rna9163, rna9163 (mRNA) Nannochloropsis gaditana

Overview
Namerna9163
Unique Namerna9163
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2059
Alignment locationKK037251.1:467039..468261 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100798g1.5009.mrna
Orig protein idgnl|cribi|Naga_100798g1.5009
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:467039..468261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100798g1gene8888Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9163rna9163-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21541.1cds9133Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9163 ID=rna9163|Name=rna9163|organism=Nannochloropsis gaditana|type=mRNA|length=2059bp
TCAAGCAGCAAATCCCGCCGTACCCCCCCTTGTCTCTTGCTGCCCCCTGC
ACGCTACGAGTACATTTTAGCGAGATAGCAAGGGCACTAAGGCATGATAG
ACACATATCCACGGCAAATTTCAAAGAATAGGGCTGGTTCTTGAGGTCAG
ACTCGCCTGTTTTCGTTCTCGATCGTTACGAGGATGCCAAAGAAAGCCGA
GCACACCACAGGCGTGCTGTGTTGGGAAAAGACGCCGTTCTGTTGTGTTG
GTCGCGTGTGCATTCAAGCCATGCTCACTCGATAGAGCGAACTATCTAGT
GATGCTCTCTCGATGGCAAAGCCTTTCTTTTACATGTCGATGGTCGTGGA
AATGGCTGGCTTGTTTCTTCCCCCCCTTAGGTTCTCAACGGGCTTGGACG
TGTGCGTTCCCTGGCAGTTACGAGGCGGAAACGAAGTGCACGAGACGCAA
AGTAAAAATGCCTGTGTCGATTCAACCCTGCAATCAAGACACAGGCATGG
TGCTTGTTTGCGATGCAGAGATGGTTGCATACGAGGGAAAGACGAGAAAG
CTGCGTTGCAGCGTTTGCCCCATCTCCCGCCTATGGGCCAAAAAGGCGCG
TGAGTCTCCAGGCTCGCTGCAGGAGGACGGGAGGTTTCTCTATTCCTTAT
GAACATGAGAAGGGGATCAAGGCAATGGAGTGGTTGTGACCAAAGGAGAA
CATGTGTACAGAATGCTAGATCTGACTACCATGGCAACAGGGTGACCCCT
AAGCCCCTTTGCTCCGATGCATGCTTTGTAGGTCAGGAAACCGAGCGAAA
GGGAGGGGGAAGCCTGGAAAGCCTGTCTCGACACGATCGTGCAGACCGTG
ACACGGCATGTGGACTAGGAAGCAATGGCTACGCATGGTCCGACATGATG
CACAGCCGGTGCACTACTTTCCTTTCAGCGCACAAGCGCCTTTATTTTGG
CATGCAGTAATTATGCTTTATCTCTCACTAGCATGATCAAATCGAGGTGT
TGTTGTTGGAAGCATCTACGATGGTGCCTGGTACCTGTGCGGTCAGGAAT
CCTTGAGGTCTCTTCTTGTAGATAGACGTGTTTTCTTCTTTCTAGGTTTC
CATGTCATATAGTCAACCTCGTGAACGACTCAGGGGCATTAGCAAACAGA
CGAGGAGGAGGAAACAGATGTGTGTATATGTAGCATGTGGATGTGTGCAT
ATATATAGACCTCACAAACGGGAAATTCGTCGCTCGACCTAAGCATTGCT
ACTGAGCTTCTTGCGCTCAGCGGCAGCAGCGACTCTTCGCTGCTTGATCC
TGCCCTTCTCTCTTCTCCTCCCTTCCTTCCTAACAAGGAAGGAGAGGGAG
GGGCAGGTTGAGGCAGCGAAGAGTTGCTGCTACCGCTGAGCGCAAGGAGC
TCAGTCGATACGTCTGTTTGTGCGATCTCCTTTATAGGCAACACGCAATT
TGTTCTTGGTTTTCCGTTTCTTATTGTGCTTCCTCCTCTTTGTTTTTTTC
ATCTTTCTCCTCCTCTTCCCTTACAGCTCCTCCCTCGAAAGAAGGGCGCA
AGGCTGTATACCCTCATGCATTATGTGTATGTGTATCTGTTAAGTCGCTT
GTTCTGCTCGTTGAAGTCGAAAGTGAGTGAGGATGGTATTGGCTGTTTCG
ACGTGGTGACATCGAGGAAATTTCCCTGAGGAGAGAACGAATTGAAAAAG
CGCCCTCATCTTGTGACGCATGCGAAGAGGAGCATCAAGTCGAAGGGGAG
TGAGGGCAAGAGAAATCATGCGAGGAGGGAAGTCATGCACTGGGATAGTC
