EWM21541.1, cds9133 (CDS) Nannochloropsis gaditana

Overview
NameEWM21541.1
Unique Namecds9133
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:467039..467046 +
Alignment locationKK037251.1:467202..467393 +
Alignment locationKK037251.1:467583..467691 +
Alignment locationKK037251.1:467953..468261 +

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Properties
Property NameValue
Protein idEWM21541.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100798g1.5009.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:467039..467046 +
KK037251.1supercontigKK037251.1:467202..467393 +
KK037251.1supercontigKK037251.1:467583..467691 +
KK037251.1supercontigKK037251.1:467953..468261 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21541.1 vs. NCBI_GenBank
Match: gi|585101785|gb|EWM21541.1| (hypothetical protein Naga_100798g1 [Nannochloropsis gaditana])

HSP 1 Score: 403.675 bits (1036), Expect = 3.971e-142
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 
Query:    1 MYSFTLSTTLRSGRHEIGFHGRVRHVPRGRALRGRGNLGRGGRGERQQAPWTGFDAASHAPGLRSFRGNLRTDPEPTSRGSRAGRDGRDPRPRLQAPTFARQEGGLDMVPESGRDSGSAFDPGWPFCGAHDSPHFFLRPYIPLIWSLPGTDTSARTLLPASVPTRVLGASSRAGPLLFWPCIDLLVHRPASRSSLASLVTSHVEG 205
            MYSFTLSTTLRSGRHEIGFHGRVRHVPRGRALRGRGNLGRGGRGERQQAPWTGFDAASHAPGLRSFRGNLRTDPEPTSRGSRAGRDGRDPRPRLQAPTFARQEGGLDMVPESGRDSGSAFDPGWPFCGAHDSPHFFLRPYIPLIWSLPGTDTSARTLLPASVPTRVLGASSRAGPLLFWPCIDLLVHRPASRSSLASLVTSHVEG
Sbjct:    1 MYSFTLSTTLRSGRHEIGFHGRVRHVPRGRALRGRGNLGRGGRGERQQAPWTGFDAASHAPGLRSFRGNLRTDPEPTSRGSRAGRDGRDPRPRLQAPTFARQEGGLDMVPESGRDSGSAFDPGWPFCGAHDSPHFFLRPYIPLIWSLPGTDTSARTLLPASVPTRVLGASSRAGPLLFWPCIDLLVHRPASRSSLASLVTSHVEG 205
[Close]
BLAST of EWM21541.1 vs. NCBI_GenBank
Match: gi|553182284|ref|XP_005853708.1| (hypothetical protein NGA_0493700, partial [Nannochloropsis gaditana CCMP526] >gi|422295354|gb|EKU22653.1| hypothetical protein NGA_0493700, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 206.838 bits (525), Expect = 2.418e-63
Identity = 108/122 (88.52%), Postives = 109/122 (89.34%), Query Frame = 0 
Query:   84 GRDGRDPRPRLQAPTFARQEGGLDMVPESGRDSGSAFDPGWPFCGAHDSPHFFLRPYIPLIWSLPGTDTSARTLLPASVPTRVLGASSRAGPLLFWPCIDLLVHRPASRSSLASLVTSHVEG 205
            G +G  P PR      A   GGLDMVPESGRDSGSAFDPGWPFCGAHDSPHFFLRPYIPLIWSLPGTDTSARTLLPASVPTRVLGASSRAGPLLFWPCIDLLVHRPASRSSLASLVTSHVEG
Sbjct:  164 GSEGMTPCPRR---ARAASLGGLDMVPESGRDSGSAFDPGWPFCGAHDSPHFFLRPYIPLIWSLPGTDTSARTLLPASVPTRVLGASSRAGPLLFWPCIDLLVHRPASRSSLASLVTSHVEG 282

HSP 2 Score: 154.836 bits (390), Expect = 4.486e-43
Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 0 
Query:   11 RSGRHEIGFHGRVRHVPRGRALRGRGNLGRGGRGERQQAPWTGFDAASHAPGLRSFRGNLRTDPEPTSRGSRAGRDGRDPRPRLQAPTFARQE---GGLDMVPESGR 114
            RSGRHEIGFHGRVRHVPRGRALRGRGNLGRGGRGERQQAPWTGFDAASHAPGLRSFRGNLRTDPEPTSRGSRAGRDGRDPRPRLQAPTFARQE    G D +P  GR
Sbjct:    1 RSGRHEIGFHGRVRHVPRGRALRGRGNLGRGGRGERQQAPWTGFDAASHAPGLRSFRGNLRTDPEPTSRGSRAGRDGRDPRPRLQAPTFARQEVGRHGFDGLPHEGR 107
The following BLAST results are available for this feature:
BLAST of EWM21541.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101785|gb|EWM21541.1|3.971e-142100.00hypothetical protein Naga_100798g1 [Nannochloropsi... [more]
gi|553182284|ref|XP_005853708.1|2.418e-6388.52hypothetical protein NGA_0493700, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9163rna9163Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications