EWM21448.1, cds9211 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|585101678|gb|EWM21448.1| (Golgin subfamily A member 7/ERF4 [Nannochloropsis gaditana]) HSP 1 Score: 318.161 bits (814), Expect = 5.406e-110 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query: 1 MVFNAPRRAPPESLARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGPEGDREER 155
MVFNAPRRAPPESLARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGPEGDREER
Sbjct: 1 MVFNAPRRAPPESLARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGPEGDREER 155
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|669147458|ref|XP_008609291.1| (hypothetical protein SDRG_05356 [Saprolegnia diclina VS20] >gi|530738887|gb|EQC37129.1| hypothetical protein SDRG_05356 [Saprolegnia diclina VS20]) HSP 1 Score: 113.62 bits (283), Expect = 3.684e-29 Identity = 51/138 (36.96%), Postives = 77/138 (55.80%), Query Frame = 0
Query: 14 LARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGPEGD 151
+A P + L +RF+NGVS +YD FP L +++ E+ F AI ++NN L YWPC C GY T GLSL CP +C+ +AE++ + ++++NH F+ +G+ W K +SWI I P +GD
Sbjct: 1 MAMPGRTTVRLMPAHMRFVNGVSRAYDDEFPHELRHLVDETQFSHAINQINNTLTDYWPCLFCVCYGYACCVCTGGLSLLCPHMCISDAEQYARTLIDRINHRPCFQDVGVEWKFVKRCGRSWIEISFPTTNYSKKGD 138
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|673050465|ref|XP_008879193.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574465189|gb|ETV92229.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 112.464 bits (280), Expect = 1.378e-28 Identity = 50/137 (36.50%), Postives = 80/137 (58.39%), Query Frame = 0
Query: 10 PPESLARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAE 146
P + AR + L + FI+G+++ YD FP L+ +++E+ F +AI ++NN L YWPC C CGY+ T GLSL CP +C+ +AE++ + +E++N F+ + W L K +SWI I LP+K +
Sbjct: 3 PTMTAARKDRSRVFLMPQRMPFISGITNRYDDDFPIELDGLVTEAQFSQAINQINNTLTDYWPCLFCVCCGYLCCVCTAGLSLLCPNMCISDAEQYTRTLIERINARPCFKDADVEWKLVKKCCRSWIEISLPIKFD 139
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|813132792|ref|XP_012197764.1| (hypothetical protein SPRG_19510 [Saprolegnia parasitica CBS 223.65] >gi|641537763|gb|KDO31607.1| hypothetical protein SPRG_19510 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 111.309 bits (277), Expect = 3.573e-28 Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 0
Query: 14 LARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELP 142
+A + L +RF+NGVS +YD FPP L +++ E+ F AI ++NN L YWPC C GY T GLSL CP +C+ +AE++ + ++++NH F+ +G+ W K +SWI I P
Sbjct: 1 MAMAARTTVRLMPAHMRFVNGVSRAYDDEFPPELRHLVDETQFTHAINQINNTLTDYWPCLFCVCYGYACCVCTGGLSLLCPHMCISDAEQYARTLIDRINHRPCFQDVGVEWKFVKRCGRSWIEISFP 129
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|695393149|ref|XP_009520535.1| (hypothetical protein PHYSODRAFT_482152 [Phytophthora sojae] >gi|348685432|gb|EGZ25247.1| hypothetical protein PHYSODRAFT_482152 [Phytophthora sojae]) HSP 1 Score: 109.383 bits (272), Expect = 1.988e-27 Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 0
Query: 24 LRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGP 148
L T +RF+ GV+ +Y+ FPP L +++ E+ F AI ++NN + YWPC C CGY P TLGLSL CP C+ +AE++ + L ++N F +G+ W L +S +SWI I P+ + P
Sbjct: 36 LYPTRMRFVTGVARAYEDDFPPELSHLVKETDFEIAINQINNTMQDYWPCFFCIFCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALLTRINKRVCFERVGVEWQLVRSCGRSWIQITYPLAPKKP 160
