CDPK1, gene8945 (gene) Nannochloropsis gaditana

Overview
NameCDPK1
Unique Namegene8945
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:134746..137705 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100019g49
Gene biotypeprotein_coding
GeneCDPK1
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:134746..137705 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL078ngnoL078Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL077ngnoL077Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL076ngnoL076Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01280NO22G01280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9221rna9221-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9222rna9222-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9221rna9221Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9222rna9222Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9221

>rna9221-protein ID=rna9221-protein|Name=rna9221|organism=Nannochloropsis gaditana|type=polypeptide|length=519bp
MVRVVRHLTTGNTYAMKTLHLNRLKSKASLADLRNEVRIMSELDHPNIVQ
LYETFETDDHIFLIMELCTGGELLDKLHRQEGHHYSEQIASQLVKKMVGA
IRYCHDHHIAHRDLKLENFLFENEGADAELKLIDFGLSRHYRDDQRMHRP
VGTPYYVDPSVLEGSYTQECDMWSIGVIAYMLLSGRPPFYGDTDNETLIR
VRAGKFSFPPSAFHQVSAQAKDFISRLLVVDHTRRMTARQAQAHPWLHSW
DQSPEPLHVDILGSLRNFHEFSTLKKVAMEVVAFSLRSEQIKDLRREFEK
VDLDSNGEITLEELSQALEASGLLSPGDLETLVQGLDVAHQHAGTISWHE
FLAATMDAALLDEEHIQLAFQRIDSDRTGYISQSNFGELVGADMTIEQVQ
EVFAEVDTDGDGKISYEEFVSLMKGTPPAPTNTMASGHALVDKAFSKRNL
RHQRHRSIHAASESSITTSHSNSGSSNTLSVSSPGCRHRRLHRLRHSIQH
LVDVATNSPTRQAHAASHP
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protein sequence of rna9222

>rna9222-protein ID=rna9222-protein|Name=rna9222|organism=Nannochloropsis gaditana|type=polypeptide|length=583bp
MGCLYSSPAGVPHTYRESDMEKSAHVRRKTQHLIQNLVHEEYRLKVDEVY
DVGKGKILGTGISGMVRVVRHLTTGNTYAMKTLHLNRLKSKASLADLRNE
VRIMSELDHPNIVQLYETFETDDHIFLIMELCTGGELLDKLHRQEGHHYS
EQIASQLVKKMVGAIRYCHDHHIAHRDLKLENFLFENEGADAELKLIDFG
LSRHYRDDQRMHRPVGTPYYVDPSVLEGSYTQECDMWSIGVIAYMLLSGR
PPFYGDTDNETLIRVRAGKFSFPPSAFHQVSAQAKDFISRLLVVDHTRRM
TARQAQAHPWLHSWDQSPEPLHVDILGSLRNFHEFSTLKKVAMEVVAFSL
RSEQIKDLRREFEKVDLDSNGEITLEELSQALEASGLLSPGDLETLVQGL
DVAHQHAGTISWHEFLAATMDAALLDEEHIQLAFQRIDSDRTGYISQSNF
GELVGADMTIEQVQEVFAEVDTDGDGKISYEEFVSLMKGTPPAPTNTMAS
GHALVDKAFSKRNLRHQRHRSIHAASESSITTSHSNSGSSNTLSVSSPGC
RHRRLHRLRHSIQHLVDVATNSPTRQAHAASHP
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Synonyms
Publications