rna9144, rna9144 (mRNA) Nannochloropsis gaditana

Overview
Namerna9144
Unique Namerna9144
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1570
Alignment locationKK037251.1:433219..433991 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100559g3.1314.mrna
Orig protein idgnl|cribi|Naga_100559g3.1314
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:433219..433991 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100559g3gene8867Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9144rna9144-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21559.1cds9114Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9144 ID=rna9144|Name=rna9144|organism=Nannochloropsis gaditana|type=mRNA|length=1570bp
GCTCTATTGAGTTGGTTTGAAGATGGTACGTGAGAAAAGGAGACCTGAAT
GACCAGTTATGCGCCCTCGTGGAACACGAGCATGCATCGCCCTGCTTCAA
GACAGTGACGTCAGCCTCTACCAGAACGCAACATGTCCTCGTTTTCCTAC
ATGCACGCTCTTGAGCAGCCCCATTCTTGACTCGACCTTACTTGCACACG
TTCTATCGGTATCAATCAAGAGCCTGGCTGCAAAGATGAGTGTTGTAATA
TTAGGCGCGACTGGTAACGTCGGCCGTCACATCGTGCAGGCATTGCTCGA
CCTGGGCGGGAGCCTCGTGACCCAAATCGTAGCTTGCACTAGACAGCCCC
TTTCCGGGCCTGCCATGGCCCTCAAAGTTGCTGCAAATTCCTCACGCACA
AGATTATGCCTGGCCAAGGTGGACATGATGACCTCCGACGTGGACTCCCT
CGCCGCGATCCTCTCCGGGCACGAGGTGGTGGTCCTGGTCATGGCCCAAG
GTCTCTCGCCCGAGGAGATGGTTGGCTGCCAAAAGGAAGTGGCTGAAGCG
CTGTCGCGAGGGATGGACAAGCACGAGAAGCAGCCCTCCGGAAATCCGCC
TCTCTTGGTGAAGTTGTCGTCCTACGGCATCGATGGGCCGCTGTCTCAAG
GCCCTTTGGGGGATGCACATCGAAGGGGGGAAGATCTCTTCCGGAGCAAG
AACCTCCCGTTCGTCTCGCTCCGCCCCACTTCCTTCTTTTCCAACTTCGA
GGCTTACGACTGGCCGTCCTTGCGGGCCGGGGGCCGCGTGATCAGGAGTC
CCTTGGGCCCTCACGCGCGCGTCAATTGGGTAGCGTGTCAAGACATCGGG
CGGGTGGCTGCGGCGGTGATCCAGGAGCATCTGGAAACATTGGGCAATGG
ACGCCAGGCATCTATACCAGTCTTTCGGAAGGTGGACGTGGTAGGGCCCG
AGGGCAACACGCTGAGCGCGCCGGAGGTGTGCCGCGTGGTGGGGGAGTGC
CTGAAAAAAGAAGGCACGGGCCCCGGGGATGTTGAGCGGGAGGTGCGCTA
CGAAGAGACACCCTTACCGACGACGGAGGCCTATCGAGGTCTGTGGACCT
TTTTGAGAGCGGGCGGCTTTGACGTGGCGGATGGCCCGGGGAGCGAGAGC
GGACGGCTGCTGGGAGGGAAGGCGATGACGGGGTTCCGCGACTATATCGA
GGGCCTGGTGGAGGGGATGGGCGAGGCAGAGACACGGGGCCTCCCGCTGA
ATTGAAGGGGGAGGGGGAAGCCTCGCGAATAGGGACTCTTTTCCGAGGGC
TCAACAGCCTCAAGACCGCAAAGCCGACTCAATACAAAGAAGACTTCCCA
AGCCTTTGCTCGTCATGGGACGCCTCGATGTCCCTTTCCTAATCACGTGT
ATAGATTTTCATTTGCATAGAATGATGAGGCCCACTGTCGTATCACTCAT
CACGCCTTGGAAATAGAGGCACTGTCTATTACGAGCGTTATCTATTGCCA
ATACGAAAGCGGGATTATTGTTTACGTTGAACCAAACATGTAATAAAAGA
CAGAAAACCCGTAGCGATCA
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protein sequence of rna9144

>rna9144-protein ID=rna9144-protein|Name=rna9144|organism=Nannochloropsis gaditana|type=polypeptide|length=212bp
MRGAGSLLAKASVHRPFGLRRFATETLSSFPSESTLPSSQQASEATQAAF
TGQSRKQLQEYHALVRIAEVAEALRSGYQDGTCASPIDEELRSLLRATRA
RPSLLTPLGSSVGILLRHLPIPSNTIVGDVGIGLRASLKEALDSNVRRLV
EVERARGSRGGTSASALKRFMKEKRDGLGMDGEDAGSEDGAGVLAQGTKV
VCSALLWGAKRL
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mRNA from alignment at KK037251.1:433219..433991+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9144 ID=rna9144|Name=rna9144|organism=Nannochloropsis gaditana|type=mRNA|length=773bp|location=Sequence derived from alignment at KK037251.1:433219..433991+ (Nannochloropsis gaditana)
GGCGCATAACTGGTCATTCAGGTCTCCTTTTCTCACGTACCATCTTCAAA
CCAACTCAATAGAGCACTATCTGCACAGCATGCGCGGCGCGGGCTCTCTA
TTGGCTAAAGCCAGCGTCCACCGGCCATTCGGCCTTCGCCGCTTCGCGAC
CGAGACGCTttcatcttttccctccgagTCAACACTTCCATCTTCACAAC
AAGCCTCAGAGGCAACTCAGGCCGCATTCACGGGACAATCTCGCAAGCAA
TTACAAGAGTACCACGCACTCGTGCGGATTGCCGAGGTCGCTGAGGCCCT
TCGGTCTGGATATCAAGATGGTACATGTGCATCCCCTATAGACGAGGAGC
TCCGGTCTCTCCTCCGCGCCACGCGCGCACGACCTTCCTTATTGACGCCC
CTAGGCAGTAGTGTAGGGATTTTGCTGCGTCATTTGCCAATCCCATCGAA
CACAATCGTAGGCGACGTTGGAATAGGGTTGAGGGCCTCGCTGAAGGAGG
CTCTGGACTCGAACGTGAGGcgcctggtggaggtggaacgAGCTCGAGGA
TCACGGGGGGGGACCTCGGCGTCCGCGCTCAAAAGATTCATGAAAGAGAA
ACGGGATGGTTTGGGAatggatggagaggatgcgggtagcgaggacgggg
ccgGGGTGTTGGCGCAAGGCACCAAGGTTGTGTGCAGTGCCCTCCTGTGG
GGGGCTAAGCGTCTGTAATGAAGCAAGAGCGGTGCATGGCCCTATGTCGC
CATCGACAGCAACGAATGCGAAA
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Coding sequence (CDS) from alignment at KK037251.1:433219..433991+

>rna9144 ID=rna9144|Name=rna9144|organism=Nannochloropsis gaditana|type=CDS|length=639bp|location=Sequence derived from alignment at KK037251.1:433219..433991+ (Nannochloropsis gaditana)
ATGCGCGGCGCGGGCTCTCTATTGGCTAAAGCCAGCGTCCACCGGCCATT
CGGCCTTCGCCGCTTCGCGACCGAGACGCTttcatcttttccctccgagT
CAACACTTCCATCTTCACAACAAGCCTCAGAGGCAACTCAGGCCGCATTC
ACGGGACAATCTCGCAAGCAATTACAAGAGTACCACGCACTCGTGCGGAT
TGCCGAGGTCGCTGAGGCCCTTCGGTCTGGATATCAAGATGGTACATGTG
CATCCCCTATAGACGAGGAGCTCCGGTCTCTCCTCCGCGCCACGCGCGCA
CGACCTTCCTTATTGACGCCCCTAGGCAGTAGTGTAGGGATTTTGCTGCG
TCATTTGCCAATCCCATCGAACACAATCGTAGGCGACGTTGGAATAGGGT
TGAGGGCCTCGCTGAAGGAGGCTCTGGACTCGAACGTGAGGcgcctggtg
gaggtggaacgAGCTCGAGGATCACGGGGGGGGACCTCGGCGTCCGCGCT
CAAAAGATTCATGAAAGAGAAACGGGATGGTTTGGGAatggatggagagg
atgcgggtagcgaggacggggccgGGGTGTTGGCGCAAGGCACCAAGGTT
GTGTGCAGTGCCCTCCTGTGGGGGGCTAAGCGTCTGTAA
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Synonyms
Publications