFPVHMSQKQAVNLPEGMRCCVMCGSACPCSNGNKKKCNGPLGGKKDSRSANGQNMAGDKGGYAIIPTQNKGLCTLCDVNVWVVANSGLEIKWCKGCKNFRPWAAFGDKGLATKCLRCRERQREKYALQK 1029
BLAST of EWM21437.1 vs. NCBI_GenBank
Match: gi|1210530213|dbj|GAX11129.1| (hypothetical protein FisN_9Hh221 [Fistulifera solaris]) HSP 1 Score: 73.1738 bits (178), Expect = 4.523e-11 Identity = 47/133 (35.34%), Postives = 57/133 (42.86%), Query Frame = 0 Query: 139 PMYEELINFPR-----------AKDKDDMRCVMCG-LPP------------------GEHCVIPRQNKDVCKDCDKATWQHAD------TQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKK 235 P + +L+NFP A CVMCG L P G +IPRQNK VC CD A W A T + KWCKGCK F ++F K A KC +CR R ++ Y A K Sbjct: 333 PEFSQLVNFPDYLARGREGKTGAAATGQKNCVMCGKLRPCSASTMNRRGSTDGGEDDGAMHIIPRQNKGVCTACDVAVWAVAGAKLEDGTPIEIKWCKGCKNFRPWAAFGDKGMATKCVRCRTRQKEKYAAAK 465 The following BLAST results are available for this feature:
BLAST of EWM21437.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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