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|673050463|ref|XP_008879192.1| (hypothetical protein H310_13461 [Aphanomyces invadans] >gi|574465188|gb|ETV92228.1| hypothetical protein H310_13461 [Aphanomyces invadans]) HSP 1 Score: 110.923 bits (276), Expect = 2.223e-27 Identity = 49/134 (36.57%), Postives = 78/134 (58.21%), Query Frame = 0
Query: 10 PPESLARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPV 143
P + AR + L + FI+G+++ YD FP L+ +++E+ F +AI ++NN L YWPC C CGY+ T GLSL CP +C+ +AE++ + +E++N F+ + W L K +SWI I LP+
Sbjct: 3 PTMTAARKDRSRVFLMPQRMPFISGITNRYDDDFPIELDGLVTEAQFSQAINQINNTLTDYWPCLFCVCCGYLCCVCTAGLSLLCPNMCISDAEQYTRTLIERINARPCFKDADVEWKLVKKCCRSWIEISLPI 136
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|1214689694|gb|OWZ05182.1| (Golgin subfamily A protein [Phytophthora megakarya]) HSP 1 Score: 106.686 bits (265), Expect = 2.475e-26 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 0
Query: 24 LRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGP 148
L T +RF+ GV+ +Y+ FP L +++ E+ F AI ++NN + YWPC C LCGY P TLGLSL CP C+ +AE++ + L ++N F G+ W L +S +SWI I P+ + P
Sbjct: 32 LYPTRMRFVTGVARAYEDDFPFELSHLVKETDFEIAINQINNTMQDYWPCFLCILCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALLTRINKRVCFERAGVEWQLERSCGKSWIQIAYPLAPKKP 156
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|1173944501|gb|OQR93230.1| (hypothetical protein ACHHYP_20111 [Achlya hypogyna]) HSP 1 Score: 104.76 bits (260), Expect = 1.051e-25 Identity = 48/126 (38.10%), Postives = 72/126 (57.14%), Query Frame = 0
Query: 17 PRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELP 142
PR V L+ +RF+NG+S +YD FPP L+ + E+ F AI ++NN L YWPC C GY T GLSL CP +C+ +AE++ + ++++N F G+ W L K +S+I + P
Sbjct: 3 PRTTVRLM-PMHMRFVNGISRAYDDEFPPELQGRVDETQFTHAINQINNTLTDYWPCLFCVCYGYACCICTGGLSLLCPHMCISDAEQYARTLIDRINQRPCFEDAGVQWKLVKRCGRSYIEVSFP 127
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|698806740|ref|XP_009836399.1| (hypothetical protein H257_11218 [Aphanomyces astaci] >gi|574108787|gb|ETV74293.1| hypothetical protein H257_11218 [Aphanomyces astaci]) HSP 1 Score: 103.219 bits (256), Expect = 4.977e-25 Identity = 48/129 (37.21%), Postives = 78/129 (60.47%), Query Frame = 0
Query: 18 RKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAE 146
R+ V LL + F++G+++ YD FP LE ++ E+ F +AI ++NN L YWPC C CGY+ T GLSL CP +C+ +AE++ + ++++N F+ + W L K +SW+ I +PVK +
Sbjct: 7 RRRVFLL-PQRMPFVSGMTNRYDDEFPMELEGMVPEAHFAQAINQINNTLTDYWPCFFCVCCGYLCCICTGGLSLLCPYMCISDAEQYTRTLIDRINIRPCFKDADIQWKLVKRCCRSWVEISIPVKPQ 134
BLAST of EWM21448.1 vs. NCBI_GenBank
Match: gi|301115328|ref|XP_002905393.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110182|gb|EEY68234.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 100.523 bits (249), Expect = 9.000e-24 Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 0
Query: 24 LRATGLRFINGVSSSYDTTFPPVLENV-LSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGP 148
L T +RF+ GV+ +Y+ FP L ++ + E+ F AI ++NN + YWPC C CGY P TLGLSL CP C+ +AE++ + L ++N F G+ W L +S QSWI I P+ + P
Sbjct: 36 LYPTRVRFVTGVAQAYEDEFPSELSHLQVKEAEFEVAINQINNTMQDYWPCFFCICCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALLTRINKRLCFERAGVEWQLVRSWGQSWIQITYPLVLKKP 161 The following BLAST results are available for this feature:
BLAST of EWM21448.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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