GTGCCGTGTATGAATCATTAATGTTTCCGAAAGTATCCCCCTTCGTTCGG
GGAGGGGAATTTCGGGCAATGTTAGAGGGCGGGGCTTCATCTTGAGAAGG
TGTCTGCCCTTGTCTTAAGAATAACCTCCTCAATCGTCATTATAAAATGT
GGCGTCGATGGAAGGGGAGCATCCGTGTGGGAAGGAGCACTCGCCAAGCA
TAAGGATCAAGAATCGAAGAGGCCACCTACAAGAAAGAAGAAAGAAAAAT
GAAGATGCG
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protein sequence of rna9163

>rna9163-protein ID=rna9163-protein|Name=rna9163|organism=Nannochloropsis gaditana|type=polypeptide|length=205bp
MYSFTLSTTLRSGRHEIGFHGRVRHVPRGRALRGRGNLGRGGRGERQQAP
WTGFDAASHAPGLRSFRGNLRTDPEPTSRGSRAGRDGRDPRPRLQAPTFA
RQEGGLDMVPESGRDSGSAFDPGWPFCGAHDSPHFFLRPYIPLIWSLPGT
DTSARTLLPASVPTRVLGASSRAGPLLFWPCIDLLVHRPASRSSLASLVT
SHVEG
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mRNA from alignment at KK037251.1:467039..468261+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9163 ID=rna9163|Name=rna9163|organism=Nannochloropsis gaditana|type=mRNA|length=1223bp|location=Sequence derived from alignment at KK037251.1:467039..468261+ (Nannochloropsis gaditana)
ATGTACTCGTAGCGTGCAGGGGGCAGCAAGAGACAAGGGGGGGTACGGCG
GGATTTGCTGCTTGAAGGGACTGGACGAAGCGTGCTGTGACGGAGACTCG
CCATGGGCCCTCGCTCCTTTTGCGGGAGAGCAGCCTGTCCTCGTGACACC
GTTACACACACAGATTCACGCTTTCCACCACGCTTAGAAGCGGGAGGCAT
GAAATAGGCTTCCATGGTCGTGTGAGACATGTGCCCCGTGGACGTGCCCT
GCGTGGGCGAGGCAACTtggggcgtggggggagaggagagagacagCAGG
CGCCTTGGACGGGGTTCGACGCAGCGTCACACGCACCGGGTCTGAGGTCC
TTCCGGTGAGTCTTTGCCATGCTCAGGCGCGTCGAAGGAGGACGATAGAG
CCATTCAAAGTCGCATGCTTGGGATGGGTCGAGACGGGAGAGACACGGGG
TTGAGGGGGGGCATCGGGCAGTTCCCAAAGGCCGTGCCCGGCACATGACC
AAGCAAGCCCTCATCCCTGTCGTCCCCAACCCCCCCATCCACAGAGGCAA
CCTTCGTACCGACCCCGAGCCGACGTCACGAGGCAGTCGAGCAGGGCGAG
ATGGCAGGGACCCTCGACCGCGCCTGCAAGCTCCGACCTTcgcgaggcag
gaggttggaaGGCATGGCTTCGATGGCCTGCCGCATGAAGGACGCTCGAG
GGCATGGGTGGGAGGATCCCAAGCGTCCCCAGTCTATATCAGCGTCACAG
AGGGGGGCGCTGGCAAGGCTGATGCGACGTGTCGACGAGGCAGGCCCTCG
CTTCCGCCGggtgcccctccttcctcgcggTGCGCTCTTTGGGTGATGAa
tcaagagggaagagggtcaGAGGGAATGACTCCGTGTCCAAGACGGGCCC
GTGCAGCCTCCTAGGGGGGACTCGACATGGTTCCAGAGTCAGGCAGAGAC
TCAGGGAGCGCCTTTGACCCCGGATGGCCTTTTTGTGGCGCGCATGATAG
TCCTCATTTCTTCCTGCGTCCGTACATTCCTCTGATCTGGTCACTTCCAG
GCACAGACACGAGCGCAAGAACCCTGCTGCCTGCGTCCGTTCCGACTCGA
GTCCTAGGAGCGAGCAGCAGGGCCGGGCCTCTCCTCTTTTGGCCCTGCAT
CGACCTCCTGGTCCACAGGCCCGCGTCCCGGTCGTCATTAGCCTCGTTGG
TGACGTCACACGTCGAGGGTTGA
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Coding sequence (CDS) from alignment at KK037251.1:467039..468261+

>rna9163 ID=rna9163|Name=rna9163|organism=Nannochloropsis gaditana|type=CDS|length=2472bp|location=Sequence derived from alignment at KK037251.1:467039..468261+ (Nannochloropsis gaditana)
ATGTACTCATTCACGCTTTCCACCACGCTTAGAAGCGGGAGGCATGAAAT
AGGCTTCCATGGTCGTGTGAGACATGTGCCCCGTGGACGTGCCCTGCGTG
GGCGAGGCAACTtggggcgtggggggagaggagagagacagCAGGCGCCT
TGGACGGGGTTCGACGCAGCGTCACACGCACCGGGTCTGAGGTCCTTCCG
AGGCAACCTTCGTACCGACCCCGAGCCGACGTCACGAGGCAGTCGAGCAG
GGCGAGATGGCAGGGACCCTCGACCGCGCCTGCAAGCTCCGACCTTcgcg
aggcaggagGGGGGACTCGACATGGTTCCAGAGTCAGGCAGAGACTCAGG
GAGCGCCTTTGACCCCGGATGGCCTTTTTGTGGCGCGCATGATAGTCCTC
ATTTCTTCCTGCGTCCGTACATTCCTCTGATCTGGTCACTTCCAGGCACA
GACACGAGCGCAAGAACCCTGCTGCCTGCGTCCGTTCCGACTCGAGTCCT
AGGAGCGAGCAGCAGGGCCGGGCCTCTCCTCTTTTGGCCCTGCATCGACC
TCCTGGTCCACAGGCCCGCGTCCCGGTCGTCATTAGCCTCGTTGGTGACG
TCACACGTCGAGGGTTGAATGTACTCATTCACGCTTTCCACCACGCTTAG
AAGCGGGAGGCATGAAATAGGCTTCCATGGTCGTGTGAGACATGTGCCCC
GTGGACGTGCCCTGCGTGGGCGAGGCAACTtggggcgtggggggagagga
gagagacagCAGGCGCCTTGGACGGGGTTCGACGCAGCGTCACACGCACC
GGGTCTGAGGTCCTTCCGAGGCAACCTTCGTACCGACCCCGAGCCGACGT
CACGAGGCAGTCGAGCAGGGCGAGATGGCAGGGACCCTCGACCGCGCCTG
CAAGCTCCGACCTTcgcgaggcaggagGGGGGACTCGACATGGTTCCAGA
GTCAGGCAGAGACTCAGGGAGCGCCTTTGACCCCGGATGGCCTTTTTGTG
GCGCGCATGATAGTCCTCATTTCTTCCTGCGTCCGTACATTCCTCTGATC
TGGTCACTTCCAGGCACAGACACGAGCGCAAGAACCCTGCTGCCTGCGTC
CGTTCCGACTCGAGTCCTAGGAGCGAGCAGCAGGGCCGGGCCTCTCCTCT
TTTGGCCCTGCATCGACCTCCTGGTCCACAGGCCCGCGTCCCGGTCGTCA
TTAGCCTCGTTGGTGACGTCACACGTCGAGGGTTGAATGTACTCATTCAC
GCTTTCCACCACGCTTAGAAGCGGGAGGCATGAAATAGGCTTCCATGGTC
GTGTGAGACATGTGCCCCGTGGACGTGCCCTGCGTGGGCGAGGCAACTtg
gggcgtggggggagaggagagagacagCAGGCGCCTTGGACGGGGTTCGA
CGCAGCGTCACACGCACCGGGTCTGAGGTCCTTCCGAGGCAACCTTCGTA
CCGACCCCGAGCCGACGTCACGAGGCAGTCGAGCAGGGCGAGATGGCAGG
GACCCTCGACCGCGCCTGCAAGCTCCGACCTTcgcgaggcaggagGGGGG
ACTCGACATGGTTCCAGAGTCAGGCAGAGACTCAGGGAGCGCCTTTGACC
CCGGATGGCCTTTTTGTGGCGCGCATGATAGTCCTCATTTCTTCCTGCGT
CCGTACATTCCTCTGATCTGGTCACTTCCAGGCACAGACACGAGCGCAAG
AACCCTGCTGCCTGCGTCCGTTCCGACTCGAGTCCTAGGAGCGAGCAGCA
GGGCCGGGCCTCTCCTCTTTTGGCCCTGCATCGACCTCCTGGTCCACAGG
CCCGCGTCCCGGTCGTCATTAGCCTCGTTGGTGACGTCACACGTCGAGGG
TTGAATGTACTCATTCACGCTTTCCACCACGCTTAGAAGCGGGAGGCATG
AAATAGGCTTCCATGGTCGTGTGAGACATGTGCCCCGTGGACGTGCCCTG
CGTGGGCGAGGCAACTtggggcgtggggggagaggagagagacagCAGGC
GCCTTGGACGGGGTTCGACGCAGCGTCACACGCACCGGGTCTGAGGTCCT
TCCGAGGCAACCTTCGTACCGACCCCGAGCCGACGTCACGAGGCAGTCGA
GCAGGGCGAGATGGCAGGGACCCTCGACCGCGCCTGCAAGCTCCGACCTT
cgcgaggcaggagGGGGGACTCGACATGGTTCCAGAGTCAGGCAGAGACT
CAGGGAGCGCCTTTGACCCCGGATGGCCTTTTTGTGGCGCGCATGATAGT
CCTCATTTCTTCCTGCGTCCGTACATTCCTCTGATCTGGTCACTTCCAGG
CACAGACACGAGCGCAAGAACCCTGCTGCCTGCGTCCGTTCCGACTCGAG
TCCTAGGAGCGAGCAGCAGGGCCGGGCCTCTCCTCTTTTGGCCCTGCATC
GACCTCCTGGTCCACAGGCCCGCGTCCCGGTCGTCATTAGCCTCGTTGGT
GACGTCACACGTCGAGGGTTGA
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Synonyms
Publications