rna9241, rna9241 (mRNA) Nannochloropsis gaditana

Overview
Namerna9241
Unique Namerna9241
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length480
Alignment locationKK037252.1:182647..183114 +

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Properties
Property NameValue
ProductGolgin subfamily A member 7/ERF4
Orig transcript idgnl|cribi|Naga_100019g31.470.mrna
Orig protein idgnl|cribi|Naga_100019g31.470
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:182647..183114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100019g31gene8963Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9241rna9241-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21448.1cds9211Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9241 ID=rna9241|Name=rna9241|organism=Nannochloropsis gaditana|type=mRNA|length=480bp
ATGCCGTCAATTAAAATTCTCTTTTTTGCAGCAGCCCGTGAATTAGTGGG
CGGTGTGCAGCAGGTGGATGTTGAGATCCAGCCTCGTGCAGATTCCAGTG
GCGTGCTGTACTTGAGAGACGTGCGGACCTATCTGGCCAGTGCTTTTCCT
GATTTGGACTCAATCATCGCTGATGTCACATTGGCCCTAAATATGCAGTA
TGTGGCGGCGGTTGAAAGCCTGCTCTGTGTGGATGCCCCGGGCATTCGGA
CTGAACGTTGCAAATCTGAGACTAGCGGATGTCTGGTGAACGTACTCAAC
TTCCACCCAAACGTTGTGGTGACACGCCACAGGGTGGAGGCTGGCCCGAG
GTGCCGTCAAGCCCTGCTTTGTTGCGCAGGAGGCGACATCGCCGTGTGCG
ACCCAGCCGTTGAGTCAAAGAGCAGGGTTGCCTCATTCGTGCCTCCTTCC
CTTCCCGCAGGCGACGCAGTGGGTCTCTGA
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protein sequence of rna9241

>rna9241-protein ID=rna9241-protein|Name=rna9241|organism=Nannochloropsis gaditana|type=polypeptide|length=155bp
MVFNAPRRAPPESLARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENV
LSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVG
EAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELPVKAEGPEG
DREER
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mRNA from alignment at KK037252.1:182647..183114+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9241 ID=rna9241|Name=rna9241|organism=Nannochloropsis gaditana|type=mRNA|length=468bp|location=Sequence derived from alignment at KK037252.1:182647..183114+ (Nannochloropsis gaditana)
ATGGTATTCAATGCACCGCGACGTGCGCCTCCTGAATCCCTGGCTCGACc
gcggaaggaggtggcCTTGCTGCGCGCAACTGGCCTTCGCTTTATCAACG
GCGTGAGCTCGTCCTACGACACAactttcccccccgtgctGGAGAACGTG
CTCAGTGAATCTGCTTTTATCGAGGCTATCGGGCGACTCAATAATGTCTT
GGCGATGTACTGGCCTTGTACGGCCTGCTTCCTGTGTGGCTATGTATTCA
GCCCCGTCACCCTCGGGCTGTCCCTGGCCTGTCCGCGTATATGTGTGGGT
GAAGCCGAGAAACATGGACAGCAAGAGCTGGAGCAGTTGAATCACTCTCA
TTTGTTTAGAAGTCTGGGGATGGTATGGGGACTGCGGAAGAGTCTCTTGC
AGTCGTGGATCGTGATCGAGTTGCCAGTGAAAGCGGAAGGTCCcgaagga
gacagggaggagcggTAG
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Coding sequence (CDS) from alignment at KK037252.1:182647..183114+

>rna9241 ID=rna9241|Name=rna9241|organism=Nannochloropsis gaditana|type=CDS|length=468bp|location=Sequence derived from alignment at KK037252.1:182647..183114+ (Nannochloropsis gaditana)
ATGGTATTCAATGCACCGCGACGTGCGCCTCCTGAATCCCTGGCTCGACc
gcggaaggaggtggcCTTGCTGCGCGCAACTGGCCTTCGCTTTATCAACG
GCGTGAGCTCGTCCTACGACACAactttcccccccgtgctGGAGAACGTG
CTCAGTGAATCTGCTTTTATCGAGGCTATCGGGCGACTCAATAATGTCTT
GGCGATGTACTGGCCTTGTACGGCCTGCTTCCTGTGTGGCTATGTATTCA
GCCCCGTCACCCTCGGGCTGTCCCTGGCCTGTCCGCGTATATGTGTGGGT
GAAGCCGAGAAACATGGACAGCAAGAGCTGGAGCAGTTGAATCACTCTCA
TTTGTTTAGAAGTCTGGGGATGGTATGGGGACTGCGGAAGAGTCTCTTGC
AGTCGTGGATCGTGATCGAGTTGCCAGTGAAAGCGGAAGGTCCcgaagga
gacagggaggagcggTAG
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Synonyms
Publications