EWM21537.1, cds9136 (CDS) Nannochloropsis gaditana

Overview
NameEWM21537.1
Unique Namecds9136
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:475137..475376 +
Alignment locationKK037251.1:475444..475446 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21537.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103444g1.2222.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:475137..475376 +
KK037251.1supercontigKK037251.1:475444..475446 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21537.1 vs. NCBI_GenBank
Match: gi|585101777|gb|EWM21537.1| (hypothetical protein Naga_103444g1 [Nannochloropsis gaditana])

HSP 1 Score: 167.933 bits (424), Expect = 7.158e-53
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:    1 MQQEGLTCRPDHAQILMSFYNQMAKYSVSLLVFQALEPGEGGNKDPAVARLALEACGRSGLWEDGEEIVRDMEWSREDKE 80
            MQQEGLTCRPDHAQILMSFYNQMAKYSVSLLVFQALEPGEGGNKDPAVARLALEACGRSGLWEDGEEIVRDMEWSREDKE
Sbjct:    1 MQQEGLTCRPDHAQILMSFYNQMAKYSVSLLVFQALEPGEGGNKDPAVARLALEACGRSGLWEDGEEIVRDMEWSREDKE 80
The following BLAST results are available for this feature:
BLAST of EWM21537.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101777|gb|EWM21537.1|7.158e-53100.00hypothetical protein Naga_103444g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9166rna9166Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications