EWM21559.1, cds9114 (CDS) Nannochloropsis gaditana

Overview
NameEWM21559.1
Unique Namecds9114
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:433298..433936 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21559.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100559g3.1314.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:433298..433936 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21559.1 vs. NCBI_GenBank
Match: gi|553178756|ref|XP_005852599.1| (hypothetical protein NGA_0711800 [Nannochloropsis gaditana CCMP526] >gi|422295931|gb|EKU23230.1| hypothetical protein NGA_0711800 [Nannochloropsis gaditana CCMP526] >gi|585101813|gb|EWM21559.1| hypothetical protein Naga_100559g3 [Nannochloropsis gaditana])

HSP 1 Score: 421.009 bits (1081), Expect = 7.418e-149
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0 
Query:    1 MRGAGSLLAKASVHRPFGLRRFATETLSSFPSESTLPSSQQASEATQAAFTGQSRKQLQEYHALVRIAEVAEALRSGYQDGTCASPIDEELRSLLRATRARPSLLTPLGSSVGILLRHLPIPSNTIVGDVGIGLRASLKEALDSNVRRLVEVERARGSRGGTSASALKRFMKEKRDGLGMDGEDAGSEDGAGVLAQGTKVVCSALLWGAKRL 212
            MRGAGSLLAKASVHRPFGLRRFATETLSSFPSESTLPSSQQASEATQAAFTGQSRKQLQEYHALVRIAEVAEALRSGYQDGTCASPIDEELRSLLRATRARPSLLTPLGSSVGILLRHLPIPSNTIVGDVGIGLRASLKEALDSNVRRLVEVERARGSRGGTSASALKRFMKEKRDGLGMDGEDAGSEDGAGVLAQGTKVVCSALLWGAKRL
Sbjct:    1 MRGAGSLLAKASVHRPFGLRRFATETLSSFPSESTLPSSQQASEATQAAFTGQSRKQLQEYHALVRIAEVAEALRSGYQDGTCASPIDEELRSLLRATRARPSLLTPLGSSVGILLRHLPIPSNTIVGDVGIGLRASLKEALDSNVRRLVEVERARGSRGGTSASALKRFMKEKRDGLGMDGEDAGSEDGAGVLAQGTKVVCSALLWGAKRL 212
The following BLAST results are available for this feature:
BLAST of EWM21559.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553178756|ref|XP_005852599.1|7.418e-149100.00hypothetical protein NGA_0711800 [Nannochloropsis ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9144rna9144Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications